RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 DNAL1Q4LDG9 190 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 MPPE1Q53F39 396 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 ARMC12Q5T9G4 340 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 ASTLQ6HA08 431 aaPredicted RBP14.41□□□□□ -0.1
VRK3-217ENST00000599538 CCDC149Q6ZUS6 474 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 ACAD11Q709F0 780 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 TMEM25Q86YD3 366 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 SIDT2Q8NBJ9 832 aaKnown RBP14.41□□□□□ -0.1
VRK3-217ENST00000599538 FIBINQ8TAL6 211 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 MYLIPQ8WY64 445 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 CMTM5Q96DZ9 223 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 ASAH2Q9NR71 780 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 ABCB8Q9NUT2 735 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 TAS2R13Q9NYV9 303 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 NOP53Q9NZM5 478 aaKnown RBP14.41□□□□□ -0.1
VRK3-217ENST00000599538 INSL6Q9Y581 213 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 A0A1B0GTL3 188 aa14.4□□□□□ -0.1
VRK3-217ENST00000599538 GAPDHSO14556 408 aaPredicted RBP14.4□□□□□ -0.1
VRK3-217ENST00000599538 MOSPD3O75425 235 aa14.4□□□□□ -0.1
VRK3-217ENST00000599538 PDE5AO76074 875 aa14.4□□□□□ -0.1
VRK3-217ENST00000599538 GLUD1P00367 558 aa14.4□□□□□ -0.1
VRK3-217ENST00000599538 HK2P52789 917 aa14.4□□□□□ -0.1
VRK3-217ENST00000599538 TSNQ15631 228 aaKnown RBP14.4□□□□□ -0.1
VRK3-217ENST00000599538 SLC5A9Q2M3M2 681 aa14.4□□□□□ -0.1
VRK3-217ENST00000599538 RETSATQ6NUM9 610 aa14.4□□□□□ -0.1
VRK3-217ENST00000599538 TAS2R42Q7RTR8 314 aa14.4□□□□□ -0.1
VRK3-217ENST00000599538 SLC22A9Q8IVM8 553 aa14.4□□□□□ -0.1
VRK3-217ENST00000599538 DTX3LQ8TDB6 740 aa14.4□□□□□ -0.1
VRK3-217ENST00000599538 L3HYPDHQ96EM0 354 aa14.4□□□□□ -0.1
VRK3-217ENST00000599538 LMLNQ96KR4 655 aa14.4□□□□□ -0.1
VRK3-217ENST00000599538 TCF12Q99081 682 aa14.4□□□□□ -0.1
VRK3-217ENST00000599538 GPR63Q9BZJ6 419 aa14.4□□□□□ -0.1
VRK3-217ENST00000599538 CCDC68Q9H2F9 335 aa14.4□□□□□ -0.1
VRK3-217ENST00000599538 POPDC3Q9HBV1 291 aa14.4□□□□□ -0.1
VRK3-217ENST00000599538 HCFC2Q9Y5Z7 792 aa14.4□□□□□ -0.1
VRK3-217ENST00000599538 NOTCH4Q99466 2003 aa14.4□□□□□ -0.1
VRK3-217ENST00000599538 H7C0S8 307 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 BNIP3LO60238 219 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 TSPAN12O95859 305 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 PKMP14618 531 aaKnown RBP14.39□□□□□ -0.11
VRK3-217ENST00000599538 EZRP15311 586 aaKnown RBP14.39□□□□□ -0.11
VRK3-217ENST00000599538 HMGCLP35914 325 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 AP1S1P61966 158 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 HERVK_113P63132 956 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 SH3BP2P78314 561 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 NTHL1P78549 312 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 RCN1Q15293 331 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 TEAD2Q15562 447 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 SWT1Q5T5J6 900 aaKnown RBP14.39□□□□□ -0.11
VRK3-217ENST00000599538 FAM151BQ6UXP7 276 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 RIPOR1Q6ZS17 1223 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 SNX32Q86XE0 403 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 DEFB107AQ8IZN7 70 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 ARHGAP24Q8N264 748 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 MRPL43Q8N983 215 aaKnown RBP14.39□□□□□ -0.11
VRK3-217ENST00000599538 ACDQ96AP0 544 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 ERVK-6Q9BXR3 956 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 DCLRE1BQ9H816 532 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 MAGEE1Q9HCI5 957 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 KIAA1522Q9P206 1035 aaPredicted RBP14.39□□□□□ -0.11
VRK3-217ENST00000599538 PACSIN3Q9UKS6 424 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 COPG1Q9Y678 874 aaKnown RBP14.39□□□□□ -0.11
VRK3-217ENST00000599538 OAS3Q9Y6K5 1087 aaKnown RBP14.39□□□□□ -0.11
VRK3-217ENST00000599538 SLC4A7Q9Y6M7 1214 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 MTCL1Q9Y4B5 1905 aaKnown RBP14.39□□□□□ -0.11
VRK3-217ENST00000599538 CARNS1A5YM72 827 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 HTRA2O43464 458 aaPredicted RBP14.39□□□□□ -0.11
VRK3-217ENST00000599538 ARHGEF15O94989 841 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 CLDN7O95471 211 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 HOXB8P17481 243 aaPredicted RBP14.39□□□□□ -0.11
VRK3-217ENST00000599538 IRS1P35568 1242 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 CLCN4P51793 760 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 SESN3P58005 492 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 NFKB2Q00653 900 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 BCL2L1Q07817 233 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 TMEM240Q5SV17 173 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 MPP7Q5T2T1 576 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 ELMOD1Q8N336 334 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 CPSF7Q8N684 471 aaKnown RBP14.39□□□□□ -0.11
VRK3-217ENST00000599538 SNX31Q8N9S9 440 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 CD200R1Q8TD46 325 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 POF1BQ8WVV4 589 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 KIAA1191Q96A73 305 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 CCDC28BQ9BUN5 200 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 C15orf41Q9Y2V0 281 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 TRAF6Q9Y4K3 522 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 PTGDR2Q9Y5Y4 395 aa14.39□□□□□ -0.11
VRK3-217ENST00000599538 ATP6AP2A0A1C7CYW4 349 aa14.38□□□□□ -0.11
VRK3-217ENST00000599538 NPEPPSL1A6NEC2 478 aa14.38□□□□□ -0.11
VRK3-217ENST00000599538 GOLGA8CPA6NN73 597 aa14.38□□□□□ -0.11
VRK3-217ENST00000599538 F8W8V4 182 aa14.38□□□□□ -0.11
VRK3-217ENST00000599538 AIM2O14862 343 aa14.38□□□□□ -0.11
VRK3-217ENST00000599538 SMIM24O75264 130 aa14.38□□□□□ -0.11
VRK3-217ENST00000599538 TBX10O75333 385 aa14.38□□□□□ -0.11
VRK3-217ENST00000599538 ATP6AP2O75787 350 aa14.38□□□□□ -0.11
VRK3-217ENST00000599538 PSMG1O95456 288 aa14.38□□□□□ -0.11
VRK3-217ENST00000599538 SRCP12931 536 aa14.38□□□□□ -0.11
VRK3-217ENST00000599538 CTNNB1P35222 781 aa14.38□□□□□ -0.11
VRK3-217ENST00000599538 HNF1BP35680 557 aa14.38□□□□□ -0.11
VRK3-217ENST00000599538 PPARGP37231 505 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms