RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 VASPP50552 380 aaPredicted RBP13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 TPI1P60174 286 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 KLF1Q13351 362 aaPredicted RBP13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 AMZ1Q400G9 498 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 ODF2Q5BJF6 829 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 SEL1L2Q5TEA6 688 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 C16orf46Q6P387 395 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 C22orf39Q6P5X5 142 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 LINGO4Q6UY18 593 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 MACC1Q6ZN28 852 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 BBS12Q6ZW61 710 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 PARS2Q7L3T8 475 aaKnown RBP13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 SLC13A5Q86YT5 568 aaPredicted RBP13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 SFTPA2Q8IWL1 248 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 UNC5BQ8IZJ1 945 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 CPT1CQ8TCG5 803 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 ZNF592Q92610 1267 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 RPRD1AQ96P16 312 aaPredicted RBP13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 ZYG11BQ9C0D3 744 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 KLC2Q9H0B6 622 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 SETD2Q9BYW2 2564 aaPredicted RBP13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 F8P00451 2351 aa13.93□□□□□ -0.18
SHKBP1-218ENST00000598907 CEP104O60308 925 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 EPHB2P29323 1055 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 CETN2P41208 172 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 ABL2P42684 1182 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 PAFAH1B3Q15102 231 aaKnown RBP13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 ALFQ53S48 1182 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 TTC39BQ5VTQ0 682 aaPredicted RBP13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 DPY19L3Q6ZPD9 716 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 ASB18Q6ZVZ8 466 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 CCDC50Q8IVM0 306 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 PLD5Q8N7P1 536 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 DENND6BQ8NEG7 585 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 PDCD6IPQ8WUM4 868 aaKnown RBP13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 ART4Q93070 314 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 KIAA1143Q96AT1 154 aaPredicted RBP13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 MS4A14Q96JA4 679 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 SLC45A3Q96JT2 553 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 LENG8Q96PV6 779 aaPredicted RBP13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 TAAR9Q96RI9 348 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 C1QTNF2Q9BXJ5 285 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 CDH19Q9H159 772 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 CATSPERBQ9H7T0 1116 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 ETNK2Q9NVF9 386 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 TMEM248Q9NWD8 314 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 MPP6Q9NZW5 540 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 RNF14Q9UBS8 474 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 HS3ST2Q9Y278 367 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 B3GALT1Q9Y5Z6 326 aa13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 ZNF106Q9H2Y7 1883 aaKnown RBP13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 RP1L1Q8IWN7 2480 aaPredicted RBP13.92□□□□□ -0.18
SHKBP1-218ENST00000598907 TCRBV7S2A1N4TA0A589 114 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 B4DGG1 531 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 CST8O60676 142 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 DDAH2O95865 285 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 FGF3P11487 239 aaPredicted RBP13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 ZFXP17010 805 aaPredicted RBP13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 HK3P52790 923 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 CDH4P55283 916 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 TUBB2AQ13885 445 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 ARHGEF7Q14155 803 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 TFDP2Q14188 446 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 SIX1Q15475 284 aaPredicted RBP13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 ALG11Q2TAA5 492 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 CERCAMQ5T4B2 595 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 AFMIDQ63HM1 303 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 NCBP2-AS2Q69YL0 99 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 ZC3H18Q86VM9 953 aaKnown RBP13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 GKN2Q86XP6 184 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 RFX6Q8HWS3 928 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 RTL3Q8N8U3 475 aaKnown RBP13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 OR6C4Q8NGE1 309 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 MOCOSQ96EN8 888 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 CCDC74BQ96LY2 380 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 TUBB2BQ9BVA1 445 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 HEMGNQ9BXL5 484 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 MAK16Q9BXY0 300 aaKnown RBP13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 NDFIP2Q9NV92 336 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 VPS51Q9UID3 782 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 CDC23Q9UJX2 597 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 OR51B4Q9Y5P0 310 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 WASF2Q9Y6W5 498 aa13.91□□□□□ -0.18
SHKBP1-218ENST00000598907 LRP4O75096 1905 aa13.9□□□□□ -0.18
SHKBP1-218ENST00000598907 MKRN2OSH3BPM6 223 aa13.9□□□□□ -0.18
SHKBP1-218ENST00000598907 APOL1O14791 398 aa13.9□□□□□ -0.18
SHKBP1-218ENST00000598907 DAPK3O43293 454 aa13.9□□□□□ -0.18
SHKBP1-218ENST00000598907 CLDN11O75508 207 aa13.9□□□□□ -0.18
SHKBP1-218ENST00000598907 URI1O94763 535 aaPredicted RBP13.9□□□□□ -0.18
SHKBP1-218ENST00000598907 TJP3O95049 919 aa13.9□□□□□ -0.18
SHKBP1-218ENST00000598907 FGGP02679 453 aa13.9□□□□□ -0.18
SHKBP1-218ENST00000598907 GLB1P16278 677 aa13.9□□□□□ -0.18
SHKBP1-218ENST00000598907 MAPKAPK2P49137 400 aa13.9□□□□□ -0.18
SHKBP1-218ENST00000598907 BLKP51451 505 aa13.9□□□□□ -0.18
SHKBP1-218ENST00000598907 LLGL1Q15334 1064 aa13.9□□□□□ -0.18
SHKBP1-218ENST00000598907 EIF2S3LQ2VIR3 472 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-218ENST00000598907 LRRC73Q5JTD7 316 aa13.9□□□□□ -0.18
SHKBP1-218ENST00000598907 KAZNQ674X7 775 aa13.9□□□□□ -0.18
SHKBP1-218ENST00000598907 RWDD4Q6NW29 188 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-218ENST00000598907 LVRNQ6Q4G3 990 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms