RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	LZTR1	Q8N653	840 aa		18.16	■□□□□ 0.5
IRF3-231	ENST00000602190	ESX1	Q8N693	406 aa		18.16	■□□□□ 0.5
IRF3-231	ENST00000602190	EPB41L1	Q9H4G0	881 aa		18.16	■□□□□ 0.5
IRF3-231	ENST00000602190	DHX35	Q9H5Z1	703 aa	Known RBP	18.16	■□□□□ 0.5
IRF3-231	ENST00000602190	NOD2	Q9HC29	1040 aa		18.16	■□□□□ 0.5
IRF3-231	ENST00000602190	FAM207A	Q9NSI2	230 aa	Predicted RBP	18.16	■□□□□ 0.5
IRF3-231	ENST00000602190	TAB2	Q9NYJ8	693 aa		18.16	■□□□□ 0.5
IRF3-231	ENST00000602190	VPS18	Q9P253	973 aa		18.16	■□□□□ 0.5
IRF3-231	ENST00000602190	DOPEY1	Q5JWR5	2465 aa		18.15	■□□□□ 0.5
IRF3-231	ENST00000602190	MAP3K6	O95382	1288 aa		18.15	■□□□□ 0.5
IRF3-231	ENST00000602190	NR1D1	P20393	614 aa		18.15	■□□□□ 0.5
IRF3-231	ENST00000602190	NFKBIA	P25963	317 aa		18.15	■□□□□ 0.5
IRF3-231	ENST00000602190	HHEX	Q03014	270 aa		18.15	■□□□□ 0.5
IRF3-231	ENST00000602190	BIRC2	Q13490	618 aa		18.15	■□□□□ 0.5
IRF3-231	ENST00000602190	CAPRIN2	Q6IMN6	1127 aa	Known RBP	18.15	■□□□□ 0.5
IRF3-231	ENST00000602190	PLEKHA7	Q6IQ23	1121 aa		18.15	■□□□□ 0.5
IRF3-231	ENST00000602190	IYD	Q6PHW0	289 aa		18.15	■□□□□ 0.5
IRF3-231	ENST00000602190	ATCAY	Q86WG3	371 aa		18.15	■□□□□ 0.5
IRF3-231	ENST00000602190	CCDC13	Q8IYE1	715 aa		18.15	■□□□□ 0.5
IRF3-231	ENST00000602190	FNIP1	Q8TF40	1166 aa		18.15	■□□□□ 0.5
IRF3-231	ENST00000602190	SLC38A3	Q99624	504 aa		18.15	■□□□□ 0.5
IRF3-231	ENST00000602190	CWC15	Q9P013	229 aa	Known RBP	18.15	■□□□□ 0.5
IRF3-231	ENST00000602190	TMEM98	Q9Y2Y6	226 aa		18.15	■□□□□ 0.5
IRF3-231	ENST00000602190	PCDHGA6	Q9Y5G7	932 aa		18.15	■□□□□ 0.5
IRF3-231	ENST00000602190	MRPS18B	Q9Y676	258 aa	Known RBP	18.15	■□□□□ 0.5
IRF3-231	ENST00000602190	RPS6KL1	Q9Y6S9	549 aa		18.15	■□□□□ 0.5
IRF3-231	ENST00000602190	CREBBP	Q92793	2442 aa		18.15	■□□□□ 0.5
IRF3-231	ENST00000602190	ANKRD62	A6NC57	917 aa		18.14	■□□□□ 0.49
IRF3-231	ENST00000602190	LILRA5	A6NI73	299 aa		18.14	■□□□□ 0.49
IRF3-231	ENST00000602190	DFFA	O00273	331 aa		18.14	■□□□□ 0.49
IRF3-231	ENST00000602190	PES1	O00541	588 aa	Known RBP	18.14	■□□□□ 0.49
IRF3-231	ENST00000602190	MAFK	O60675	156 aa		18.14	■□□□□ 0.49
IRF3-231	ENST00000602190	PYGL	P06737	847 aa		18.14	■□□□□ 0.49
IRF3-231	ENST00000602190	FURIN	P09958	794 aa		18.14	■□□□□ 0.49
IRF3-231	ENST00000602190	GPR1	P46091	355 aa		18.14	■□□□□ 0.49
IRF3-231	ENST00000602190	PTS	Q03393	145 aa		18.14	■□□□□ 0.49
IRF3-231	ENST00000602190	MAMLD1	Q13495	774 aa		18.14	■□□□□ 0.49
IRF3-231	ENST00000602190	KRT31	Q15323	416 aa		18.14	■□□□□ 0.49
IRF3-231	ENST00000602190	ALG1L	Q6GMV1	187 aa		18.14	■□□□□ 0.49
IRF3-231	ENST00000602190	ACAD10	Q6JQN1	1059 aa		18.14	■□□□□ 0.49
IRF3-231	ENST00000602190	APLF	Q8IW19	511 aa	Predicted RBP	18.14	■□□□□ 0.49
IRF3-231	ENST00000602190	AHCYL2	Q96HN2	611 aa	Known RBP	18.14	■□□□□ 0.49
IRF3-231	ENST00000602190	AGAP2	Q99490	1192 aa		18.14	■□□□□ 0.49
IRF3-231	ENST00000602190	CLSTN2	Q9H4D0	955 aa		18.14	■□□□□ 0.49
IRF3-231	ENST00000602190	UCK1	Q9HA47	277 aa		18.14	■□□□□ 0.49
IRF3-231	ENST00000602190	LRRC4C	Q9HCJ2	640 aa		18.14	■□□□□ 0.49
IRF3-231	ENST00000602190	PLEKHB1	Q9UF11	243 aa	Predicted RBP	18.14	■□□□□ 0.49
IRF3-231	ENST00000602190	TBC1D29	Q9UFV1	150 aa		18.14	■□□□□ 0.49
IRF3-231	ENST00000602190	CNOT6	Q9ULM6	557 aa	Known RBP	18.14	■□□□□ 0.49
IRF3-231	ENST00000602190	ESPL1	Q14674	2120 aa		18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	POLR1C	O15160	346 aa	Predicted RBP	18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	ZNF30	P17039	623 aa		18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	CLCNKA	P51800	687 aa		18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	STC1	P52823	247 aa		18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	PMS2	P54278	862 aa		18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	MLLT10	P55197	1068 aa		18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	IHH	Q14623	411 aa		18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	LRRC66	Q68CR7	880 aa		18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	HIST2H2BC	Q6DN03	193 aa		18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	DOK6	Q6PKX4	331 aa		18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	USP45	Q70EL2	814 aa		18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	TRIM74	Q86UV6	250 aa		18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	GALNT13	Q8IUC8	556 aa		18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	GALNT11	Q8NCW6	608 aa		18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	SCAMP4	Q969E2	229 aa		18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	SH3KBP1	Q96B97	665 aa		18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	AP2M1	Q96CW1	435 aa		18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	WDR24	Q96S15	920 aa		18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	AGPAT1	Q99943	283 aa		18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	HERPUD2	Q9BSE4	406 aa		18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	OGFR	Q9NZT2	677 aa		18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	CENPE	Q02224	2701 aa		18.13	■□□□□ 0.49
IRF3-231	ENST00000602190	TNRC6A	Q8NDV7	1962 aa	Known RBP	18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	KIR2DS5	A0A0G2JLQ3	304 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190		A0A0G2JNG1	304 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190		A0A0U1RQS6	177 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190		A8MU76	341 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	MKRN2OS	H3BPM6	223 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	KIR2DS3	K7RE56	304 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	TOX3	O15405	576 aa	Predicted RBP	18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	PDGFA	P04085	211 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	PDHA1	P08559	390 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	KRT7	P08729	469 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	ATP1A3	P13637	1013 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	ZNF28	P17035	718 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	UQCRFS1	P47985	274 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	UBE2I	P63279	158 aa	Known RBP	18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	ZNF235	Q14590	738 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	KIR2DS5	Q14953	304 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	DENND2C	Q68D51	928 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	DCUN1D2	Q6PH85	259 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	TEX26	Q8N6G2	289 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	ENOX1	Q8TC92	643 aa	Known RBP	18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	MLXIPL	Q9NP71	852 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	PRDM8	Q9NQV8	689 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	DACH1	Q9UI36	760 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	POLH	Q9Y253	713 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	ADGRG1	Q9Y653	693 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	CACNA1D	Q01668	2161 aa		18.12	■□□□□ 0.49
IRF3-231	ENST00000602190	MED13	Q9UHV7	2174 aa		18.11	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms