RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 PSMB4P28070 264 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 ADRA1AP35348 466 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 CETN2P41208 172 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 GDF10P55107 478 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 MPP3Q13368 585 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 ILKQ13418 452 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 OLIG2Q13516 323 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 CAMK2BQ13554 666 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 ELOCQ15369 112 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 SLC1A5Q15758 541 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 GUSBP11Q6P575 273 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 NRROSQ86YC3 692 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 KLHDC8BQ8IXV7 354 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 TTC30BQ8N4P2 665 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 IPMKQ8NFU5 416 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 ATL2Q8NHH9 583 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 CCDC110Q8TBZ0 833 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 ATG4AQ8WYN0 398 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 SCARF2Q96GP6 870 aaPredicted RBP10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 SPATA13Q96N96 652 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 FAM83DQ9H4H8 585 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 NFKBIL1Q9UBC1 381 aaPredicted RBP10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 SUFUQ9UMX1 484 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 TMEM98Q9Y2Y6 226 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 PCYT1BQ9Y5K3 369 aaPredicted RBP10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 OAS3Q9Y6K5 1087 aaKnown RBP10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 ZFYVE26Q68DK2 2539 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 EME2A4GXA9 379 aaPredicted RBP10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 RGSL1A5PLK6 1076 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 PDE2AO00408 941 aaPredicted RBP10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 INPP4BO15327 924 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 AGTP01019 485 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 SLC4A1P02730 911 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 CAPNS1P04632 268 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 ATP1A1P05023 1023 aaKnown RBP10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 IVLP07476 585 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 CTSEP14091 401 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 BPIP17213 487 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 DCDC1P59894 354 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 INSM1Q01101 510 aaPredicted RBP10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 HS1BP3Q53T59 392 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 PERM1Q5SV97 790 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 HES3Q5TGS1 186 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 ITPRIPL1Q6GPH6 555 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 DOK6Q6PKX4 331 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 LVRNQ6Q4G3 990 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 UNQ6494/PRO21346Q6UXR6 183 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 SLC13A5Q86YT5 568 aaPredicted RBP10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 GALNT15Q8N3T1 639 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 SDR16C5Q8N3Y7 309 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 SLC25A41Q8N5S1 370 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 KYQ8NBH2 561 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 TTC13Q8NBP0 860 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 CCHCR1Q8TD31 782 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 GPBAR1Q8TDU6 330 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 HIC2Q96JB3 615 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 TLR10Q9BXR5 811 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 KCNF1Q9H3M0 494 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 SUDS3Q9H7L9 328 aaPredicted RBP10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 CARS2Q9HA77 564 aaKnown RBP10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 PKD2L2Q9NZM6 624 aa10.92□□□□□ -0.66
SHKBP1-206ENST00000595523 CPED1A4D0V7 1026 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 GOLGA6L9A6NEM1 432 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 C5orf60A6NFR6 353 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 NOBOXO60393 691 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 ANXA9O76027 345 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 METTL18O95568 372 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 FGF1P05230 155 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 PYGLP06737 847 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 GP1BAP07359 652 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 CDK4P11802 303 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 HLA-DPA1P20036 260 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 AK4P27144 223 aaPredicted RBP10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 HMGCLP35914 325 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 GNPDA1P46926 289 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 GEMP55040 296 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 MSLNQ13421 630 aaPredicted RBP10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 RPS6KA1Q15418 735 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 NR0B2Q15466 257 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 SIX1Q15475 284 aaPredicted RBP10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 OASLQ15646 514 aaKnown RBP10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 SEL1L2Q5TEA6 688 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 CDCP2Q5VXM1 449 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 ALS2CLQ60I27 953 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 KCTD11Q693B1 232 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 OGFOD3Q6PK18 319 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 RANBP10Q6VN20 620 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 TMPRSS12Q86WS5 348 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 GKN2Q86XP6 184 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 ARL10Q8N8L6 244 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 FAM71DQ8N9W8 422 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 GPR156Q8NFN8 814 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 IFI44Q8TCB0 444 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 APOL2Q9BQE5 337 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 TMEM121Q9BTD3 319 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 FICDQ9BVA6 458 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 FSD1LQ9BXM9 530 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 GPR63Q9BZJ6 419 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 CARD9Q9H257 536 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 BPIFA1Q9NP55 256 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms