RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 ADAMTS14Q8WXS8 1223 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 SCARF2Q96GP6 870 aaPredicted RBP11.09□□□□□ -0.63
VRK3-210ENST00000596121 MS4A14Q96JA4 679 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 TBATAQ96M53 351 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 GPR63Q9BZJ6 419 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 SLC13A1Q9BZW2 595 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 TMEM168Q9H0V1 697 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 CYP4F12Q9HCS2 524 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 PHPT1Q9NRX4 125 aaPredicted RBP11.09□□□□□ -0.63
VRK3-210ENST00000596121 KCTD5Q9NXV2 234 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 SMARCAL1Q9NZC9 954 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 SLC17A4Q9Y2C5 497 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 PRSS38A1L453 326 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 GAPDHSO14556 408 aaPredicted RBP11.08□□□□□ -0.64
VRK3-210ENST00000596121 STK10O94804 968 aaKnown RBP11.08□□□□□ -0.64
VRK3-210ENST00000596121 TNFP01375 233 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 ZSCAN5DPP0CG00 497 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 CKMT2P17540 419 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 HLA-DPA1P20036 260 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 SHC2P98077 582 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 CCNG2Q16589 344 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 KHDC1Q4VXA5 237 aaKnown RBP11.08□□□□□ -0.64
VRK3-210ENST00000596121 CCDC70Q6NSX1 233 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 DHRS13Q6UX07 377 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 SLC35F3Q8IY50 421 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 PRELID2Q8N945 189 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 FAM181AQ8N9Y4 354 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 CCHCR1Q8TD31 782 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 BLOC1S5Q8TDH9 187 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 COG1Q8WTW3 980 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 HIC2Q96JB3 615 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 SCNM1Q9BWG6 230 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 BOCQ9BWV1 1114 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 SUDS3Q9H7L9 328 aaPredicted RBP11.08□□□□□ -0.64
VRK3-210ENST00000596121 CARS2Q9HA77 564 aaKnown RBP11.08□□□□□ -0.64
VRK3-210ENST00000596121 ARFGAP3Q9NP61 516 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 PKD2L2Q9NZM6 624 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 IL17CQ9P0M4 197 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 MOSPD1Q9UJG1 213 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 SUFUQ9UMX1 484 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 ZNF148Q9UQR1 794 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 APOBEC2Q9Y235 224 aaKnown RBP11.08□□□□□ -0.64
VRK3-210ENST00000596121 JRKLQ9Y4A0 524 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 FRYQ5TBA9 3013 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 ACACBO00763 2458 aa11.08□□□□□ -0.64
VRK3-210ENST00000596121 KNTC1P50748 2209 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 NEMP2A6NFY4 417 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 PDE2AO00408 941 aaPredicted RBP11.07□□□□□ -0.64
VRK3-210ENST00000596121 TPP1O14773 563 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 FANCGO15287 622 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 GPR39O43194 453 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 ZSCAN12O43309 604 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 DNAJC6O75061 913 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 FGF1P05230 155 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 IVLP07476 585 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 ANXA6P08133 673 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 CKMT1AP12532 417 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 CTSEP14091 401 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 TPH1P17752 444 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 ACP1P24666 158 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 HMGCLP35914 325 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 GNPDA1P46926 289 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 KCNJ1P48048 391 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 BLKP51451 505 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 DCDC1P59894 354 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 PRPSAP1Q14558 356 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 ARHGEF18Q6ZSZ5 1173 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 MARK2Q7KZI7 788 aaKnown RBP11.07□□□□□ -0.64
VRK3-210ENST00000596121 RASGEF1CQ8N431 466 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 FSTL5Q8N475 847 aaPredicted RBP11.07□□□□□ -0.64
VRK3-210ENST00000596121 PDCD7Q8N8D1 485 aaKnown RBP11.07□□□□□ -0.64
VRK3-210ENST00000596121 ATL2Q8NHH9 583 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 TBL1YQ9BQ87 522 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 FSD1LQ9BXM9 530 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 FRMD8P1Q9BZ68 369 aaPredicted RBP11.07□□□□□ -0.64
VRK3-210ENST00000596121 ETNK1Q9HBU6 452 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 ARNT2Q9HBZ2 717 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 IL26Q9NPH9 171 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 SPATS2LQ9NUQ6 558 aaKnown RBP11.07□□□□□ -0.64
VRK3-210ENST00000596121 PIH1D1Q9NWS0 290 aaKnown RBP11.07□□□□□ -0.64
VRK3-210ENST00000596121 NFKBIL1Q9UBC1 381 aaPredicted RBP11.07□□□□□ -0.64
VRK3-210ENST00000596121 AAR2Q9Y312 384 aaKnown RBP11.07□□□□□ -0.64
VRK3-210ENST00000596121 PRKAB1Q9Y478 270 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 ARL5AQ9Y689 179 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 ASPMQ8IZT6 3477 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 SCN8AQ9UQD0 1980 aa11.07□□□□□ -0.64
VRK3-210ENST00000596121 PLXNB3Q9ULL4 1909 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 FAM149AA5PLN7 773 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 FAM221BA6H8Z2 402 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 UGT1A9O60656 530 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 RFPL3O75679 317 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 IFNB1P01574 187 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 UGT1A6P19224 532 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 UGT1A1P22309 533 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 UGT1A4P22310 534 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 KELP23276 732 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 AK4P27144 223 aaPredicted RBP11.06□□□□□ -0.64
VRK3-210ENST00000596121 STIP1P31948 543 aaKnown RBP11.06□□□□□ -0.64
VRK3-210ENST00000596121 RPL22P35268 128 aaKnown RBP11.06□□□□□ -0.64
VRK3-210ENST00000596121 UGT1A3P35503 534 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms