RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 PROSER1Q86XN7 944 aa17.1■□□□□ 0.33
HERC3-214ENST00000601319 MARCH9Q86YJ5 346 aa17.1■□□□□ 0.33
HERC3-214ENST00000601319 GPR156Q8NFN8 814 aa17.1■□□□□ 0.33
HERC3-214ENST00000601319 OR6C4Q8NGE1 309 aa17.1■□□□□ 0.33
HERC3-214ENST00000601319 WDR48Q8TAF3 677 aa17.1■□□□□ 0.33
HERC3-214ENST00000601319 MAPK15Q8TD08 544 aa17.1■□□□□ 0.33
HERC3-214ENST00000601319 GPBAR1Q8TDU6 330 aa17.1■□□□□ 0.33
HERC3-214ENST00000601319 EID2BQ96D98 161 aa17.1■□□□□ 0.33
HERC3-214ENST00000601319 HES6Q96HZ4 224 aa17.1■□□□□ 0.33
HERC3-214ENST00000601319 NRSN2Q9GZP1 204 aa17.1■□□□□ 0.33
HERC3-214ENST00000601319 GBA3Q9H227 469 aa17.1■□□□□ 0.33
HERC3-214ENST00000601319 FAM83DQ9H4H8 585 aa17.1■□□□□ 0.33
HERC3-214ENST00000601319 CARS2Q9HA77 564 aaKnown RBP17.1■□□□□ 0.33
HERC3-214ENST00000601319 VPS18Q9P253 973 aa17.1■□□□□ 0.33
HERC3-214ENST00000601319 PADI4Q9UM07 663 aa17.1■□□□□ 0.33
HERC3-214ENST00000601319 SUFUQ9UMX1 484 aa17.1■□□□□ 0.33
HERC3-214ENST00000601319 NBEAQ8NFP9 2946 aa17.09■□□□□ 0.33
HERC3-214ENST00000601319 CPED1A4D0V7 1026 aa17.09■□□□□ 0.33
HERC3-214ENST00000601319 H7C0C1 242 aa17.09■□□□□ 0.33
HERC3-214ENST00000601319 MT-CO3P00414 261 aa17.09■□□□□ 0.33
HERC3-214ENST00000601319 FUCA1P04066 466 aa17.09■□□□□ 0.33
HERC3-214ENST00000601319 RBL1P28749 1068 aa17.09■□□□□ 0.33
HERC3-214ENST00000601319 ATP5OP48047 213 aa17.09■□□□□ 0.33
HERC3-214ENST00000601319 WNT3AP56704 352 aa17.09■□□□□ 0.33
HERC3-214ENST00000601319 ILF3Q12906 894 aaKnown RBP eCLIP17.09■□□□□ 0.33
HERC3-214ENST00000601319 MPP3Q13368 585 aa17.09■□□□□ 0.33
HERC3-214ENST00000601319 RTP5Q14D33 572 aa17.09■□□□□ 0.33
HERC3-214ENST00000601319 PDPK2PQ6A1A2 396 aa17.09■□□□□ 0.33
HERC3-214ENST00000601319 ITPRIPL1Q6GPH6 555 aa17.09■□□□□ 0.33
HERC3-214ENST00000601319 OGFOD3Q6PK18 319 aa17.09■□□□□ 0.33
HERC3-214ENST00000601319 PID1Q7Z2X4 250 aa17.09■□□□□ 0.33
HERC3-214ENST00000601319 TMC3Q7Z5M5 1100 aa17.09■□□□□ 0.33
HERC3-214ENST00000601319 TAF8Q7Z7C8 310 aa17.09■□□□□ 0.33
HERC3-214ENST00000601319 OXNAD1Q96HP4 312 aaPredicted RBP17.09■□□□□ 0.33
HERC3-214ENST00000601319 DEPDC7Q96QD5 511 aa17.09■□□□□ 0.33
HERC3-214ENST00000601319 AGAP2Q99490 1192 aa17.09■□□□□ 0.33
HERC3-214ENST00000601319 GSDMCQ9BYG8 508 aa17.09■□□□□ 0.33
HERC3-214ENST00000601319 TRABDQ9H4I3 376 aa17.09■□□□□ 0.33
HERC3-214ENST00000601319 RSPH14Q9UHP6 348 aa17.09■□□□□ 0.33
HERC3-214ENST00000601319 MOSPD1Q9UJG1 213 aa17.09■□□□□ 0.33
HERC3-214ENST00000601319 DDX3YO15523 660 aaKnown RBP17.08■□□□□ 0.32
HERC3-214ENST00000601319 KRT86O43790 486 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 TCEA3O75764 348 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 STK10O94804 968 aaKnown RBP17.08■□□□□ 0.32
HERC3-214ENST00000601319 FTCDO95954 541 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 RBP3P10745 1247 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 HLA-DPA1P20036 260 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 TNNT3P45378 269 aaPredicted RBP17.08■□□□□ 0.32
HERC3-214ENST00000601319 GNPDA1P46926 289 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 EIF3EP60228 445 aaKnown RBP17.08■□□□□ 0.32
HERC3-214ENST00000601319 KLF1Q13351 362 aaPredicted RBP17.08■□□□□ 0.32
HERC3-214ENST00000601319 PEX6Q13608 980 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 LRP8Q14114 963 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 TCEA2Q15560 299 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 PERM1Q5SV97 790 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 AADACL2Q6P093 401 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 ZNF662Q6ZS27 426 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 KDELC2Q7Z4H8 507 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 TTC13Q8NBP0 860 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 PTCD2Q8WV60 388 aaKnown RBP17.08■□□□□ 0.32
HERC3-214ENST00000601319 GRAMD1AQ96CP6 724 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 MRGPRX2Q96LB1 330 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 PPP1R2P1Q96PQ5 205 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 ZSCAN5AQ9BUG6 496 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 ABCG4Q9H172 646 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 UBP1Q9NZI7 540 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 HACD3Q9P035 362 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 SIRPGQ9P1W8 387 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 CNOT6Q9ULM6 557 aaKnown RBP17.08■□□□□ 0.32
HERC3-214ENST00000601319 PACSIN2Q9UNF0 486 aaPredicted RBP17.08■□□□□ 0.32
HERC3-214ENST00000601319 CFAP47Q6ZTR5 3102 aa17.08■□□□□ 0.32
HERC3-214ENST00000601319 GOLGA6L9A6NEM1 432 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 FADS2P1A8MWK0 482 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 NOBOXO60393 691 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 ANXA9O76027 345 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 FGF1P05230 155 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 PIRTP0C851 137 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 HMGCLP35914 325 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 POLD2P49005 469 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 C14orf28Q4W4Y0 310 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 SIRPB2Q5JXA9 342 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 CERCAMQ5T4B2 595 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 DOK6Q6PKX4 331 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 C17orf82Q86X59 251 aaPredicted RBP17.07■□□□□ 0.32
HERC3-214ENST00000601319 NRROSQ86YC3 692 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 FAM46DQ8NEK8 389 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 CCL4L1Q8NHW4 92 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 MDM1Q8TC05 714 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 PLEKHG4BQ96PX9 1271 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 OR2M4Q96R27 311 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 CCDC3Q9BQI4 270 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 GORASP1Q9BQQ3 440 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 GPR63Q9BZJ6 419 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 RMI1Q9H9A7 625 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 GULP1Q9UBP9 304 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 SHOC2Q9UQ13 582 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 SPO11Q9Y5K1 396 aa17.07■□□□□ 0.32
HERC3-214ENST00000601319 SRRM3A6NNA2 597 aaPredicted RBP17.06■□□□□ 0.32
HERC3-214ENST00000601319 INPP4BO15327 924 aa17.06■□□□□ 0.32
HERC3-214ENST00000601319 KCNN4O15554 427 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms