RNA–Protein interactions for RNA: ENST00000598969.5

COPE-208, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 5

Gene COPE, Length 1,770 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-208ENST00000598969 GABPB2Q8TAK5 448 aaPredicted RBP20.83■□□□□ 0.93
COPE-208ENST00000598969 MZB1Q8WU39 189 aa20.83■□□□□ 0.93
COPE-208ENST00000598969 CENPTQ96BT3 561 aa20.83■□□□□ 0.93
COPE-208ENST00000598969 ALKBH8Q96BT7 664 aaKnown RBP20.83■□□□□ 0.93
COPE-208ENST00000598969 CPNE1Q99829 537 aa20.83■□□□□ 0.93
COPE-208ENST00000598969 SSU72Q9NP77 194 aaKnown RBP20.83■□□□□ 0.93
COPE-208ENST00000598969 INTS9Q9NV88 658 aaKnown RBP20.83■□□□□ 0.93
COPE-208ENST00000598969 NSMCE4AQ9NXX6 385 aa20.83■□□□□ 0.93
COPE-208ENST00000598969 PKD2L2Q9NZM6 624 aa20.83■□□□□ 0.93
COPE-208ENST00000598969 USP36Q9P275 1121 aaKnown RBP20.83■□□□□ 0.93
COPE-208ENST00000598969 FZD4Q9ULV1 537 aa20.83■□□□□ 0.93
COPE-208ENST00000598969 FNDC3AQ9Y2H6 1198 aaKnown RBP20.83■□□□□ 0.93
COPE-208ENST00000598969 ZNF106Q9H2Y7 1883 aaKnown RBP20.83■□□□□ 0.92
COPE-208ENST00000598969 TECTAO75443 2155 aa20.83■□□□□ 0.92
COPE-208ENST00000598969 A0A1W2PPM1 405 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 TSPAN6O43657 245 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 PI15O43692 258 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 FAM155BO75949 473 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 PRSS56P0CW18 603 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 CHN1P15882 459 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 KRT4P19013 534 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 MC4RP32245 332 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 FOXN2P32314 431 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 SPAM1P38567 509 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 ETV3P41162 512 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 TPMTP51580 245 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 ADPRHP54922 357 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 ANO7Q6IWH7 933 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 KBTBD6Q86V97 674 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 PNPLA1Q8N8W4 532 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 SGSM3Q96HU1 749 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 ITM2CQ9NQX7 267 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 NKIRAS1Q9NYS0 192 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 COQ6Q9Y2Z9 468 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 LRRK1Q38SD2 2015 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 PRPF4O43172 522 aaKnown RBP eCLIP20.82■□□□□ 0.922e-8■■■■■ 28.6
COPE-208ENST00000598969 C6P13671 934 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 CREB1P16220 341 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 SLC18A1P54219 525 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 PTPN5P54829 565 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 THOC5Q13769 683 aaKnown RBP20.82■□□□□ 0.92
COPE-208ENST00000598969 FAM151BQ6UXP7 276 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 PACS1Q6VY07 963 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 DENND6AQ8IWF6 608 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 OR14C36Q8NHC7 312 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 MDM1Q8TC05 714 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 CXorf40AQ8TE69 158 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 FAM167BQ9BTA0 163 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 CD84Q9UIB8 345 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 NCKAP1Q9Y2A7 1128 aa20.82■□□□□ 0.92
COPE-208ENST00000598969 FAM47DPA6NHR8 397 aa20.81■□□□□ 0.92
COPE-208ENST00000598969 TRIM49D1C9J1S8 452 aa20.81■□□□□ 0.92
COPE-208ENST00000598969 GPR39O43194 453 aa20.81■□□□□ 0.92
COPE-208ENST00000598969 GP5P40197 560 aa20.81■□□□□ 0.92
COPE-208ENST00000598969 SLC1A2P43004 574 aa20.81■□□□□ 0.92
COPE-208ENST00000598969 CDKN1CP49918 316 aaPredicted RBP20.81■□□□□ 0.92
COPE-208ENST00000598969 CREB5Q02930 508 aa20.81■□□□□ 0.92
COPE-208ENST00000598969 DNAJC3Q13217 504 aa20.81■□□□□ 0.92
COPE-208ENST00000598969 SEMA3AQ14563 771 aa20.81■□□□□ 0.92
COPE-208ENST00000598969 ACOX1Q15067 660 aa20.81■□□□□ 0.92
COPE-208ENST00000598969 TMEM31Q5JXX7 168 aa20.81■□□□□ 0.92
COPE-208ENST00000598969 GRTP1Q5TC63 336 aa20.81■□□□□ 0.92
COPE-208ENST00000598969 TTC19Q6DKK2 380 aaPredicted RBP20.81■□□□□ 0.92
COPE-208ENST00000598969 ZNF470Q6ECI4 717 aa20.81■□□□□ 0.92
COPE-208ENST00000598969 FAM124AQ86V42 546 aa20.81■□□□□ 0.92
COPE-208ENST00000598969 RAVER1Q8IY67 606 aaKnown RBP20.81■□□□□ 0.92
COPE-208ENST00000598969 C4orf33Q8N1A6 199 aa20.81■□□□□ 0.92
COPE-208ENST00000598969 PGBD3Q8N328 593 aa20.81■□□□□ 0.92
COPE-208ENST00000598969 GPR150Q8NGU9 434 aa20.81■□□□□ 0.92
COPE-208ENST00000598969 PLEKHG4BQ96PX9 1271 aa20.81■□□□□ 0.92
COPE-208ENST00000598969 CATSPERZQ9NTU4 200 aa20.81■□□□□ 0.92
COPE-208ENST00000598969 NFKBIL1Q9UBC1 381 aaPredicted RBP20.81■□□□□ 0.92
COPE-208ENST00000598969 APPL1Q9UKG1 709 aa20.81■□□□□ 0.92
COPE-208ENST00000598969 NUMA1Q14980 2115 aa20.81■□□□□ 0.92
COPE-208ENST00000598969 GLYATL1P3A0A0U1RQE8 302 aa20.8■□□□□ 0.92
COPE-208ENST00000598969 RGSL1A5PLK6 1076 aa20.8■□□□□ 0.92
COPE-208ENST00000598969 CD3EAPO15446 510 aaKnown RBP20.8■□□□□ 0.92
COPE-208ENST00000598969 SRP72O76094 671 aaKnown RBP20.8■□□□□ 0.92
COPE-208ENST00000598969 PCDH8O95206 1070 aa20.8■□□□□ 0.92
COPE-208ENST00000598969 PRAMEF1O95521 474 aa20.8■□□□□ 0.92
COPE-208ENST00000598969 CA5AP35218 305 aa20.8■□□□□ 0.92
COPE-208ENST00000598969 DCDC1P59894 354 aa20.8■□□□□ 0.92
COPE-208ENST00000598969 SFSWAPQ12872 951 aaKnown RBP20.8■□□□□ 0.92
COPE-208ENST00000598969 CTBP1Q13363 440 aa20.8■□□□□ 0.92
COPE-208ENST00000598969 CHRNA6Q15825 494 aa20.8■□□□□ 0.92
COPE-208ENST00000598969 LDB1Q86U70 411 aaPredicted RBP20.8■□□□□ 0.92
COPE-208ENST00000598969 PIANPQ8IYJ0 282 aa20.8■□□□□ 0.92
COPE-208ENST00000598969 C2CD4AQ8NCU7 369 aaPredicted RBP20.8■□□□□ 0.92
COPE-208ENST00000598969 CALML6Q8TD86 181 aa20.8■□□□□ 0.92
COPE-208ENST00000598969 SCAMP4Q969E2 229 aa20.8■□□□□ 0.92
COPE-208ENST00000598969 DTD2Q96FN9 168 aa20.8■□□□□ 0.92
COPE-208ENST00000598969 FAM96AQ9H5X1 160 aa20.8■□□□□ 0.92
COPE-208ENST00000598969 FBXO5Q9UKT4 447 aa20.8■□□□□ 0.92
COPE-208ENST00000598969 ZFR2Q9UPR6 939 aaKnown RBP20.8■□□□□ 0.92
COPE-208ENST00000598969 WNT9AO14904 365 aa20.8■□□□□ 0.92
COPE-208ENST00000598969 RECQL5O94762 991 aaPredicted RBP20.8■□□□□ 0.92
COPE-208ENST00000598969 IGLV3-19P01714 112 aa20.8■□□□□ 0.92
COPE-208ENST00000598969 GABRB3P28472 473 aa20.8■□□□□ 0.92
COPE-208ENST00000598969 MPP1Q00013 466 aa20.8■□□□□ 0.92
COPE-208ENST00000598969 PPARDQ03181 441 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms