RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 CLTBP09497 229 aa19.62■□□□□ 0.73
MBD3-209ENST00000592012 GAREM2Q75VX8 874 aa19.62■□□□□ 0.73
MBD3-209ENST00000592012 CLYBLQ8N0X4 340 aa19.62■□□□□ 0.73
MBD3-209ENST00000592012 DCAF4L2Q8NA75 395 aa19.62■□□□□ 0.73
MBD3-209ENST00000592012 HMGCLL1Q8TB92 370 aa19.62■□□□□ 0.73
MBD3-209ENST00000592012 ASB2Q96Q27 587 aa19.62■□□□□ 0.73
MBD3-209ENST00000592012 CDRT15Q96T59 188 aa19.62■□□□□ 0.73
MBD3-209ENST00000592012 HACD3Q9P035 362 aa19.62■□□□□ 0.73
MBD3-209ENST00000592012 STK39Q9UEW8 545 aa19.62■□□□□ 0.73
MBD3-209ENST00000592012 K7ERQ8 282 aa19.62■□□□□ 0.73
MBD3-209ENST00000592012 ATP6V0D1P61421 351 aa19.62■□□□□ 0.73
MBD3-209ENST00000592012 WDR5P61964 334 aaKnown RBP19.62■□□□□ 0.73
MBD3-209ENST00000592012 RAD51Q06609 339 aa19.62■□□□□ 0.73
MBD3-209ENST00000592012 RNF111Q6ZNA4 994 aa19.62■□□□□ 0.73
MBD3-209ENST00000592012 LARP4Q71RC2 724 aaKnown RBP eCLIP19.62■□□□□ 0.73
MBD3-209ENST00000592012 RAB44Q7Z6P3 723 aaPredicted RBP19.62■□□□□ 0.73
MBD3-209ENST00000592012 APCDD1Q8J025 514 aa19.62■□□□□ 0.73
MBD3-209ENST00000592012 PGAM4Q8N0Y7 254 aa19.62■□□□□ 0.73
MBD3-209ENST00000592012 TTC16Q8NEE8 873 aa19.62■□□□□ 0.73
MBD3-209ENST00000592012 EID2BQ96D98 161 aa19.62■□□□□ 0.73
MBD3-209ENST00000592012 SLC30A3Q99726 388 aa19.62■□□□□ 0.73
MBD3-209ENST00000592012 MRGBPQ9NV56 204 aa19.62■□□□□ 0.73
MBD3-209ENST00000592012 PACSIN3Q9UKS6 424 aa19.62■□□□□ 0.73
MBD3-209ENST00000592012 LAMA3Q16787 3333 aa19.62■□□□□ 0.73
MBD3-209ENST00000592012 ANKRD12Q6UB98 2062 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 MAP3K7O43318 606 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 PKMP14618 531 aaKnown RBP19.61■□□□□ 0.73
MBD3-209ENST00000592012 CSF2RAP15509 400 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 GABRR2P28476 465 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 ZRANB3Q5FWF4 1079 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 PIGGQ5H8A4 983 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 CTSL3PQ5NE16 218 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 KBTBD2Q8IY47 623 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 SERPINI1Q99574 410 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.61■□□□□ 0.73
MBD3-209ENST00000592012 IL17CQ9P0M4 197 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 FNDC3AQ9Y2H6 1198 aaKnown RBP19.61■□□□□ 0.73
MBD3-209ENST00000592012 PYGLP06737 847 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 GFAPP14136 432 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 CD9P21926 228 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 CLCN4P51793 760 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 XIAPP98170 497 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 CYP4F8P98187 520 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 ART3Q13508 389 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 KBTBD6Q86V97 674 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 MFN1Q8IWA4 741 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 HIPK4Q8NE63 616 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 C3orf30Q96M34 536 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 NSUN5Q96P11 429 aaKnown RBP19.61■□□□□ 0.73
MBD3-209ENST00000592012 WDR41Q9HAD4 459 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 RNF112Q9ULX5 631 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 DNAJC15Q9Y5T4 150 aa19.61■□□□□ 0.73
MBD3-209ENST00000592012 DENND4CQ5VZ89 1909 aa19.6■□□□□ 0.73
MBD3-209ENST00000592012 PFDN6O15212 129 aa19.6■□□□□ 0.73
MBD3-209ENST00000592012 TGM5O43548 720 aa19.6■□□□□ 0.73
MBD3-209ENST00000592012 NIPSNAP2O75323 286 aa19.6■□□□□ 0.73
MBD3-209ENST00000592012 HMGCLP35914 325 aa19.6■□□□□ 0.73
MBD3-209ENST00000592012 DPP6P42658 865 aa19.6■□□□□ 0.73
MBD3-209ENST00000592012 PTK2BQ14289 1009 aa19.6■□□□□ 0.73
MBD3-209ENST00000592012 SQLEQ14534 574 aa19.6■□□□□ 0.73
MBD3-209ENST00000592012 TSNQ15631 228 aaKnown RBP19.6■□□□□ 0.73
MBD3-209ENST00000592012 ZNF423Q2M1K9 1284 aa19.6■□□□□ 0.73
MBD3-209ENST00000592012 BNC2Q6ZN30 1099 aaPredicted RBP19.6■□□□□ 0.73
MBD3-209ENST00000592012 GK5Q6ZS86 529 aa19.6■□□□□ 0.73
MBD3-209ENST00000592012 NKAPQ8N5F7 415 aaKnown RBP19.6■□□□□ 0.73
MBD3-209ENST00000592012 DDI1Q8WTU0 396 aa19.6■□□□□ 0.73
MBD3-209ENST00000592012 FUBP1Q96AE4 644 aaKnown RBP19.6■□□□□ 0.73
MBD3-209ENST00000592012 C19orf60Q96EN9 201 aa19.6■□□□□ 0.73
MBD3-209ENST00000592012 NPAS2Q99743 824 aa19.6■□□□□ 0.73
MBD3-209ENST00000592012 TM6SF2Q9BZW4 377 aa19.6■□□□□ 0.73
MBD3-209ENST00000592012 MAGEE1Q9HCI5 957 aa19.6■□□□□ 0.73
MBD3-209ENST00000592012 BATF3Q9NR55 127 aa19.6■□□□□ 0.73
MBD3-209ENST00000592012 ASB3Q9Y575 518 aa19.6■□□□□ 0.73
MBD3-209ENST00000592012 ATP6AP2A0A1C7CYW4 349 aa19.59■□□□□ 0.73
MBD3-209ENST00000592012 CDC7O00311 574 aa19.59■□□□□ 0.73
MBD3-209ENST00000592012 SMAD6O43541 496 aaKnown RBP19.59■□□□□ 0.73
MBD3-209ENST00000592012 CLASP2O75122 1294 aaKnown RBP19.59■□□□□ 0.73
MBD3-209ENST00000592012 GPC4O75487 556 aa19.59■□□□□ 0.73
MBD3-209ENST00000592012 ATP6AP2O75787 350 aa19.59■□□□□ 0.73
MBD3-209ENST00000592012 TSPAN12O95859 305 aa19.59■□□□□ 0.73
MBD3-209ENST00000592012 CNPP09543 421 aaKnown RBP19.59■□□□□ 0.73
MBD3-209ENST00000592012 ENO3P13929 434 aaPredicted RBP19.59■□□□□ 0.73
MBD3-209ENST00000592012 ADARP55265 1226 aaKnown RBP19.59■□□□□ 0.73
MBD3-209ENST00000592012 CAMK1DQ8IU85 385 aa19.59■□□□□ 0.73
MBD3-209ENST00000592012 GPR65Q8IYL9 337 aa19.59■□□□□ 0.73
MBD3-209ENST00000592012 PIH1D2Q8WWB5 315 aa19.59■□□□□ 0.73
MBD3-209ENST00000592012 ZNF184Q99676 751 aaPredicted RBP19.59■□□□□ 0.73
MBD3-209ENST00000592012 C2orf49Q9BVC5 232 aaPredicted RBP19.59■□□□□ 0.73
MBD3-209ENST00000592012 MID1IP1Q9NPA3 183 aa19.59■□□□□ 0.73
MBD3-209ENST00000592012 PCDH10Q9P2E7 1040 aa19.59■□□□□ 0.73
MBD3-209ENST00000592012 ZNF711Q9Y462 761 aa19.59■□□□□ 0.73
MBD3-209ENST00000592012 PSMD12O00232 456 aaPredicted RBP19.59■□□□□ 0.73
MBD3-209ENST00000592012 CFLARO15519 480 aa19.59■□□□□ 0.73
MBD3-209ENST00000592012 VPS26AO75436 327 aa19.59■□□□□ 0.73
MBD3-209ENST00000592012 ECI2O75521 394 aa19.59■□□□□ 0.73
MBD3-209ENST00000592012 PGLSO95336 258 aa19.59■□□□□ 0.73
MBD3-209ENST00000592012 THOP1P52888 689 aa19.59■□□□□ 0.73
MBD3-209ENST00000592012 AP1S1P61966 158 aa19.59■□□□□ 0.73
MBD3-209ENST00000592012 ANO7Q6IWH7 933 aa19.59■□□□□ 0.73
MBD3-209ENST00000592012 HTR3DQ70Z44 454 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms