RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 TTLL3Q9Y4R7 772 aa22.53■■□□□ 1.2
SSBP4-203ENST00000593641 PPFIA2O75334 1257 aa22.52■■□□□ 1.2
SSBP4-203ENST00000593641 ASMTLO95671 621 aa22.52■■□□□ 1.2
SSBP4-203ENST00000593641 CA4P22748 312 aa22.52■■□□□ 1.2
SSBP4-203ENST00000593641 MPSTP25325 297 aa22.52■■□□□ 1.2
SSBP4-203ENST00000593641 GARSP41250 739 aaKnown RBP22.52■■□□□ 1.2
SSBP4-203ENST00000593641 FASLGP48023 281 aa22.52■■□□□ 1.2
SSBP4-203ENST00000593641 CSRP3P50461 194 aa22.52■■□□□ 1.2
SSBP4-203ENST00000593641 PTSQ03393 145 aa22.52■■□□□ 1.2
SSBP4-203ENST00000593641 SQSTM1Q13501 440 aa22.52■■□□□ 1.2
SSBP4-203ENST00000593641 PYCR3Q53H96 274 aa22.52■■□□□ 1.2
SSBP4-203ENST00000593641 TIGD7Q6NT04 549 aaPredicted RBP22.52■■□□□ 1.2
SSBP4-203ENST00000593641 ATG14Q6ZNE5 492 aa22.52■■□□□ 1.2
SSBP4-203ENST00000593641 NLRP8Q86W28 1048 aa22.52■■□□□ 1.2
SSBP4-203ENST00000593641 FAM129CQ86XR2 697 aa22.52■■□□□ 1.2
SSBP4-203ENST00000593641 EXD1Q8NHP7 514 aa22.52■■□□□ 1.2
SSBP4-203ENST00000593641 HTR3CQ8WXA8 447 aa22.52■■□□□ 1.2
SSBP4-203ENST00000593641 PMEPA1Q969W9 287 aa22.52■■□□□ 1.2
SSBP4-203ENST00000593641 COL26A1Q96A83 441 aa22.52■■□□□ 1.2
SSBP4-203ENST00000593641 ASPSCR1Q9BZE9 553 aa22.52■■□□□ 1.2
SSBP4-203ENST00000593641 TRIM4Q9C037 500 aa22.52■■□□□ 1.2
SSBP4-203ENST00000593641 BZW2Q9Y6E2 419 aaKnown RBP22.52■■□□□ 1.2
SSBP4-203ENST00000593641 HECTD1Q9ULT8 2610 aa22.51■■□□□ 1.19
SSBP4-203ENST00000593641 DUX1O43812 170 aa22.51■■□□□ 1.19
SSBP4-203ENST00000593641 MFSD11O43934 449 aa22.51■■□□□ 1.19
SSBP4-203ENST00000593641 SERPINC1P01008 464 aa22.51■■□□□ 1.19
SSBP4-203ENST00000593641 ITGB6P18564 788 aa22.51■■□□□ 1.19
SSBP4-203ENST00000593641 CES1P23141 567 aa22.51■■□□□ 1.19
SSBP4-203ENST00000593641 ZNF165P49910 485 aa22.51■■□□□ 1.19
SSBP4-203ENST00000593641 RAB15P59190 212 aa22.51■■□□□ 1.19
SSBP4-203ENST00000593641 HADHQ16836 314 aaKnown RBP22.51■■□□□ 1.19
SSBP4-203ENST00000593641 FIGNQ5HY92 759 aa22.51■■□□□ 1.19
SSBP4-203ENST00000593641 TMEM71Q6P5X7 295 aa22.51■■□□□ 1.19
SSBP4-203ENST00000593641 NRSN1Q8IZ57 195 aa22.51■■□□□ 1.19
SSBP4-203ENST00000593641 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.51■■□□□ 1.19
SSBP4-203ENST00000593641 OR10G6Q8NH81 332 aa22.51■■□□□ 1.19
SSBP4-203ENST00000593641 SLC37A2Q8TED4 501 aa22.51■■□□□ 1.19
SSBP4-203ENST00000593641 NKD1Q969G9 470 aa22.51■■□□□ 1.19
SSBP4-203ENST00000593641 NAP1L5Q96NT1 182 aaPredicted RBP22.51■■□□□ 1.19
SSBP4-203ENST00000593641 NUP85Q9BW27 656 aa22.51■■□□□ 1.19
SSBP4-203ENST00000593641 STN1Q9H668 368 aaKnown RBP22.51■■□□□ 1.19
SSBP4-203ENST00000593641 SLC39A1Q9NY26 324 aa22.51■■□□□ 1.19
SSBP4-203ENST00000593641 TMEM63CQ9P1W3 806 aa22.51■■□□□ 1.19
SSBP4-203ENST00000593641 B3GALT1Q9Y5Z6 326 aa22.51■■□□□ 1.19
SSBP4-203ENST00000593641 MYO1FO00160 1098 aa22.5■■□□□ 1.19
SSBP4-203ENST00000593641 INPP4BO15327 924 aa22.5■■□□□ 1.19
SSBP4-203ENST00000593641 UGT1A3P35503 534 aa22.5■■□□□ 1.19
SSBP4-203ENST00000593641 ARSDP51689 593 aa22.5■■□□□ 1.19
SSBP4-203ENST00000593641 STC1P52823 247 aa22.5■■□□□ 1.19
SSBP4-203ENST00000593641 NFKB2Q00653 900 aa22.5■■□□□ 1.19
SSBP4-203ENST00000593641 DSC2Q02487 901 aa22.5■■□□□ 1.19
SSBP4-203ENST00000593641 GALNT2Q10471 571 aa22.5■■□□□ 1.19
SSBP4-203ENST00000593641 MMRN1Q13201 1228 aa22.5■■□□□ 1.19
SSBP4-203ENST00000593641 DCAF12Q5T6F0 453 aa22.5■■□□□ 1.19
SSBP4-203ENST00000593641 ZNF761Q86XN6 746 aaPredicted RBP22.5■■□□□ 1.19
SSBP4-203ENST00000593641 SFRP1Q8N474 314 aa22.5■■□□□ 1.19
SSBP4-203ENST00000593641 SMIM14Q96QK8 99 aa22.5■■□□□ 1.19
SSBP4-203ENST00000593641 RIOK2Q9BVS4 552 aaKnown RBP22.5■■□□□ 1.19
SSBP4-203ENST00000593641 TDRD1Q9BXT4 1180 aaKnown RBP22.5■■□□□ 1.19
SSBP4-203ENST00000593641 TMEM9Q9P0T7 183 aa22.5■■□□□ 1.19
SSBP4-203ENST00000593641 AMACRQ9UHK6 382 aa22.5■■□□□ 1.19
SSBP4-203ENST00000593641 MAST4O15021 2626 aa22.49■■□□□ 1.19
SSBP4-203ENST00000593641 NAV2Q8IVL1 2488 aa22.49■■□□□ 1.19
SSBP4-203ENST00000593641 TRBV23OR9-2A0A075B6M9 112 aa22.49■■□□□ 1.19
SSBP4-203ENST00000593641 EFCAB7A8K855 629 aa22.49■■□□□ 1.19
SSBP4-203ENST00000593641 CD48P09326 243 aa22.49■■□□□ 1.19
SSBP4-203ENST00000593641 IL4RP24394 825 aa22.49■■□□□ 1.19
SSBP4-203ENST00000593641 IFI16Q16666 785 aaKnown RBP22.49■■□□□ 1.19
SSBP4-203ENST00000593641 NCBP2-AS2Q69YL0 99 aa22.49■■□□□ 1.19
SSBP4-203ENST00000593641 ALG1LQ6GMV1 187 aa22.49■■□□□ 1.19
SSBP4-203ENST00000593641 RAVER1Q8IY67 606 aaKnown RBP22.49■■□□□ 1.19
SSBP4-203ENST00000593641 CACNA2D3Q8IZS8 1091 aa22.49■■□□□ 1.19
SSBP4-203ENST00000593641 MAML1Q92585 1016 aa22.49■■□□□ 1.19
SSBP4-203ENST00000593641 COX14Q96I36 57 aa22.49■■□□□ 1.19
SSBP4-203ENST00000593641 AGAP2Q99490 1192 aa22.49■■□□□ 1.19
SSBP4-203ENST00000593641 FUCA2Q9BTY2 467 aa22.49■■□□□ 1.19
SSBP4-203ENST00000593641 RBM22Q9NW64 420 aaKnown RBP eCLIP22.49■■□□□ 1.19
SSBP4-203ENST00000593641 GEMIN8Q9NWZ8 242 aaKnown RBP22.49■■□□□ 1.19
SSBP4-203ENST00000593641 VPS18Q9P253 973 aa22.49■■□□□ 1.19
SSBP4-203ENST00000593641 IL17BQ9UHF5 180 aa22.49■■□□□ 1.19
SSBP4-203ENST00000593641 ZNHIT2Q9UHR6 403 aa22.49■■□□□ 1.19
SSBP4-203ENST00000593641 CHKBQ9Y259 395 aa22.49■■□□□ 1.19
SSBP4-203ENST00000593641 PTPN13Q12923 2485 aa22.48■■□□□ 1.19
SSBP4-203ENST00000593641 B4E171 279 aa22.48■■□□□ 1.19
SSBP4-203ENST00000593641 MATN3O15232 486 aa22.48■■□□□ 1.19
SSBP4-203ENST00000593641 MAP3K6O95382 1288 aa22.48■■□□□ 1.19
SSBP4-203ENST00000593641 GJC1P36383 396 aa22.48■■□□□ 1.19
SSBP4-203ENST00000593641 TSPAN7P41732 249 aa22.48■■□□□ 1.19
SSBP4-203ENST00000593641 HHEXQ03014 270 aa22.48■■□□□ 1.19
SSBP4-203ENST00000593641 NR1I3Q14994 352 aa22.48■■□□□ 1.19
SSBP4-203ENST00000593641 PAFAH1B3Q15102 231 aaKnown RBP22.48■■□□□ 1.19
SSBP4-203ENST00000593641 HGSNATQ68CP4 663 aa22.48■■□□□ 1.19
SSBP4-203ENST00000593641 BORAQ6PGQ7 559 aa22.48■■□□□ 1.19
SSBP4-203ENST00000593641 LPCAT1Q8NF37 534 aa22.48■■□□□ 1.19
SSBP4-203ENST00000593641 FAM71BQ8TC56 605 aa22.48■■□□□ 1.19
SSBP4-203ENST00000593641 SLC12A9Q9BXP2 914 aa22.48■■□□□ 1.19
SSBP4-203ENST00000593641 SLC25A18Q9H1K4 315 aa22.48■■□□□ 1.19
SSBP4-203ENST00000593641 OCIAD1Q9NX40 245 aa22.48■■□□□ 1.19
SSBP4-203ENST00000593641 TERTO14746 1132 aaKnown RBP22.47■■□□□ 1.19
SSBP4-203ENST00000593641 SUV39H1O43463 412 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms