RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 GFRA2O00451 464 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 GPR39O43194 453 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 SUPT3HO75486 399 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 FGF18O76093 207 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 CSPG5O95196 566 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 LRG1P02750 347 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 PYGLP06737 847 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 MTTPP55157 894 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 TSNQ15631 228 aaKnown RBP13.56□□□□□ -0.24
NEK3-205ENST00000610828 LRRC26Q2I0M4 334 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 TAS2R42Q7RTR8 314 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 OTOP2Q7RTS6 562 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 CAMK1DQ8IU85 385 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 TTC30BQ8N4P2 665 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 PAF1Q8N7H5 531 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 PPFIBP2Q8ND30 876 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 STAG3L4Q8TBR4 150 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 PYDC1Q8WXC3 89 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 GPR63Q9BZJ6 419 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 HACD3Q9P035 362 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 CFAP97Q9P2B7 532 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 PPM1HQ9ULR3 514 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 ATP6AP2A0A1C7CYW4 349 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 TRIM43BA6NCK2 446 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 PPP6CO00743 305 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 UBDO15205 165 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 SMAD6O43541 496 aaKnown RBP13.56□□□□□ -0.24
NEK3-205ENST00000610828 FZD6O60353 706 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 KERAO60938 352 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 LILRB3O75022 631 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 NIPSNAP2O75323 286 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 FKBP6O75344 327 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 VPS26AO75436 327 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 ATP6AP2O75787 350 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 PRAMEF12O95522 483 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 TIMP1P01033 207 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 ALPIP09923 528 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 ENO3P13929 434 aaPredicted RBP13.56□□□□□ -0.24
NEK3-205ENST00000610828 PKMP14618 531 aaKnown RBP13.56□□□□□ -0.24
NEK3-205ENST00000610828 GJA1P17302 382 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 SH3BP2P78314 561 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 HERC3Q15034 1050 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 ARMC12Q5T9G4 340 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 RETSATQ6NUM9 610 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 BBS7Q8IWZ6 715 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 KIAA1191Q96A73 305 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 TRIM43Q96BQ3 446 aaPredicted RBP13.56□□□□□ -0.24
NEK3-205ENST00000610828 PAWRQ96IZ0 340 aaKnown RBP13.56□□□□□ -0.24
NEK3-205ENST00000610828 ZNF333Q96JL9 665 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 SLC30A3Q99726 388 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 ZBP1Q9H171 429 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 NDE1Q9NXR1 346 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 ZNF711Q9Y462 761 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 ASB3Q9Y575 518 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 A0A1W2PRU2 124 aa13.55□□□□□ -0.24
NEK3-205ENST00000610828 CFLARO15519 480 aa13.55□□□□□ -0.24
NEK3-205ENST00000610828 GPC4O75487 556 aa13.55□□□□□ -0.24
NEK3-205ENST00000610828 RAG1P15918 1043 aa13.55□□□□□ -0.24
NEK3-205ENST00000610828 ATP6V1C1P21283 382 aa13.55□□□□□ -0.24
NEK3-205ENST00000610828 CLNS1AP54105 237 aaKnown RBP13.55□□□□□ -0.24
NEK3-205ENST00000610828 INHBCP55103 352 aa13.55□□□□□ -0.24
NEK3-205ENST00000610828 ART3Q13508 389 aa13.55□□□□□ -0.24
NEK3-205ENST00000610828 CCNIQ14094 377 aa13.55□□□□□ -0.24
NEK3-205ENST00000610828 FBXO48Q5FWF7 155 aa13.55□□□□□ -0.24
NEK3-205ENST00000610828 GK5Q6ZS86 529 aa13.55□□□□□ -0.24
NEK3-205ENST00000610828 LYSMD3Q7Z3D4 306 aa13.55□□□□□ -0.24
NEK3-205ENST00000610828 KIRREL3Q8IZU9 778 aa13.55□□□□□ -0.24
NEK3-205ENST00000610828 SIDT2Q8NBJ9 832 aaKnown RBP13.55□□□□□ -0.24
NEK3-205ENST00000610828 MYO19Q96H55 970 aa13.55□□□□□ -0.24
NEK3-205ENST00000610828 NSUN5Q96P11 429 aaKnown RBP13.55□□□□□ -0.24
NEK3-205ENST00000610828 EFCAB1Q9HAE3 211 aa13.55□□□□□ -0.24
NEK3-205ENST00000610828 MID1IP1Q9NPA3 183 aa13.55□□□□□ -0.24
NEK3-205ENST00000610828 DNMT3BQ9UBC3 853 aaKnown RBP13.55□□□□□ -0.24
NEK3-205ENST00000610828 EVLQ9UI08 416 aaPredicted RBP13.55□□□□□ -0.24
NEK3-205ENST00000610828 TRMT6Q9UJA5 497 aaKnown RBP13.55□□□□□ -0.24
NEK3-205ENST00000610828 IKZF3Q9UKT9 509 aa13.55□□□□□ -0.24
NEK3-205ENST00000610828 MAFFQ9ULX9 164 aa13.55□□□□□ -0.24
NEK3-205ENST00000610828 CLEC4EQ9ULY5 219 aa13.55□□□□□ -0.24
NEK3-205ENST00000610828 OAS3Q9Y6K5 1087 aaKnown RBP13.55□□□□□ -0.24
NEK3-205ENST00000610828 GBF1Q92538 1859 aa13.55□□□□□ -0.24
NEK3-205ENST00000610828 CARNS1A5YM72 827 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 NCF1BA6NI72 391 aaPredicted RBP13.54□□□□□ -0.24
NEK3-205ENST00000610828 NCF1CA8MVU1 366 aaPredicted RBP13.54□□□□□ -0.24
NEK3-205ENST00000610828 E5RI56 91 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 CDC7O00311 574 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 BTN3A1O00481 513 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 CLASP2O75122 1294 aaKnown RBP13.54□□□□□ -0.24
NEK3-205ENST00000610828 CDK14O94921 469 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 NCF1P14598 390 aaPredicted RBP13.54□□□□□ -0.24
NEK3-205ENST00000610828 CHRM3P20309 590 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 ATP6V0D1P61421 351 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 AP1S1P61966 158 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 CREMQ03060 361 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 AARS2Q5JTZ9 985 aaKnown RBP13.54□□□□□ -0.24
NEK3-205ENST00000610828 CTSL3PQ5NE16 218 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 BNC2Q6ZN30 1099 aaPredicted RBP13.54□□□□□ -0.24
NEK3-205ENST00000610828 CHSY3Q70JA7 882 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 FAM217AQ8IXS0 508 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 CLYBLQ8N0X4 340 aa13.54□□□□□ -0.24
NEK3-205ENST00000610828 FBXO39Q8N4B4 442 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms