RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 C6orf52Q5T4I8 152 aa11.75□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 SLC43A3Q8NBI5 491 aa11.75□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 SIDT2Q8NBJ9 832 aaKnown RBP11.75□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 TUBGCP3Q96CW5 907 aa11.75□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 ASB9Q96DX5 294 aa11.75□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 MUC3BQ9H195 1237 aa11.75□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 SARS2Q9NP81 518 aaKnown RBP11.75□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 UTP6Q9NYH9 597 aaKnown RBP11.75□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 AGO1Q9UL18 857 aaKnown RBP11.75□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 ASB1Q9Y576 335 aa11.75□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 RAI2Q9Y5P3 530 aa11.75□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 A0A0J9YYE9 177 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 PRSS51A0A1B0GVH4 220 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 NPEPPSL1A6NEC2 478 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 PEX1O43933 1283 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 ECI2O75521 394 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 PGM3O95394 542 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 PRAMEF12O95522 483 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 CRTAMO95727 393 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 ALDH1A1P00352 501 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 CR2P20023 1033 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 GPX3P22352 226 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 SUOXP51687 545 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 DIO3P55073 304 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 CDH4P55283 916 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 CDKL1Q00532 357 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 NFKB2Q00653 900 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 ZNF177Q13360 481 aaPredicted RBP11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 TYSND1Q2T9J0 566 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 HECTD3Q5T447 861 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 RNF219Q5W0B1 726 aaPredicted RBP11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 ALG1LQ6GMV1 187 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 UGT3A1Q6NUS8 523 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 BBS5Q8N3I7 341 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 CCDC97Q96F63 343 aaPredicted RBP11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 CNBD2Q96M20 576 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 BIRC8Q96P09 236 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 SLC25A23Q9BV35 468 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 VN1R3Q9BXE9 311 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 TDRD1Q9BXT4 1180 aaKnown RBP11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 CCDC68Q9H2F9 335 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 SPAG4Q9NPE6 437 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 TAS2R13Q9NYV9 303 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 BTN3A1O00481 513 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 TRIM24O15164 1050 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 KDELR3O43731 214 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 HGFP14210 728 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 KPNA1P52294 538 aaPredicted RBP11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 CLCQ05315 142 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 CAPRIN1Q14444 709 aaKnown RBP11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 ZFP1Q6P2D0 407 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 UGT2A3Q6UWM9 527 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 RAB44Q7Z6P3 723 aaPredicted RBP11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 SPDYE1Q8NFV5 336 aaPredicted RBP11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 LRTOMTQ8WZ04 291 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 ZNF599Q96NL3 588 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 CROTQ9UKG9 612 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 ANKRD36A6QL64 1941 aa11.74□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 C15orf38-AP3S2A0A0A6YYH1 394 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 H7C4K7 107 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 CD160O95971 181 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 HMGA1P17096 107 aaKnown RBP11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 OGNP20774 298 aaKnown RBP11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 MZF1P28698 734 aaPredicted RBP11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 MC4RP32245 332 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 ARF5P84085 180 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 XIAPP98170 497 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 C5orf22Q49AR2 442 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 ZRANB3Q5FWF4 1079 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 ARPINQ7Z6K5 226 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 TMCO2Q7Z6W1 182 aaPredicted RBP11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 DEFB128Q7Z7B8 93 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 AMIGO2Q86SJ2 522 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 NPAS4Q8IUM7 802 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 FBXO39Q8N4B4 442 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 TMEM102Q8N9M5 508 aaPredicted RBP11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 OR6K2Q8NGY2 324 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 STAG3L4Q8TBR4 150 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 EEF1AKMT1Q8WVE0 214 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 KIAA1191Q96A73 305 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 FUBP1Q96AE4 644 aaKnown RBP11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 ACOX2Q99424 681 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 TTLL2Q9BWV7 592 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 TFB2MQ9H5Q4 396 aaKnown RBP11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 ELAC1Q9H777 363 aaKnown RBP11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 MAP10Q9P2G4 905 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 AP4B1Q9Y6B7 739 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 C2orf81A6NN90 581 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 ANKRD66B4E2M5 251 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 PQBP1O60828 265 aaKnown RBP11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 C1RP00736 705 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 CAPN3P20807 821 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 ALDH7A1P49419 539 aaKnown RBP11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 APLP1P51693 650 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 CHN2P52757 468 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 STX1BP61266 288 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 TWF1Q12792 350 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 TRAF2Q12933 501 aa11.73□□□□□ -0.53
HMGN3-AS1-201ENST00000604516 PLD1Q13393 1074 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms