RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 UGT1A10Q9HAW8 530 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 UGT1A8Q9HAW9 530 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 IL21RQ9HBE5 538 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 ZDHHC18Q9NUE0 388 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 SYBUQ9NX95 663 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 ASIC3Q9UHC3 531 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 FKBPLQ9UIM3 349 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 RIMKLBQ9ULI2 386 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 SLC6A14Q9UN76 642 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 OAS3Q9Y6K5 1087 aaKnown RBP10.52□□□□□ -0.73
LIG1-210ENST00000596332 CACNA1EQ15878 2313 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 KNL1Q8NG31 2342 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 TRBV5-4A0A0C4DH59 114 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 ZCWPW2A0A1B0GU75 182 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 GOLGA6CA6NDK9 693 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 GOLGA6BA6NDN3 693 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 A6NNZ2 444 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 EFCAB8A8MWE9 144 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 E7ESA3 106 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 E7EVH7 732 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 ARHGAP33O14559 1287 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 FPGTO14772 594 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 SGTAO43765 313 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 GDF9O60383 454 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 LRP3O75074 770 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 PCCBP05166 539 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 CEACAM5P06731 702 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 GOLGA6DP0CG33 693 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 THEGLP0DJG4 465 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 ENGP17813 658 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 ADRA1DP25100 572 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 NMBRP28336 390 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 ARCN1P48444 511 aaKnown RBP10.51□□□□□ -0.73
LIG1-210ENST00000596332 YPEL5P62699 121 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 OVGP1Q12889 678 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 GRIK2Q13002 908 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 PDE1CQ14123 709 aaPredicted RBP10.51□□□□□ -0.73
LIG1-210ENST00000596332 STAT4Q14765 748 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 MORF4L2Q15014 288 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 ZNF423Q2M1K9 1284 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 ATP13A5Q4VNC0 1218 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 PCID2Q5JVF3 399 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 ZNF648Q5T619 568 aaPredicted RBP10.51□□□□□ -0.73
LIG1-210ENST00000596332 TSTD2Q5T7W7 516 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 XKR5Q6UX68 686 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 PPP1R21Q6ZMI0 780 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 DBX2Q6ZNG2 339 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 MAATS1Q7Z4T9 603 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 TMEM135Q86UB9 458 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 PIANPQ8IYJ0 282 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 TRAM1L1Q8N609 369 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 CEP76Q8TAP6 659 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 CCHCR1Q8TD31 782 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 STYXQ8WUJ0 223 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 LRRC45Q96CN5 670 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 AP2M1Q96CW1 435 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 KLHDC7BQ96G42 594 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 FRMD8Q9BZ67 464 aaPredicted RBP10.51□□□□□ -0.73
LIG1-210ENST00000596332 DPH5Q9H2P9 285 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 TCEAL2Q9H3H9 227 aaPredicted RBP10.51□□□□□ -0.73
LIG1-210ENST00000596332 AASDHPPTQ9NRN7 309 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 KCTD5Q9NXV2 234 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 GOLGA6AQ9NYA3 693 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 RAB23Q9ULC3 237 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 TCAF1Q9Y4C2 921 aa10.51□□□□□ -0.73
LIG1-210ENST00000596332 RIF1Q5UIP0 2472 aaKnown RBP10.51□□□□□ -0.73
LIG1-210ENST00000596332 ESYT3A0FGR9 886 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 CCDC78A2IDD5 438 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 CTAGE15A4D2H0 777 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 OR51F1A6NGY5 319 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 PRR19A6NJB7 356 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 C2orf81A6NN90 581 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 PRR5-ARHGAP8B1AHC4 643 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 TOR1BO14657 336 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 DNAJC6O75061 913 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 CRTAMO95727 393 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 CTAGE8P0CG41 777 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 TSHRP16473 764 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 DPP6P42658 865 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 RXRGP48443 463 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 POLD2P49005 469 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 KIAA1024LP59773 190 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 TMPRSS15P98073 1019 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 CDK3Q00526 305 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 B4GALNT1Q00973 533 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 SEMA3AQ14563 771 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 HLA-BQ31612 363 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 ALS2CLQ60I27 953 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 CES3Q6UWW8 571 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 CTAGE6Q86UF2 777 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 TRIM74Q86UV6 250 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 HEATR4Q86WZ0 1026 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 CTAGE4Q8IX94 777 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 PAF1Q8N7H5 531 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 CEP112Q8N8E3 955 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 DNAAF3Q8N9W5 541 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 FAM174AQ8TBP5 190 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 BTN2A2Q8WVV5 523 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 OR1E3Q8WZA6 343 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 MFSD3Q96ES6 412 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms