RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	SCAMP4	Q969E2	229 aa		20.9	■□□□□ 0.94
NECAB3-222	ENST00000607805	AGAP2	Q99490	1192 aa		20.9	■□□□□ 0.94
NECAB3-222	ENST00000607805	SLC39A1	Q9NY26	324 aa		20.9	■□□□□ 0.94
NECAB3-222	ENST00000607805	TUBD1	Q9UJT1	453 aa		20.9	■□□□□ 0.94
NECAB3-222	ENST00000607805	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	20.9	■□□□□ 0.94
NECAB3-222	ENST00000607805	SCIN	Q9Y6U3	715 aa		20.9	■□□□□ 0.94
NECAB3-222	ENST00000607805	ICE1	Q9Y2F5	2266 aa		20.89	■□□□□ 0.94
NECAB3-222	ENST00000607805	GOLGA6C	A6NDK9	693 aa		20.89	■□□□□ 0.93
NECAB3-222	ENST00000607805	GOLGA6B	A6NDN3	693 aa		20.89	■□□□□ 0.93
NECAB3-222	ENST00000607805	GOLGA6D	P0CG33	693 aa		20.89	■□□□□ 0.93
NECAB3-222	ENST00000607805	ARL4A	P40617	200 aa		20.89	■□□□□ 0.93
NECAB3-222	ENST00000607805	POLE2	P56282	527 aa		20.89	■□□□□ 0.93
NECAB3-222	ENST00000607805	STX1A	Q16623	288 aa		20.89	■□□□□ 0.93
NECAB3-222	ENST00000607805	MARC1	Q5VT66	337 aa		20.89	■□□□□ 0.93
NECAB3-222	ENST00000607805	TXNRD3NB	Q6F5E7	133 aa		20.89	■□□□□ 0.93
NECAB3-222	ENST00000607805	ALG1L	Q6GMV1	187 aa		20.89	■□□□□ 0.93
NECAB3-222	ENST00000607805	TRIM74	Q86UV6	250 aa		20.89	■□□□□ 0.93
NECAB3-222	ENST00000607805	BBS5	Q8N3I7	341 aa		20.89	■□□□□ 0.93
NECAB3-222	ENST00000607805	ZNF653	Q96CK0	615 aa		20.89	■□□□□ 0.93
NECAB3-222	ENST00000607805	AP2M1	Q96CW1	435 aa		20.89	■□□□□ 0.93
NECAB3-222	ENST00000607805	SLC45A3	Q96JT2	553 aa		20.89	■□□□□ 0.93
NECAB3-222	ENST00000607805	ISCU	Q9H1K1	167 aa		20.89	■□□□□ 0.93
NECAB3-222	ENST00000607805	RTN4	Q9NQC3	1192 aa	Known RBP	20.89	■□□□□ 0.93
NECAB3-222	ENST00000607805	GOLGA6A	Q9NYA3	693 aa		20.89	■□□□□ 0.93
NECAB3-222	ENST00000607805		A0A0J9YYE9	177 aa		20.88	■□□□□ 0.93
NECAB3-222	ENST00000607805	RAD1	O60671	282 aa		20.88	■□□□□ 0.93
NECAB3-222	ENST00000607805	TRBC1	P01850	177 aa		20.88	■□□□□ 0.93
NECAB3-222	ENST00000607805	RARA	P10276	462 aa		20.88	■□□□□ 0.93
NECAB3-222	ENST00000607805	IL4R	P24394	825 aa		20.88	■□□□□ 0.93
NECAB3-222	ENST00000607805	RAB15	P59190	212 aa		20.88	■□□□□ 0.93
NECAB3-222	ENST00000607805	KCNAB2	Q13303	367 aa		20.88	■□□□□ 0.93
NECAB3-222	ENST00000607805	BIRC2	Q13490	618 aa		20.88	■□□□□ 0.93
NECAB3-222	ENST00000607805	LRP8	Q14114	963 aa		20.88	■□□□□ 0.93
NECAB3-222	ENST00000607805	DCAF12	Q5T6F0	453 aa		20.88	■□□□□ 0.93
NECAB3-222	ENST00000607805	ANKS6	Q68DC2	871 aa		20.88	■□□□□ 0.93
NECAB3-222	ENST00000607805	ZNF761	Q86XN6	746 aa	Predicted RBP	20.88	■□□□□ 0.93
NECAB3-222	ENST00000607805	ATPAF2	Q8N5M1	289 aa		20.88	■□□□□ 0.93
NECAB3-222	ENST00000607805	RTP4	Q96DX8	246 aa		20.88	■□□□□ 0.93
NECAB3-222	ENST00000607805	PCDH18	Q9HCL0	1135 aa		20.88	■□□□□ 0.93
NECAB3-222	ENST00000607805	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	20.88	■□□□□ 0.93
NECAB3-222	ENST00000607805	EFCAB7	A8K855	629 aa		20.87	■□□□□ 0.93
NECAB3-222	ENST00000607805	CAPN5	O15484	640 aa	Predicted RBP	20.87	■□□□□ 0.93
NECAB3-222	ENST00000607805	DNAJC6	O75061	913 aa		20.87	■□□□□ 0.93
NECAB3-222	ENST00000607805	PYGL	P06737	847 aa		20.87	■□□□□ 0.93
NECAB3-222	ENST00000607805	ZNF30	P17039	623 aa		20.87	■□□□□ 0.93
NECAB3-222	ENST00000607805	STC1	P52823	247 aa		20.87	■□□□□ 0.93
NECAB3-222	ENST00000607805	MC2R	Q01718	297 aa		20.87	■□□□□ 0.93
NECAB3-222	ENST00000607805	ASIC2	Q16515	512 aa		20.87	■□□□□ 0.93
NECAB3-222	ENST00000607805	WDR74	Q6RFH5	385 aa	Predicted RBP	20.87	■□□□□ 0.93
NECAB3-222	ENST00000607805	SASS6	Q6UVJ0	657 aa		20.87	■□□□□ 0.93
NECAB3-222	ENST00000607805	RAVER1	Q8IY67	606 aa	Known RBP	20.87	■□□□□ 0.93
NECAB3-222	ENST00000607805	FAM71B	Q8TC56	605 aa		20.87	■□□□□ 0.93
NECAB3-222	ENST00000607805	TEKT4	Q8WW24	435 aa		20.87	■□□□□ 0.93
NECAB3-222	ENST00000607805	HSPH1	Q92598	858 aa		20.87	■□□□□ 0.93
NECAB3-222	ENST00000607805	TEFM	Q96QE5	360 aa	Known RBP	20.87	■□□□□ 0.93
NECAB3-222	ENST00000607805	WDR24	Q96S15	920 aa		20.87	■□□□□ 0.93
NECAB3-222	ENST00000607805	MRPL47	Q9HD33	250 aa	Known RBP	20.87	■□□□□ 0.93
NECAB3-222	ENST00000607805	NT5M	Q9NPB1	228 aa		20.87	■□□□□ 0.93
NECAB3-222	ENST00000607805	CNOT6	Q9ULM6	557 aa	Known RBP	20.87	■□□□□ 0.93
NECAB3-222	ENST00000607805	MED13	Q9UHV7	2174 aa		20.86	■□□□□ 0.93
NECAB3-222	ENST00000607805		A6NCN8	305 aa		20.86	■□□□□ 0.93
NECAB3-222	ENST00000607805	ZNF891	A8MT65	544 aa	Predicted RBP	20.86	■□□□□ 0.93
NECAB3-222	ENST00000607805	PRL	P01236	227 aa		20.86	■□□□□ 0.93
NECAB3-222	ENST00000607805	MYBL1	P10243	752 aa		20.86	■□□□□ 0.93
NECAB3-222	ENST00000607805	SERPINB6	P35237	376 aa		20.86	■□□□□ 0.93
NECAB3-222	ENST00000607805	SLC25A11	Q02978	314 aa	Known RBP	20.86	■□□□□ 0.93
NECAB3-222	ENST00000607805	TIPARP	Q7Z3E1	657 aa	Known RBP	20.86	■□□□□ 0.93
NECAB3-222	ENST00000607805	FAM129C	Q86XR2	697 aa		20.86	■□□□□ 0.93
NECAB3-222	ENST00000607805	PTRH1	Q86Y79	214 aa	Known RBP	20.86	■□□□□ 0.93
NECAB3-222	ENST00000607805	GALNT13	Q8IUC8	556 aa		20.86	■□□□□ 0.93
NECAB3-222	ENST00000607805	LRRC49	Q8IUZ0	686 aa		20.86	■□□□□ 0.93
NECAB3-222	ENST00000607805	NRSN1	Q8IZ57	195 aa		20.86	■□□□□ 0.93
NECAB3-222	ENST00000607805	EXD1	Q8NHP7	514 aa		20.86	■□□□□ 0.93
NECAB3-222	ENST00000607805	MAML1	Q92585	1016 aa		20.86	■□□□□ 0.93
NECAB3-222	ENST00000607805	CATSPER2	Q96P56	530 aa		20.86	■□□□□ 0.93
NECAB3-222	ENST00000607805	EPN3	Q9H201	632 aa		20.86	■□□□□ 0.93
NECAB3-222	ENST00000607805	SARS2	Q9NP81	518 aa	Known RBP	20.86	■□□□□ 0.93
NECAB3-222	ENST00000607805	FBXO8	Q9NRD0	319 aa		20.86	■□□□□ 0.93
NECAB3-222	ENST00000607805	VPS18	Q9P253	973 aa		20.86	■□□□□ 0.93
NECAB3-222	ENST00000607805	OAS3	Q9Y6K5	1087 aa	Known RBP	20.86	■□□□□ 0.93
NECAB3-222	ENST00000607805	TRBV23OR9-2	A0A075B6M9	112 aa		20.85	■□□□□ 0.93
NECAB3-222	ENST00000607805	NKX2-8	O15522	239 aa		20.85	■□□□□ 0.93
NECAB3-222	ENST00000607805	DUX1	O43812	170 aa		20.85	■□□□□ 0.93
NECAB3-222	ENST00000607805	MAP3K6	O95382	1288 aa		20.85	■□□□□ 0.93
NECAB3-222	ENST00000607805	MARK2	Q7KZI7	788 aa	Known RBP	20.85	■□□□□ 0.93
NECAB3-222	ENST00000607805	NIPA2	Q8N8Q9	360 aa		20.85	■□□□□ 0.93
NECAB3-222	ENST00000607805	OR10G6	Q8NH81	332 aa		20.85	■□□□□ 0.93
NECAB3-222	ENST00000607805	NSMCE1	Q8WV22	266 aa		20.85	■□□□□ 0.93
NECAB3-222	ENST00000607805	TRIM11	Q96F44	468 aa		20.85	■□□□□ 0.93
NECAB3-222	ENST00000607805	LYSMD1	Q96S90	227 aa		20.85	■□□□□ 0.93
NECAB3-222	ENST00000607805	SLC38A3	Q99624	504 aa		20.85	■□□□□ 0.93
NECAB3-222	ENST00000607805	RIOK2	Q9BVS4	552 aa	Known RBP	20.85	■□□□□ 0.93
NECAB3-222	ENST00000607805	MYO1A	Q9UBC5	1043 aa		20.85	■□□□□ 0.93
NECAB3-222	ENST00000607805	TMEM184B	Q9Y519	407 aa	Predicted RBP	20.85	■□□□□ 0.93
NECAB3-222	ENST00000607805	LOC101059948	A0A1B0GTJ6	334 aa		20.84	■□□□□ 0.93
NECAB3-222	ENST00000607805	CLEC18A	A5D8T8	446 aa		20.84	■□□□□ 0.93
NECAB3-222	ENST00000607805	MAP4	P27816	1152 aa	Known RBP	20.84	■□□□□ 0.93
NECAB3-222	ENST00000607805	CCR10	P46092	362 aa		20.84	■□□□□ 0.93
NECAB3-222	ENST00000607805	PIGH	Q14442	188 aa	Predicted RBP	20.84	■□□□□ 0.93
NECAB3-222	ENST00000607805	SKIDA1	Q1XH10	827 aa		20.84	■□□□□ 0.93

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms