RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 CRYBG2Q8N1P7 616 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 GTF3C2Q8WUA4 911 aaPredicted RBP18.29■□□□□ 0.52
UPF1-210ENST00000600689 RSPH1Q8WYR4 309 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 PTERQ96BW5 349 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 FAR2Q96K12 515 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 FLRT1Q9NZU1 646 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 MPP6Q9NZW5 540 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 PIN4Q9Y237 131 aaKnown RBP18.29■□□□□ 0.52
UPF1-210ENST00000600689 TRIP12Q14669 1992 aaPredicted RBP18.29■□□□□ 0.52
UPF1-210ENST00000600689 A0A087X1B8 175 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 JAK1P23458 1154 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 IL1RL1Q01638 556 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 GALNT2Q10471 571 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 DENND5AQ6IQ26 1287 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 PRR23BQ6ZRT6 265 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 R3HCC1LQ7Z5L2 792 aaKnown RBP18.29■□□□□ 0.52
UPF1-210ENST00000600689 PLEKHH3Q7Z736 793 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 TNIP3Q96KP6 325 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 SMURF2Q9HAU4 748 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 PTBP2Q9UKA9 531 aaKnown RBP18.29■□□□□ 0.52
UPF1-210ENST00000600689 FBXW11Q9UKB1 542 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 SMIM28A0A1B0GU29 152 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 AXIN1O15169 862 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 ATP6V0D1P61421 351 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 MEP1AQ16819 746 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 KIAA0319Q5VV43 1072 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 DCLRE1AQ6PJP8 1040 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 RAVER1Q8IY67 606 aaKnown RBP18.29■□□□□ 0.52
UPF1-210ENST00000600689 ARL10Q8N8L6 244 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 SDCCAG3Q96C92 435 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 ITCHQ96J02 903 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 CORO1BQ9BR76 489 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 RAD21L1Q9H4I0 556 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 NANOGQ9H9S0 305 aa18.29■□□□□ 0.52
UPF1-210ENST00000600689 MARCH4Q9P2E8 410 aaPredicted RBP18.29■□□□□ 0.52
UPF1-210ENST00000600689 CDK14O94921 469 aa18.28■□□□□ 0.52
UPF1-210ENST00000600689 HLA-DQB2P05538 268 aa18.28■□□□□ 0.52
UPF1-210ENST00000600689 TCF3P15923 654 aa18.28■□□□□ 0.52
UPF1-210ENST00000600689 MAGP20916 626 aa18.28■□□□□ 0.52
UPF1-210ENST00000600689 NFKBIAP25963 317 aa18.28■□□□□ 0.52
UPF1-210ENST00000600689 RFC2P35250 354 aa18.28■□□□□ 0.52
UPF1-210ENST00000600689 CSRP3P50461 194 aa18.28■□□□□ 0.52
UPF1-210ENST00000600689 PAN2Q504Q3 1202 aaKnown RBP18.28■□□□□ 0.52
UPF1-210ENST00000600689 CCNYL2Q5T2Q4 361 aa18.28■□□□□ 0.52
UPF1-210ENST00000600689 C2CD4AQ8NCU7 369 aaPredicted RBP18.28■□□□□ 0.52
UPF1-210ENST00000600689 PPM1MQ96MI6 270 aa18.28■□□□□ 0.52
UPF1-210ENST00000600689 KLHL5Q96PQ7 755 aa18.28■□□□□ 0.52
UPF1-210ENST00000600689 ACTR3BQ9P1U1 418 aa18.28■□□□□ 0.52
UPF1-210ENST00000600689 ERGIC3Q9Y282 383 aa18.28■□□□□ 0.52
UPF1-210ENST00000600689 ZFC3H1O60293 1989 aaKnown RBP18.28■□□□□ 0.52
UPF1-210ENST00000600689 MYBPHLA2RUH7 354 aa18.28■□□□□ 0.52
UPF1-210ENST00000600689 SNAP91O60641 907 aa18.28■□□□□ 0.52
UPF1-210ENST00000600689 PAMP19021 973 aa18.28■□□□□ 0.52
UPF1-210ENST00000600689 POU4F1Q01851 419 aa18.28■□□□□ 0.52
UPF1-210ENST00000600689 CACNB2Q08289 660 aaPredicted RBP18.28■□□□□ 0.52
UPF1-210ENST00000600689 CCDC92Q53HC0 331 aaPredicted RBP18.28■□□□□ 0.52
UPF1-210ENST00000600689 ZNF678Q5SXM1 525 aa18.28■□□□□ 0.52
UPF1-210ENST00000600689 ZNF362Q5T0B9 420 aaPredicted RBP18.28■□□□□ 0.52
UPF1-210ENST00000600689 ABI1Q8IZP0 508 aa18.28■□□□□ 0.52
UPF1-210ENST00000600689 ZNF420Q8TAQ5 688 aaPredicted RBP18.28■□□□□ 0.52
UPF1-210ENST00000600689 CHPT1Q8WUD6 406 aa18.28■□□□□ 0.52
UPF1-210ENST00000600689 ZFP42Q96MM3 310 aa18.28■□□□□ 0.52
UPF1-210ENST00000600689 ACOX2Q99424 681 aa18.28■□□□□ 0.52
UPF1-210ENST00000600689 GLOD4Q9HC38 313 aa18.28■□□□□ 0.52
UPF1-210ENST00000600689 AAR2Q9Y312 384 aaKnown RBP18.28■□□□□ 0.52
UPF1-210ENST00000600689 AQP12BA6NM10 295 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 MSI1O43347 362 aaKnown RBP18.27■□□□□ 0.52
UPF1-210ENST00000600689 CLPXO76031 633 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 HOXD8P13378 290 aaPredicted RBP18.27■□□□□ 0.52
UPF1-210ENST00000600689 AGXTP21549 392 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 RCVRNP35243 200 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 TAF6P49848 677 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 ARSDP51689 593 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 UFM1P61960 85 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 BEX3Q00994 111 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 YWHAHQ04917 246 aaPredicted RBP18.27■□□□□ 0.52
UPF1-210ENST00000600689 KYAT1Q16773 422 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 CRTC3Q6UUV7 619 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 AQP12AQ8IXF9 295 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 ABHD11Q8NFV4 315 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 VWA7Q9Y334 891 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 IQCA1LA6NCM1 817 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 TREHO43280 583 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 PRSS56P0CW18 603 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 AXLP30530 894 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 PLA2G16P53816 162 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 OR4D2P58180 307 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 MTPNP58546 118 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 DNAJB13P59910 316 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 AQP6Q13520 282 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 PSMD5Q16401 504 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 CCL14Q16627 93 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 DCAF4L1Q3SXM0 396 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 NIPAL1Q6NVV3 410 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 SAPCD2Q86UD0 394 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 HOMEZQ8IX15 550 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 CLYBLQ8N0X4 340 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 SFRP1Q8N474 314 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 BIRC7Q96CA5 298 aa18.27■□□□□ 0.52
UPF1-210ENST00000600689 NCAM2O15394 837 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms