RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 NPHS1O60500 1241 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 RHOBTB1O94844 696 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 ATP6V1G2O95670 118 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 HNRNPLP14866 589 aaKnown RBP eCLIP16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 HMGCLP35914 325 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 ASPHQ12797 758 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 ILF2Q12905 390 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 PDAP1Q13442 181 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 CBX2Q14781 532 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 ZNF77Q15935 545 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 DUSP6Q16828 381 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 PTPRNQ16849 979 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 PAQR3Q6TCH7 311 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 FBXO27Q8NI29 283 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 IRF7Q92985 503 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 PPP1R36Q96LQ0 422 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 OR52B2Q96RD2 323 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 BTBD10Q9BSF8 475 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 OSBPL1AQ9BXW6 950 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 POPDC3Q9HBV1 291 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 TAS2R1Q9NYW7 299 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 A0A0J9YYE9 177 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 TMEM233B4DJY2 109 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 IGSF6O95976 241 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 TRBC1P01850 177 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 JUNP05412 331 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 CEBPBP17676 345 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 SP100P23497 879 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 OR4D1Q15615 310 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 CDKN3Q16667 212 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 CTSL3PQ5NE16 218 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 PIWIL4Q7Z3Z4 852 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 ZNF707Q96C28 371 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 CDCA3Q99618 268 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 SLC30A3Q99726 388 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 IGFLR1Q9H665 355 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 WDR55Q9H6Y2 383 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 NCKIPSDQ9NZQ3 722 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 HS3ST2Q9Y278 367 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 PKP3Q9Y446 797 aa16.97■□□□□ 0.31
SHKBP1-216ENST00000598201 GOLGA8QA0A0J9YX86 632 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 GOLGA8OA6NCC3 632 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 GOLGA8NF8WBI6 632 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 HDAC3O15379 428 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 BNIP3LO60238 219 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 SOCS5O75159 536 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 XYLBO75191 536 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 HNRNPA1P09651 372 aaKnown RBP eCLIP16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 CA5AP35218 305 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 HNF1BP35680 557 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 MAPK8P45983 427 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 KDSRQ06136 332 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 LY6G5CQ5SRR4 150 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 KDM1BQ8NB78 822 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 GPR21Q99679 349 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 ATP13A3Q9H7F0 1226 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 TNFRSF12AQ9NP84 129 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 SPHK2Q9NRA0 654 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 TAS2R13Q9NYV9 303 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 BAIAP2L1Q9UHR4 511 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 TAGLN3Q9UI15 199 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 SLCO3A1Q9UIG8 710 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 IKZF3Q9UKT9 509 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 WNT6Q9Y6F9 365 aa16.96■□□□□ 0.31
SHKBP1-216ENST00000598201 A8MX80 341 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 E9PBE3 544 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 GAPDHSO14556 408 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 TRIM24O15164 1050 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 KLHL41O60662 606 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 TYRP14679 529 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 FOSL2P15408 326 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 AOC1P19801 751 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 TTPAP49638 278 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 RPL26P61254 145 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 HYAL1Q12794 435 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 RIPK1Q13546 671 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 SEL1L3Q68CR1 1132 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 C22orf39Q6P5X5 142 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 TAS2R42Q7RTR8 314 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 METTL3Q86U44 580 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 FAM13CQ8NE31 585 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 EXT2Q93063 718 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 CCDC126Q96EE4 140 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 CCDC97Q96F63 343 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 CNDP1Q96KN2 507 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 NUF2Q9BZD4 464 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 CCDC68Q9H2F9 335 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 ZFYVE1Q9HBF4 777 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 HECAQ9UBI9 543 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 RPL26L1Q9UNX3 145 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 SORCS3Q9UPU3 1222 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 C1orf232A0A0U1RR37 186 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 NEMP1O14524 444 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 GYG2O15488 501 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 GSC2O15499 205 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 NIPSNAP2O75323 286 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 CLDN7O95471 211 aa16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 PABPC1P11940 636 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-216ENST00000598201 PKMP14618 531 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms