RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 MAIP1Q8WWC4 291 aa15.13■□□□□ 0.01
LIG1-219ENST00000600055 COX14Q96I36 57 aa15.13■□□□□ 0.01
LIG1-219ENST00000600055 HIC2Q96JB3 615 aa15.13■□□□□ 0.01
LIG1-219ENST00000600055 SRPK1Q96SB4 655 aaKnown RBP15.13■□□□□ 0.01
LIG1-219ENST00000600055 OSBPL9Q96SU4 736 aa15.13■□□□□ 0.01
LIG1-219ENST00000600055 SPATA16Q9BXB7 569 aa15.13■□□□□ 0.01
LIG1-219ENST00000600055 NLGN3Q9NZ94 848 aa15.13■□□□□ 0.01
LIG1-219ENST00000600055 CSNK1G3Q9Y6M4 447 aa15.13■□□□□ 0.01
LIG1-219ENST00000600055 DGKBQ9Y6T7 804 aa15.13■□□□□ 0.01
LIG1-219ENST00000600055 NEMP2A6NFY4 417 aa15.12■□□□□ 0.01
LIG1-219ENST00000600055 PDE2AO00408 941 aaPredicted RBP15.12■□□□□ 0.01
LIG1-219ENST00000600055 YY2O15391 372 aa15.12■□□□□ 0.01
LIG1-219ENST00000600055 HMGCLP35914 325 aa15.12■□□□□ 0.01
LIG1-219ENST00000600055 FOXC1Q12948 553 aa15.12■□□□□ 0.01
LIG1-219ENST00000600055 MSLNQ13421 630 aaPredicted RBP15.12■□□□□ 0.01
LIG1-219ENST00000600055 DRICH1Q6PGQ1 229 aaPredicted RBP15.12■□□□□ 0.01
LIG1-219ENST00000600055 CCL4L1Q8NHW4 92 aa15.12■□□□□ 0.01
LIG1-219ENST00000600055 APOLD1Q96LR9 279 aa15.12■□□□□ 0.01
LIG1-219ENST00000600055 TBATAQ96M53 351 aa15.12■□□□□ 0.01
LIG1-219ENST00000600055 PPP1R2P1Q96PQ5 205 aa15.12■□□□□ 0.01
LIG1-219ENST00000600055 TMEM168Q9H0V1 697 aa15.12■□□□□ 0.01
LIG1-219ENST00000600055 TRABDQ9H4I3 376 aa15.12■□□□□ 0.01
LIG1-219ENST00000600055 CARS2Q9HA77 564 aaKnown RBP15.12■□□□□ 0.01
LIG1-219ENST00000600055 ETNK1Q9HBU6 452 aa15.12■□□□□ 0.01
LIG1-219ENST00000600055 ARFGAP3Q9NP61 516 aa15.12■□□□□ 0.01
LIG1-219ENST00000600055 HACD3Q9P035 362 aa15.12■□□□□ 0.01
LIG1-219ENST00000600055 IL17CQ9P0M4 197 aa15.12■□□□□ 0.01
LIG1-219ENST00000600055 SUFUQ9UMX1 484 aa15.12■□□□□ 0.01
LIG1-219ENST00000600055 DRG1Q9Y295 367 aaKnown RBP15.12■□□□□ 0.01
LIG1-219ENST00000600055 SLC17A4Q9Y2C5 497 aa15.12■□□□□ 0.01
LIG1-219ENST00000600055 ZKSCAN5Q9Y2L8 839 aa15.12■□□□□ 0.01
LIG1-219ENST00000600055 KCTD3Q9Y597 815 aa15.12■□□□□ 0.01
LIG1-219ENST00000600055 ARL5AQ9Y689 179 aa15.12■□□□□ 0.01
LIG1-219ENST00000600055 OAS3Q9Y6K5 1087 aaKnown RBP15.12■□□□□ 0.01
LIG1-219ENST00000600055 LY6G6EA0A0G2JKS1 128 aa15.11■□□□□ 0.01
LIG1-219ENST00000600055 LMO7DNF2Z398 122 aa15.11■□□□□ 0.01
LIG1-219ENST00000600055 ZNF185O15231 689 aa15.11■□□□□ 0.01
LIG1-219ENST00000600055 PYGLP06737 847 aa15.11■□□□□ 0.01
LIG1-219ENST00000600055 ANXA6P08133 673 aa15.11■□□□□ 0.01
LIG1-219ENST00000600055 ALPPL2P10696 532 aa15.11■□□□□ 0.01
LIG1-219ENST00000600055 SPINK2P20155 84 aa15.11■□□□□ 0.01
LIG1-219ENST00000600055 MSNP26038 577 aaKnown RBP15.11■□□□□ 0.01
LIG1-219ENST00000600055 PMLP29590 882 aa15.11■□□□□ 0.01
LIG1-219ENST00000600055 RPL22P35268 128 aaKnown RBP15.11■□□□□ 0.01
LIG1-219ENST00000600055 GNPDA1P46926 289 aa15.11■□□□□ 0.01
LIG1-219ENST00000600055 DCDC1P59894 354 aa15.11■□□□□ 0.01
LIG1-219ENST00000600055 GNG11P61952 73 aa15.11■□□□□ 0.01
LIG1-219ENST00000600055 ZNF648Q5T619 568 aaPredicted RBP15.11■□□□□ 0.01
LIG1-219ENST00000600055 MARK2Q7KZI7 788 aaKnown RBP15.11■□□□□ 0.01
LIG1-219ENST00000600055 C17orf53Q8N3J3 647 aaPredicted RBP15.11■□□□□ 0.01
LIG1-219ENST00000600055 FSTL5Q8N475 847 aaPredicted RBP15.11■□□□□ 0.01
LIG1-219ENST00000600055 CHCHD4Q8N4Q1 142 aa15.11■□□□□ 0.01
LIG1-219ENST00000600055 TRAM1L1Q8N609 369 aa15.11■□□□□ 0.01
LIG1-219ENST00000600055 CCDC89Q8N998 374 aa15.11■□□□□ 0.01
LIG1-219ENST00000600055 AP1M1Q9BXS5 423 aa15.11■□□□□ 0.01
LIG1-219ENST00000600055 LRRC40Q9H9A6 602 aa15.11■□□□□ 0.01
LIG1-219ENST00000600055 RAD18Q9NS91 495 aa15.11■□□□□ 0.01
LIG1-219ENST00000600055 PIH1D1Q9NWS0 290 aaKnown RBP15.11■□□□□ 0.01
LIG1-219ENST00000600055 SNX12Q9UMY4 172 aa15.11■□□□□ 0.01
LIG1-219ENST00000600055 APOBEC2Q9Y235 224 aaKnown RBP15.11■□□□□ 0.01
LIG1-219ENST00000600055 PLEKHM1Q9Y4G2 1056 aa15.11■□□□□ 0.01
LIG1-219ENST00000600055 U3KQA8 63 aa15.11■□□□□ 0.01
LIG1-219ENST00000600055 TDRD6O60522 2096 aaKnown RBP15.11■□□□□ 0.01
LIG1-219ENST00000600055 PCNX2A6NKB5 2137 aa15.11■□□□□ 0.01
LIG1-219ENST00000600055 HYAL3O43820 417 aaPredicted RBP15.1■□□□□ 0.01
LIG1-219ENST00000600055 DKK1O94907 266 aa15.1■□□□□ 0.01
LIG1-219ENST00000600055 ASMTLO95671 621 aa15.1■□□□□ 0.01
LIG1-219ENST00000600055 AP2A1O95782 977 aa15.1■□□□□ 0.01
LIG1-219ENST00000600055 IVLP07476 585 aa15.1■□□□□ 0.01
LIG1-219ENST00000600055 CKMT2P17540 419 aa15.1■□□□□ 0.01
LIG1-219ENST00000600055 TPH1P17752 444 aa15.1■□□□□ 0.01
LIG1-219ENST00000600055 ACTN2P35609 894 aa15.1■□□□□ 0.01
LIG1-219ENST00000600055 FDFT1P37268 417 aa15.1■□□□□ 0.01
LIG1-219ENST00000600055 ACADVLP49748 655 aa15.1■□□□□ 0.01
LIG1-219ENST00000600055 ELOCQ15369 112 aa15.1■□□□□ 0.01
LIG1-219ENST00000600055 HS1BP3Q53T59 392 aa15.1■□□□□ 0.01
LIG1-219ENST00000600055 TTC27Q6P3X3 843 aa15.1■□□□□ 0.01
LIG1-219ENST00000600055 GSTA5Q7RTV2 222 aa15.1■□□□□ 0.01
LIG1-219ENST00000600055 DUSP23Q9BVJ7 150 aa15.1■□□□□ 0.01
LIG1-219ENST00000600055 CDH19Q9H159 772 aa15.1■□□□□ 0.01
LIG1-219ENST00000600055 ARNT2Q9HBZ2 717 aa15.1■□□□□ 0.01
LIG1-219ENST00000600055 IL26Q9NPH9 171 aa15.1■□□□□ 0.01
LIG1-219ENST00000600055 RAB6BQ9NRW1 208 aa15.1■□□□□ 0.01
LIG1-219ENST00000600055 PAK5Q9P286 719 aa15.1■□□□□ 0.01
LIG1-219ENST00000600055 NFKBIL1Q9UBC1 381 aaPredicted RBP15.1■□□□□ 0.01
LIG1-219ENST00000600055 TMPRSS11EQ9UL52 423 aa15.1■□□□□ 0.01
LIG1-219ENST00000600055 TTC7AQ9ULT0 858 aaPredicted RBP15.1■□□□□ 0.01
LIG1-219ENST00000600055 DOLKQ9UPQ8 538 aa15.1■□□□□ 0.01
LIG1-219ENST00000600055 PCYT1BQ9Y5K3 369 aaPredicted RBP15.1■□□□□ 0.01
LIG1-219ENST00000600055 ST14Q9Y5Y6 855 aa15.1■□□□□ 0.01
LIG1-219ENST00000600055 COL5A1P20908 1838 aaPredicted RBP15.09■□□□□ 0.01
LIG1-219ENST00000600055 PGRMC1O00264 195 aaKnown RBP15.09■□□□□ 0.01
LIG1-219ENST00000600055 TPP1O14773 563 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 STX7O15400 261 aaKnown RBP15.09■□□□□ 0.01
LIG1-219ENST00000600055 GPR39O43194 453 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 PSMD3O43242 534 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 CA5AP35218 305 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 SPAM1P38567 509 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 GRIA1P42261 906 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 CLDN6P56747 220 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms