RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 RBL1P28749 1068 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 PPM1FP49593 454 aaPredicted RBP12.27□□□□□ -0.45
CBWD3-208ENST00000612050 WNT3AP56704 352 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 LRP8Q14114 963 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 GUSBP11Q6P575 273 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 RBM44Q6ZP01 1051 aaKnown RBP12.27□□□□□ -0.45
CBWD3-208ENST00000612050 B4GALNT4Q76KP1 1039 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 LYSMD3Q7Z3D4 306 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 SLC35F3Q8IY50 421 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 ZNF567Q8N184 647 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 LRRC57Q8N9N7 239 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 IPMKQ8NFU5 416 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 SCAMP4Q969E2 229 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 FRMD8Q9BZ67 464 aaPredicted RBP12.27□□□□□ -0.45
CBWD3-208ENST00000612050 TMEM168Q9H0V1 697 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 VPS18Q9P253 973 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 SUFUQ9UMX1 484 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 SHOC2Q9UQ13 582 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 PKP3Q9Y446 797 aa12.27□□□□□ -0.45
CBWD3-208ENST00000612050 GPR89AB7ZAQ6 455 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 SLC25A14O95258 325 aaPredicted RBP12.26□□□□□ -0.45
CBWD3-208ENST00000612050 FGF1P05230 155 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 CEACAM5P06731 702 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 GPR89BP0CG08 455 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 GLB1P16278 677 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 DCDC1P59894 354 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 PDE1BQ01064 536 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 WASHC5Q12768 1159 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 GTF2H3Q13889 308 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 C14orf28Q4W4Y0 310 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 ARHGEF18Q6ZSZ5 1173 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 GLT6D1Q7Z4J2 308 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 PHYKPLQ8IUZ5 450 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 LSMEM2Q8N112 164 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 DCBLD1Q8N8Z6 715 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 KYQ8NBH2 561 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 ZDHHC1Q8WTX9 485 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 TTC25Q96NG3 672 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 CCDC3Q9BQI4 270 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 ZCCHC2Q9C0B9 1178 aaKnown RBP12.26□□□□□ -0.45
CBWD3-208ENST00000612050 ZMYND15Q9H091 742 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 GBA3Q9H227 469 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 ZNHIT2Q9UHR6 403 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 SLC17A4Q9Y2C5 497 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 ADGRG1Q9Y653 693 aa12.26□□□□□ -0.45
CBWD3-208ENST00000612050 C2orf81A6NN90 581 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 RHPN2P1A8MT19 583 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 PPFIA2O75334 1257 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 CSO75390 466 aaKnown RBP12.25□□□□□ -0.45
CBWD3-208ENST00000612050 GAS8O95995 478 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 PIRTP0C851 137 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 PYGMP11217 842 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 MYF5P13349 255 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 PNLIPP16233 465 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 ACTR1BP42025 376 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 ACTR1AP61163 376 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 ADCY2Q08462 1091 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 PTPRRQ15256 657 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 P3H1Q32P28 736 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 HENMT1Q5T8I9 393 aaKnown RBP12.25□□□□□ -0.45
CBWD3-208ENST00000612050 ALS2CLQ60I27 953 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 SLC30A9Q6PML9 568 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 MARK2Q7KZI7 788 aaKnown RBP12.25□□□□□ -0.45
CBWD3-208ENST00000612050 TMC3Q7Z5M5 1100 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 SLC25A41Q8N5S1 370 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 TRAM1L1Q8N609 369 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 AVL9Q8NBF6 648 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 GDAP1Q8TB36 358 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 BLOC1S5Q8TDH9 187 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 GPBAR1Q8TDU6 330 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 TADA1Q96BN2 335 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 PLEKHG4BQ96PX9 1271 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 GFM1Q96RP9 751 aaKnown RBP12.25□□□□□ -0.45
CBWD3-208ENST00000612050 TRIB3Q96RU7 358 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 TMEM121BQ9BXQ6 578 aaPredicted RBP12.25□□□□□ -0.45
CBWD3-208ENST00000612050 FRMD8P1Q9BZ68 369 aaPredicted RBP12.25□□□□□ -0.45
CBWD3-208ENST00000612050 STRADBQ9C0K7 418 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 AKAP7Q9P0M2 348 aaPredicted RBP12.25□□□□□ -0.45
CBWD3-208ENST00000612050 DKK4Q9UBT3 224 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 TRIM10Q9UDY6 481 aa12.25□□□□□ -0.45
CBWD3-208ENST00000612050 PNMA8BQ9ULN7 279 aaPredicted RBP12.25□□□□□ -0.45
CBWD3-208ENST00000612050 ARID1BQ8NFD5 2236 aaPredicted RBP12.24□□□□□ -0.45
CBWD3-208ENST00000612050 LOC285095A0A1B0GVY8 99 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 RRP8O43159 456 aaKnown RBP12.24□□□□□ -0.45
CBWD3-208ENST00000612050 PSMD3O43242 534 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 NUDT21O43809 227 aaKnown RBP12.24□□□□□ -0.45
CBWD3-208ENST00000612050 CELA2BP08218 269 aaPredicted RBP12.24□□□□□ -0.45
CBWD3-208ENST00000612050 VCLP18206 1134 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 HMGCLP35914 325 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 ADCY8P40145 1251 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 CYP4F3Q08477 520 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 ITGA9Q13797 1035 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 RPS6KA1Q15418 735 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 SLC1A5Q15758 541 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 SIRPB2Q5JXA9 342 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 ANKRD20A2Q5SQ80 823 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 ANKRD20A1Q5TYW2 823 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 ANKRD20A3Q5VUR7 823 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 LRRC69Q6ZNQ3 347 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 PROSER1Q86XN7 944 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms