RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 TMEM9Q9P0T7 183 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 PILRAQ9UKJ1 303 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 TMEM98Q9Y2Y6 226 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 PLEKHM1Q9Y4G2 1056 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 LRRC53A6NM62 1247 aa17.08■□□□□ 0.32
SMG9-210ENST00000600097 MYBL1P10243 752 aa17.08■□□□□ 0.32
SMG9-210ENST00000600097 CTPS1P17812 591 aa17.08■□□□□ 0.32
SMG9-210ENST00000600097 MAP4P27816 1152 aaKnown RBP17.08■□□□□ 0.32
SMG9-210ENST00000600097 IL1R2P27930 398 aa17.08■□□□□ 0.32
SMG9-210ENST00000600097 ASIC2Q16515 512 aa17.08■□□□□ 0.32
SMG9-210ENST00000600097 SMTNL2Q2TAL5 461 aa17.08■□□□□ 0.32
SMG9-210ENST00000600097 ANKS6Q68DC2 871 aa17.08■□□□□ 0.32
SMG9-210ENST00000600097 WDR74Q6RFH5 385 aaPredicted RBP17.08■□□□□ 0.32
SMG9-210ENST00000600097 RAVER1Q8IY67 606 aaKnown RBP17.08■□□□□ 0.32
SMG9-210ENST00000600097 BMPERQ8N8U9 685 aa17.08■□□□□ 0.32
SMG9-210ENST00000600097 EXD1Q8NHP7 514 aa17.08■□□□□ 0.32
SMG9-210ENST00000600097 SLC37A2Q8TED4 501 aa17.08■□□□□ 0.32
SMG9-210ENST00000600097 HSPH1Q92598 858 aa17.08■□□□□ 0.32
SMG9-210ENST00000600097 ZPBPQ9BS86 351 aa17.08■□□□□ 0.32
SMG9-210ENST00000600097 STN1Q9H668 368 aaKnown RBP17.08■□□□□ 0.32
SMG9-210ENST00000600097 HAUS4Q9H6D7 363 aa17.08■□□□□ 0.32
SMG9-210ENST00000600097 GPN2Q9H9Y4 310 aaPredicted RBP17.08■□□□□ 0.32
SMG9-210ENST00000600097 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.08■□□□□ 0.32
SMG9-210ENST00000600097 CD84Q9UIB8 345 aa17.08■□□□□ 0.32
SMG9-210ENST00000600097 DNPEPQ9ULA0 475 aa17.08■□□□□ 0.32
SMG9-210ENST00000600097 A0A0J9YYE9 177 aa17.07■□□□□ 0.32
SMG9-210ENST00000600097 FZD6O60353 706 aa17.07■□□□□ 0.32
SMG9-210ENST00000600097 TRBC1P01850 177 aa17.07■□□□□ 0.32
SMG9-210ENST00000600097 PDHA1P08559 390 aa17.07■□□□□ 0.32
SMG9-210ENST00000600097 MC2RQ01718 297 aa17.07■□□□□ 0.32
SMG9-210ENST00000600097 PTSQ03393 145 aa17.07■□□□□ 0.32
SMG9-210ENST00000600097 SRSF1Q07955 248 aaKnown RBP eCLIP17.07■□□□□ 0.32
SMG9-210ENST00000600097 NCAPHQ15003 741 aa17.07■□□□□ 0.32
SMG9-210ENST00000600097 PTPRRQ15256 657 aa17.07■□□□□ 0.32
SMG9-210ENST00000600097 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.07■□□□□ 0.32
SMG9-210ENST00000600097 CCDC183Q5T5S1 534 aa17.07■□□□□ 0.32
SMG9-210ENST00000600097 CEACAM20Q6UY09 585 aa17.07■□□□□ 0.32
SMG9-210ENST00000600097 MARK2Q7KZI7 788 aaKnown RBP17.07■□□□□ 0.32
SMG9-210ENST00000600097 ZNF571Q7Z3V5 609 aaPredicted RBP17.07■□□□□ 0.32
SMG9-210ENST00000600097 PTRH1Q86Y79 214 aaKnown RBP17.07■□□□□ 0.32
SMG9-210ENST00000600097 NLGN4XQ8N0W4 816 aa17.07■□□□□ 0.32
SMG9-210ENST00000600097 NLGN4YQ8NFZ3 816 aaPredicted RBP17.07■□□□□ 0.32
SMG9-210ENST00000600097 SCAMP4Q969E2 229 aa17.07■□□□□ 0.32
SMG9-210ENST00000600097 SH3KBP1Q96B97 665 aa17.07■□□□□ 0.32
SMG9-210ENST00000600097 RTP4Q96DX8 246 aa17.07■□□□□ 0.32
SMG9-210ENST00000600097 SPRY4Q9C004 299 aa17.07■□□□□ 0.32
SMG9-210ENST00000600097 POLR1EQ9GZS1 481 aaKnown RBP17.07■□□□□ 0.32
SMG9-210ENST00000600097 HSD3B7Q9H2F3 369 aa17.07■□□□□ 0.32
SMG9-210ENST00000600097 SARS2Q9NP81 518 aaKnown RBP17.07■□□□□ 0.32
SMG9-210ENST00000600097 NT5MQ9NPB1 228 aa17.07■□□□□ 0.32
SMG9-210ENST00000600097 AIPL1Q9NZN9 384 aa17.07■□□□□ 0.32
SMG9-210ENST00000600097 VPS18Q9P253 973 aa17.07■□□□□ 0.32
SMG9-210ENST00000600097 ANAPC2Q9UJX6 822 aa17.07■□□□□ 0.32
SMG9-210ENST00000600097 TRBV23OR9-2A0A075B6M9 112 aa17.06■□□□□ 0.32
SMG9-210ENST00000600097 MAP3K6O95382 1288 aa17.06■□□□□ 0.32
SMG9-210ENST00000600097 CES1P23141 567 aa17.06■□□□□ 0.32
SMG9-210ENST00000600097 PRKCIP41743 596 aa17.06■□□□□ 0.32
SMG9-210ENST00000600097 EPHB1P54762 984 aa17.06■□□□□ 0.32
SMG9-210ENST00000600097 HHEXQ03014 270 aa17.06■□□□□ 0.32
SMG9-210ENST00000600097 PIGHQ14442 188 aaPredicted RBP17.06■□□□□ 0.32
SMG9-210ENST00000600097 RFLNAQ6ZTI6 216 aa17.06■□□□□ 0.32
SMG9-210ENST00000600097 ARHGAP22Q7Z5H3 698 aa17.06■□□□□ 0.32
SMG9-210ENST00000600097 TRIM74Q86UV6 250 aa17.06■□□□□ 0.32
SMG9-210ENST00000600097 ZNF761Q86XN6 746 aaPredicted RBP17.06■□□□□ 0.32
SMG9-210ENST00000600097 TEX26Q8N6G2 289 aa17.06■□□□□ 0.32
SMG9-210ENST00000600097 TEKT4Q8WW24 435 aa17.06■□□□□ 0.32
SMG9-210ENST00000600097 COX14Q96I36 57 aa17.06■□□□□ 0.32
SMG9-210ENST00000600097 TRIT1Q9H3H1 467 aaKnown RBP17.06■□□□□ 0.32
SMG9-210ENST00000600097 FBXO8Q9NRD0 319 aa17.06■□□□□ 0.32
SMG9-210ENST00000600097 HAUS2Q9NVX0 235 aa17.06■□□□□ 0.32
SMG9-210ENST00000600097 MYO1AQ9UBC5 1043 aa17.06■□□□□ 0.32
SMG9-210ENST00000600097 ZNHIT2Q9UHR6 403 aa17.06■□□□□ 0.32
SMG9-210ENST00000600097 A0A0U1RQS6 177 aa17.05■□□□□ 0.32
SMG9-210ENST00000600097 DDX3XO00571 662 aaKnown RBP eCLIP17.05■□□□□ 0.32
SMG9-210ENST00000600097 ASMTLO95671 621 aa17.05■□□□□ 0.32
SMG9-210ENST00000600097 RARAP10276 462 aa17.05■□□□□ 0.32
SMG9-210ENST00000600097 SLC2A4P14672 509 aa17.05■□□□□ 0.32
SMG9-210ENST00000600097 CASRP41180 1078 aa17.05■□□□□ 0.32
SMG9-210ENST00000600097 NOP2P46087 812 aaKnown RBP17.05■□□□□ 0.32
SMG9-210ENST00000600097 STC1P52823 247 aa17.05■□□□□ 0.32
SMG9-210ENST00000600097 EPHA4P54764 986 aa17.05■□□□□ 0.32
SMG9-210ENST00000600097 MC1RQ01726 317 aa17.05■□□□□ 0.32
SMG9-210ENST00000600097 ITKQ08881 620 aa17.05■□□□□ 0.32
SMG9-210ENST00000600097 KLHL30Q0D2K2 578 aa17.05■□□□□ 0.32
SMG9-210ENST00000600097 SNAP47Q5SQN1 464 aa17.05■□□□□ 0.32
SMG9-210ENST00000600097 C9orf43Q8TAL5 461 aaPredicted RBP17.05■□□□□ 0.32
SMG9-210ENST00000600097 AGAP2Q99490 1192 aa17.05■□□□□ 0.32
SMG9-210ENST00000600097 HERPUD2Q9BSE4 406 aa17.05■□□□□ 0.32
SMG9-210ENST00000600097 RIOK2Q9BVS4 552 aaKnown RBP17.05■□□□□ 0.32
SMG9-210ENST00000600097 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.05■□□□□ 0.32
SMG9-210ENST00000600097 ISCUQ9H1K1 167 aa17.05■□□□□ 0.32
SMG9-210ENST00000600097 EPN3Q9H201 632 aa17.05■□□□□ 0.32
SMG9-210ENST00000600097 EPB41L1Q9H4G0 881 aa17.05■□□□□ 0.32
SMG9-210ENST00000600097 PCDH18Q9HCL0 1135 aa17.05■□□□□ 0.32
SMG9-210ENST00000600097 RTN4Q9NQC3 1192 aaKnown RBP17.05■□□□□ 0.32
SMG9-210ENST00000600097 RCOR3Q9P2K3 495 aaPredicted RBP17.05■□□□□ 0.32
SMG9-210ENST00000600097 COL12A1Q99715 3063 aa17.04■□□□□ 0.32
SMG9-210ENST00000600097 A8MU76 341 aa17.04■□□□□ 0.32
SMG9-210ENST00000600097 INPP4BO15327 924 aa17.04■□□□□ 0.32
SMG9-210ENST00000600097 NKX2-8O15522 239 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms