RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 RPIAP49247 311 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 CCDC173Q0VFZ6 552 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 C6orf132Q5T0Z8 1188 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 KCTD11Q693B1 232 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 LINC00523Q86TU6 105 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 SLCO6A1Q86UG4 719 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 RBFAQ8N0V3 343 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 GALNT15Q8N3T1 639 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 RASGEF1CQ8N431 466 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 BRSK1Q8TDC3 778 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 APOLD1Q96LR9 279 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 WDR24Q96S15 920 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 BOCQ9BWV1 1114 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 LRRC40Q9H9A6 602 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 FGF22Q9HCT0 170 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 ANGPTL2Q9UKU9 493 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 DOLKQ9UPQ8 538 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 WASF3Q9UPY6 502 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 PKP3Q9Y446 797 aa14.2□□□□□ -0.14
HDDC2-209ENST00000609477 C2orf81A6NN90 581 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 YY2O15391 372 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 FFAR2O15552 330 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 CEP104O60308 925 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 RFPL3O75679 317 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 AGTP01019 485 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 PIRTP0C851 137 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 ACADVLP49748 655 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 GDF10P55107 478 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 DAB2P98082 770 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 E2F1Q01094 437 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 LRP8Q14114 963 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 SIX1Q15475 284 aaPredicted RBP14.19□□□□□ -0.14
HDDC2-209ENST00000609477 TAF1AQ15573 450 aaPredicted RBP14.19□□□□□ -0.14
HDDC2-209ENST00000609477 LONRF2Q1L5Z9 754 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 ZNF569Q5MCW4 686 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 FAM182AQ5T1J6 154 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 RFLNAQ6ZTI6 216 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 RD3Q7Z3Z2 195 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 GLT6D1Q7Z4J2 308 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 CACTIN-AS1Q8N1I8 211 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 TTC30BQ8N4P2 665 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 SLC25A41Q8N5S1 370 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 GPR26Q8NDV2 337 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 OR6C4Q8NGE1 309 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 C1orf54Q8WWF1 131 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 ATG4AQ8WYN0 398 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 OR1E3Q8WZA6 343 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 PDXPQ96GD0 296 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 VPS35Q96QK1 796 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 TBL1YQ9BQ87 522 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 FICDQ9BVA6 458 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 SPATA16Q9BXB7 569 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 CLPBQ9H078 707 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 TCEAL2Q9H3H9 227 aaPredicted RBP14.19□□□□□ -0.14
HDDC2-209ENST00000609477 CYP4F12Q9HCS2 524 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 IL17CQ9P0M4 197 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 PAK5Q9P286 719 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 NEUROG3Q9Y4Z2 214 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 SPO11Q9Y5K1 396 aa14.19□□□□□ -0.14
HDDC2-209ENST00000609477 CRTAMO95727 393 aa14.18□□□□□ -0.14
HDDC2-209ENST00000609477 AP2A1O95782 977 aa14.18□□□□□ -0.14
HDDC2-209ENST00000609477 BPIP17213 487 aa14.18□□□□□ -0.14
HDDC2-209ENST00000609477 LPOP22079 712 aaPredicted RBP14.18□□□□□ -0.14
HDDC2-209ENST00000609477 CHRNA4P43681 627 aa14.18□□□□□ -0.14
HDDC2-209ENST00000609477 ILF3Q12906 894 aaKnown RBP eCLIP14.18□□□□□ -0.14
HDDC2-209ENST00000609477 CCDC89Q8N998 374 aa14.18□□□□□ -0.14
HDDC2-209ENST00000609477 BLOC1S5Q8TDH9 187 aa14.18□□□□□ -0.14
HDDC2-209ENST00000609477 GPBAR1Q8TDU6 330 aa14.18□□□□□ -0.14
HDDC2-209ENST00000609477 AGAP2Q99490 1192 aa14.18□□□□□ -0.14
HDDC2-209ENST00000609477 GSDMCQ9BYG8 508 aa14.18□□□□□ -0.14
HDDC2-209ENST00000609477 CARS2Q9HA77 564 aaKnown RBP14.18□□□□□ -0.14
HDDC2-209ENST00000609477 TRIM39Q9HCM9 518 aa14.18□□□□□ -0.14
HDDC2-209ENST00000609477 CNOT6Q9ULM6 557 aaKnown RBP14.18□□□□□ -0.14
HDDC2-209ENST00000609477 SCN8AQ9UQD0 1980 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 EME2A4GXA9 379 aaPredicted RBP14.17□□□□□ -0.14
HDDC2-209ENST00000609477 FADS2P1A8MWK0 482 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 F5H423 210 aaPredicted RBP14.17□□□□□ -0.14
HDDC2-209ENST00000609477 AURKAO14965 403 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 STX7O15400 261 aaKnown RBP14.17□□□□□ -0.14
HDDC2-209ENST00000609477 SLC25A14O95258 325 aaPredicted RBP14.17□□□□□ -0.14
HDDC2-209ENST00000609477 METTL18O95568 372 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 IFNB1P01574 187 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 CXCR5P32302 372 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 SPAM1P38567 509 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 HADHAP40939 763 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 FOXC1Q12948 553 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 MSLNQ13421 630 aaPredicted RBP14.17□□□□□ -0.14
HDDC2-209ENST00000609477 C1orf61Q13536 156 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 LAMB3Q13751 1172 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 ITGA9Q13797 1035 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 NR0B2Q15466 257 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 SMAD1Q15797 465 aaKnown RBP14.17□□□□□ -0.14
HDDC2-209ENST00000609477 DEFB133Q30KQ1 61 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 DENND5AQ6IQ26 1287 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 OGFOD3Q6PK18 319 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 TMPRSS7Q7RTY8 843 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 TAF8Q7Z7C8 310 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 TMPRSS12Q86WS5 348 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 PHYKPLQ8IUZ5 450 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 SLC35F6Q8N357 371 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms