RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 PNPT1Q8TCS8 783 aaKnown RBP8.68□□□□□ -1.02
CSMD1-216ENST00000602557 FAXDC2Q96IV6 333 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 STOX2Q9P2F5 926 aaPredicted RBP8.68□□□□□ -1.02
CSMD1-216ENST00000602557 EFCAB9A8MZ26 197 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 TRDMT1O14717 391 aaKnown RBP8.68□□□□□ -1.02
CSMD1-216ENST00000602557 PGRMC2O15173 223 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 CHRM5P08912 532 aaPredicted RBP8.68□□□□□ -1.02
CSMD1-216ENST00000602557 BNIP2Q12982 314 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 DEPDC4Q8N2C3 294 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 ZBTB45Q96K62 511 aaPredicted RBP8.68□□□□□ -1.02
CSMD1-216ENST00000602557 TTYH2Q9BSA4 534 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 A0A0A0MRY4 1105 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 OR2AT4A6NND4 320 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 UGT2B4P06133 528 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 FGRP09769 529 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 ZNF14P17017 642 aaPredicted RBP8.68□□□□□ -1.02
CSMD1-216ENST00000602557 STT3AP46977 705 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 PFKPQ01813 784 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 MTA1Q13330 715 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 CAMK1Q14012 370 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 DEFB106AQ8N104 65 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 SLC9A6Q92581 669 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 SPATA13Q96N96 652 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 RHBGQ9H310 441 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 ACP6Q9NPH0 428 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 CPA4Q9UI42 421 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 DDTLA6NHG4 134 aaPredicted RBP8.68□□□□□ -1.02
CSMD1-216ENST00000602557 B3GALNT1O75752 331 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 KDELR1P24390 212 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 RAPSNQ13702 412 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 ZDHHC17Q8IUH5 632 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 REPS2Q8NFH8 660 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 OR52L1Q8NGH7 329 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 COQ8AQ8NI60 647 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 ZFAND2BQ8WV99 257 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 CLIP3Q96DZ5 547 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 FCRL4Q96PJ5 515 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 PFDN5Q99471 154 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 RACGAP1Q9H0H5 632 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 HIPK3Q9H422 1215 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 COQ10BQ9H8M1 238 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 POPDC2Q9HBU9 364 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 PCDH18Q9HCL0 1135 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 TBCCD1Q9NVR7 557 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 SORCS3Q9UPU3 1222 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 Q96MT0 163 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 DUSP9Q99956 384 aaKnown RBP8.68□□□□□ -1.02
CSMD1-216ENST00000602557 SNTG1Q9NSN8 517 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 RPS6KA6Q9UK32 745 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 PTPRUQ92729 1446 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 PGLSO95336 258 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 HOXD12P35452 270 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 CYP2A13Q16696 494 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 CCNYL2Q5T2Q4 361 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 ZNF431Q8TF32 576 aaPredicted RBP8.68□□□□□ -1.02
CSMD1-216ENST00000602557 S100A13Q99584 98 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 SLC22A4Q9H015 551 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 TNKS2Q9H2K2 1166 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 OAS3Q9Y6K5 1087 aaKnown RBP8.68□□□□□ -1.02
CSMD1-216ENST00000602557 CEP290O15078 2479 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 LRATO95237 230 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 CYP2A6P11509 494 aaPredicted RBP8.68□□□□□ -1.02
CSMD1-216ENST00000602557 MYBPC3Q14896 1274 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 MEA1Q16626 185 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 ARMC12Q5T9G4 340 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 RAB12Q6IQ22 244 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 PCYOX1Q9UHG3 505 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 FXYD6-FXYD2A0A087WZ82 144 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 PRH1P02810 166 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 LTA4HP09960 611 aaKnown RBP8.68□□□□□ -1.02
CSMD1-216ENST00000602557 DLG1Q12959 904 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 TPGS1Q6ZTW0 290 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 DSG4Q86SJ6 1040 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 FXYD6Q9H0Q3 95 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 OR12D3Q9UGF7 316 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 RECQL4O94761 1208 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 SHMT1P34896 483 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 NAGLUP54802 743 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 AKT1S1Q96B36 256 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 C11orf16Q9NQ32 467 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 NFASCO94856 1347 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 EML1O00423 815 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 FOXD2O60548 495 aaPredicted RBP8.67□□□□□ -1.02
CSMD1-216ENST00000602557 S100A12P80511 92 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 TOMM20Q15388 145 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 TGFBIQ15582 683 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 FAM183BPQ6ZVS7 135 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 SLC37A3Q8NCC5 494 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 ELOVL4Q9GZR5 314 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 TMEM168Q9H0V1 697 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 ACTL7BQ9Y614 415 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 JCADQ9P266 1359 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 RARRES1P49788 294 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 CDH13P55290 713 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 MFSD10Q14728 455 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 DUPD1Q68J44 220 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 TRABD2AQ86V40 505 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 OR52K2Q8NGK3 314 aa8.67□□□□□ -1.02
CSMD1-216ENST00000602557 AHCYL2Q96HN2 611 aaKnown RBP8.67□□□□□ -1.02
CSMD1-216ENST00000602557 SLC39A1Q9NY26 324 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms