RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 MFSD11O43934 449 aa16.25■□□□□ 0.19
LIG1-205ENST00000593425 RAD1O60671 282 aa16.25■□□□□ 0.19
LIG1-205ENST00000593425 TRBC1P01850 177 aa16.25■□□□□ 0.19
LIG1-205ENST00000593425 MYBL1P10243 752 aa16.25■□□□□ 0.19
LIG1-205ENST00000593425 GPLD1P80108 840 aa16.25■□□□□ 0.19
LIG1-205ENST00000593425 TYRO3Q06418 890 aa16.25■□□□□ 0.19
LIG1-205ENST00000593425 MMRN1Q13201 1228 aa16.25■□□□□ 0.19
LIG1-205ENST00000593425 ANKS6Q68DC2 871 aa16.25■□□□□ 0.19
LIG1-205ENST00000593425 ZNF765Q7L2R6 523 aa16.25■□□□□ 0.19
LIG1-205ENST00000593425 GALNT13Q8IUC8 556 aa16.25■□□□□ 0.19
LIG1-205ENST00000593425 CACNA2D3Q8IZS8 1091 aa16.25■□□□□ 0.19
LIG1-205ENST00000593425 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.25■□□□□ 0.19
LIG1-205ENST00000593425 BMPERQ8N8U9 685 aa16.25■□□□□ 0.19
LIG1-205ENST00000593425 CCDC112Q8NEF3 446 aa16.25■□□□□ 0.19
LIG1-205ENST00000593425 TEKT4Q8WW24 435 aa16.25■□□□□ 0.19
LIG1-205ENST00000593425 DPYSL5Q9BPU6 564 aa16.25■□□□□ 0.19
LIG1-205ENST00000593425 PRKAB1Q9Y478 270 aa16.25■□□□□ 0.19
LIG1-205ENST00000593425 B4E171 279 aa16.24■□□□□ 0.19
LIG1-205ENST00000593425 MAP3K6O95382 1288 aa16.24■□□□□ 0.19
LIG1-205ENST00000593425 CD48P09326 243 aa16.24■□□□□ 0.19
LIG1-205ENST00000593425 ZNF30P17039 623 aa16.24■□□□□ 0.19
LIG1-205ENST00000593425 IL4RP24394 825 aa16.24■□□□□ 0.19
LIG1-205ENST00000593425 TSPAN7P41732 249 aa16.24■□□□□ 0.19
LIG1-205ENST00000593425 STC1P52823 247 aa16.24■□□□□ 0.19
LIG1-205ENST00000593425 POLE2P56282 527 aa16.24■□□□□ 0.19
LIG1-205ENST00000593425 DSC2Q02487 901 aa16.24■□□□□ 0.19
LIG1-205ENST00000593425 ITKQ08881 620 aa16.24■□□□□ 0.19
LIG1-205ENST00000593425 ANO6Q4KMQ2 910 aa16.24■□□□□ 0.19
LIG1-205ENST00000593425 SNAP47Q5SQN1 464 aa16.24■□□□□ 0.19
LIG1-205ENST00000593425 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.24■□□□□ 0.19
LIG1-205ENST00000593425 BORAQ6PGQ7 559 aa16.24■□□□□ 0.19
LIG1-205ENST00000593425 SFRP1Q8N474 314 aa16.24■□□□□ 0.19
LIG1-205ENST00000593425 SLC38A3Q99624 504 aa16.24■□□□□ 0.19
LIG1-205ENST00000593425 RIOK2Q9BVS4 552 aaKnown RBP16.24■□□□□ 0.19
LIG1-205ENST00000593425 TDRD1Q9BXT4 1180 aaKnown RBP16.24■□□□□ 0.19
LIG1-205ENST00000593425 POLR1EQ9GZS1 481 aaKnown RBP16.24■□□□□ 0.19
LIG1-205ENST00000593425 ADNPQ9H2P0 1102 aa16.24■□□□□ 0.19
LIG1-205ENST00000593425 PDP2Q9P2J9 529 aa16.24■□□□□ 0.19
LIG1-205ENST00000593425 CHKBQ9Y259 395 aa16.24■□□□□ 0.19
LIG1-205ENST00000593425 OAS3Q9Y6K5 1087 aaKnown RBP16.24■□□□□ 0.19
LIG1-205ENST00000593425 A8MU76 341 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 DUX1O43812 170 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 DNAJC6O75061 913 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 ASMTLO95671 621 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 ATP1A1P05023 1023 aaKnown RBP16.23■□□□□ 0.19
LIG1-205ENST00000593425 GARSP41250 739 aaKnown RBP16.23■□□□□ 0.19
LIG1-205ENST00000593425 PPM1FP49593 454 aaPredicted RBP16.23■□□□□ 0.19
LIG1-205ENST00000593425 TLE1Q04724 770 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 LRP8Q14114 963 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 PIGHQ14442 188 aaPredicted RBP16.23■□□□□ 0.19
LIG1-205ENST00000593425 KRT81Q14533 505 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 CCDC183Q5T5S1 534 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 DCAF12Q5T6F0 453 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 ALG1LQ6GMV1 187 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 NLRP8Q86W28 1048 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 PTRH1Q86Y79 214 aaKnown RBP16.23■□□□□ 0.19
LIG1-205ENST00000593425 NRSN1Q8IZ57 195 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 NDUFAF2Q8N183 169 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 NIPA2Q8N8Q9 360 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 OR10G6Q8NH81 332 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 EXD1Q8NHP7 514 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 MAML1Q92585 1016 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 RTP4Q96DX8 246 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 AHCYL2Q96HN2 611 aaKnown RBP16.23■□□□□ 0.19
LIG1-205ENST00000593425 NAP1L5Q96NT1 182 aaPredicted RBP16.23■□□□□ 0.19
LIG1-205ENST00000593425 WDR24Q96S15 920 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 CTRCQ99895 268 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 ASPSCR1Q9BZE9 553 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 THAP2Q9H0W7 228 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 PILRAQ9UKJ1 303 aa16.23■□□□□ 0.19
LIG1-205ENST00000593425 CLDN7O95471 211 aa16.22■□□□□ 0.19
LIG1-205ENST00000593425 PRLP01236 227 aa16.22■□□□□ 0.19
LIG1-205ENST00000593425 PYGLP06737 847 aa16.22■□□□□ 0.19
LIG1-205ENST00000593425 EPHB1P54762 984 aa16.22■□□□□ 0.19
LIG1-205ENST00000593425 RAB15P59190 212 aa16.22■□□□□ 0.19
LIG1-205ENST00000593425 HHEXQ03014 270 aa16.22■□□□□ 0.19
LIG1-205ENST00000593425 GALNT2Q10471 571 aa16.22■□□□□ 0.19
LIG1-205ENST00000593425 KCNAB2Q13303 367 aa16.22■□□□□ 0.19
LIG1-205ENST00000593425 HGSNATQ68CP4 663 aa16.22■□□□□ 0.19
LIG1-205ENST00000593425 NCBP2-AS2Q69YL0 99 aa16.22■□□□□ 0.19
LIG1-205ENST00000593425 CHST15Q7LFX5 561 aaPredicted RBP16.22■□□□□ 0.19
LIG1-205ENST00000593425 ARHGAP22Q7Z5H3 698 aa16.22■□□□□ 0.19
LIG1-205ENST00000593425 ARRDC2Q8TBH0 407 aa16.22■□□□□ 0.19
LIG1-205ENST00000593425 ZNF564Q8TBZ8 553 aaPredicted RBP16.22■□□□□ 0.19
LIG1-205ENST00000593425 FAM71BQ8TC56 605 aa16.22■□□□□ 0.19
LIG1-205ENST00000593425 LRRN4Q8WUT4 740 aa16.22■□□□□ 0.19
LIG1-205ENST00000593425 GBP4Q96PP9 640 aa16.22■□□□□ 0.19
LIG1-205ENST00000593425 SPRY4Q9C004 299 aa16.22■□□□□ 0.19
LIG1-205ENST00000593425 APMAPQ9HDC9 416 aa16.22■□□□□ 0.19
LIG1-205ENST00000593425 TBC1D29Q9UFV1 150 aa16.22■□□□□ 0.19
LIG1-205ENST00000593425 ZNHIT2Q9UHR6 403 aa16.22■□□□□ 0.19
LIG1-205ENST00000593425 ANAPC7Q9UJX3 599 aa16.22■□□□□ 0.19
LIG1-205ENST00000593425 CNOT6Q9ULM6 557 aaKnown RBP16.22■□□□□ 0.19
LIG1-205ENST00000593425 KCNK6Q9Y257 313 aa16.22■□□□□ 0.19
LIG1-205ENST00000593425 TTLL3Q9Y4R7 772 aa16.22■□□□□ 0.19
LIG1-205ENST00000593425 ZNF106Q9H2Y7 1883 aaKnown RBP16.21■□□□□ 0.19
LIG1-205ENST00000593425 A0A1B0GTH6 734 aa16.21■□□□□ 0.19
LIG1-205ENST00000593425 LOC101059948A0A1B0GTJ6 334 aa16.21■□□□□ 0.19
LIG1-205ENST00000593425 ZNF891A8MT65 544 aaPredicted RBP16.21■□□□□ 0.19
LIG1-205ENST00000593425 FADS2P1A8MWK0 482 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms