RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 PPFIA2O75334 1257 aa16.73■□□□□ 0.27
LSM14A-208ENST00000590416 ASMTLO95671 621 aa16.73■□□□□ 0.27
LSM14A-208ENST00000590416 TRIM23P36406 574 aa16.73■□□□□ 0.27
LSM14A-208ENST00000590416 CDK16Q00536 496 aa16.73■□□□□ 0.27
LSM14A-208ENST00000590416 PPARDQ03181 441 aa16.73■□□□□ 0.27
LSM14A-208ENST00000590416 LAMB3Q13751 1172 aa16.73■□□□□ 0.27
LSM14A-208ENST00000590416 KCNJ11Q14654 390 aa16.73■□□□□ 0.27
LSM14A-208ENST00000590416 ANKRD22Q5VYY1 191 aa16.73■□□□□ 0.27
LSM14A-208ENST00000590416 IZUMO3Q5VZ72 239 aa16.73■□□□□ 0.27
LSM14A-208ENST00000590416 TRIM74Q86UV6 250 aa16.73■□□□□ 0.27
LSM14A-208ENST00000590416 NLRP8Q86W28 1048 aa16.73■□□□□ 0.27
LSM14A-208ENST00000590416 HID1Q8IV36 788 aa16.73■□□□□ 0.27
LSM14A-208ENST00000590416 PPHLN1Q8NEY8 458 aaKnown RBP16.73■□□□□ 0.27
LSM14A-208ENST00000590416 GDAP1Q8TB36 358 aa16.73■□□□□ 0.27
LSM14A-208ENST00000590416 CPT1BQ92523 772 aa16.73■□□□□ 0.27
LSM14A-208ENST00000590416 HIC2Q96JB3 615 aa16.73■□□□□ 0.27
LSM14A-208ENST00000590416 PLEKHG4BQ96PX9 1271 aa16.73■□□□□ 0.27
LSM14A-208ENST00000590416 LGR4Q9BXB1 951 aa16.73■□□□□ 0.27
LSM14A-208ENST00000590416 GPR27Q9NS67 375 aa16.73■□□□□ 0.27
LSM14A-208ENST00000590416 DNAAF2Q9NVR5 837 aaKnown RBP16.73■□□□□ 0.27
LSM14A-208ENST00000590416 BFARQ9NZS9 450 aa16.73■□□□□ 0.27
LSM14A-208ENST00000590416 FKBPLQ9UIM3 349 aa16.73■□□□□ 0.27
LSM14A-208ENST00000590416 PTPRZ1P23471 2315 aaPredicted RBP16.73■□□□□ 0.27
LSM14A-208ENST00000590416 ZNF106Q9H2Y7 1883 aaKnown RBP16.72■□□□□ 0.27
LSM14A-208ENST00000590416 GLYATL1P3A0A0U1RQE8 302 aa16.72■□□□□ 0.27
LSM14A-208ENST00000590416 HEATR9A2RTY3 570 aa16.72■□□□□ 0.27
LSM14A-208ENST00000590416 FADS2P1A8MWK0 482 aa16.72■□□□□ 0.27
LSM14A-208ENST00000590416 DNALI1O14645 258 aaPredicted RBP16.72■□□□□ 0.27
LSM14A-208ENST00000590416 SCAMP1O15126 338 aa16.72■□□□□ 0.27
LSM14A-208ENST00000590416 SOD1P00441 154 aa16.72■□□□□ 0.27
LSM14A-208ENST00000590416 JUNDP17535 347 aa16.72■□□□□ 0.27
LSM14A-208ENST00000590416 TEAD1P28347 426 aa16.72■□□□□ 0.27
LSM14A-208ENST00000590416 HADHAP40939 763 aa16.72■□□□□ 0.27
LSM14A-208ENST00000590416 HNRNPKP61978 463 aaKnown RBP eCLIP16.72■□□□□ 0.27
LSM14A-208ENST00000590416 MRPS25P82663 173 aaKnown RBP16.72■□□□□ 0.27
LSM14A-208ENST00000590416 EIF2B5Q13144 721 aaKnown RBP16.72■□□□□ 0.27
LSM14A-208ENST00000590416 TUBB2AQ13885 445 aa16.72■□□□□ 0.27
LSM14A-208ENST00000590416 SUZ12Q15022 739 aaKnown RBP16.72■□□□□ 0.27
LSM14A-208ENST00000590416 TCEA2Q15560 299 aa16.72■□□□□ 0.27
LSM14A-208ENST00000590416 LRRC8BQ6P9F7 803 aa16.72■□□□□ 0.27
LSM14A-208ENST00000590416 ADAMTSL4Q6UY14 1074 aa16.72■□□□□ 0.27
LSM14A-208ENST00000590416 MAATS1Q7Z4T9 603 aa16.72■□□□□ 0.27
LSM14A-208ENST00000590416 PCGF5Q86SE9 256 aa16.72■□□□□ 0.27
LSM14A-208ENST00000590416 PPIL6Q8IXY8 311 aa16.72■□□□□ 0.27
LSM14A-208ENST00000590416 PHACTR4Q8IZ21 702 aa16.72■□□□□ 0.27
LSM14A-208ENST00000590416 OR56A4Q8NGH8 313 aa16.72■□□□□ 0.27
LSM14A-208ENST00000590416 TSACCQ96A04 125 aaPredicted RBP16.72■□□□□ 0.27
LSM14A-208ENST00000590416 DNAJC1Q96KC8 554 aaKnown RBP16.72■□□□□ 0.27
LSM14A-208ENST00000590416 TUBB2BQ9BVA1 445 aa16.72■□□□□ 0.27
LSM14A-208ENST00000590416 TEX101Q9BY14 249 aa16.72■□□□□ 0.27
LSM14A-208ENST00000590416 SLC13A1Q9BZW2 595 aa16.72■□□□□ 0.27
LSM14A-208ENST00000590416 NFKBIL1Q9UBC1 381 aaPredicted RBP16.72■□□□□ 0.27
LSM14A-208ENST00000590416 APOBEC3BQ9UH17 382 aaKnown RBP16.72■□□□□ 0.27
LSM14A-208ENST00000590416 MRFAP1Q9Y605 127 aa16.72■□□□□ 0.27
LSM14A-208ENST00000590416 LRP4O75096 1905 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 TMEM202A6NGA9 273 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 EFCAB8A8MWE9 144 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 CCL22O00626 93 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 LDB2O43679 373 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 TMEM63AO94886 807 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 SLC25A14O95258 325 aaPredicted RBP16.71■□□□□ 0.27
LSM14A-208ENST00000590416 RASGRP1O95267 797 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 TNFP01375 233 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 HOXC4P09017 264 aaPredicted RBP16.71■□□□□ 0.27
LSM14A-208ENST00000590416 CTSEP14091 401 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 MGAT1P26572 445 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 EPHA8P29322 1005 aaPredicted RBP16.71■□□□□ 0.27
LSM14A-208ENST00000590416 NPY2RP49146 381 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 BLKP51451 505 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 ZNF140P52738 457 aaPredicted RBP16.71■□□□□ 0.27
LSM14A-208ENST00000590416 SRP54P61011 504 aaKnown RBP16.71■□□□□ 0.27
LSM14A-208ENST00000590416 BNIP3Q12983 259 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 MSLNQ13421 630 aaPredicted RBP16.71■□□□□ 0.27
LSM14A-208ENST00000590416 ITGA9Q13797 1035 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 CHRNA6Q15825 494 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 RSPO4Q2I0M5 234 aaPredicted RBP16.71■□□□□ 0.27
LSM14A-208ENST00000590416 DNTTIP2Q5QJE6 756 aaKnown RBP16.71■□□□□ 0.27
LSM14A-208ENST00000590416 PDPK2PQ6A1A2 396 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 GATAD2AQ86YP4 633 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 PHYKPLQ8IUZ5 450 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 SETD7Q8WTS6 366 aaKnown RBP16.71■□□□□ 0.27
LSM14A-208ENST00000590416 STYXQ8WUJ0 223 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 BTN2A2Q8WVV5 523 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 CYP4F12Q9HCS2 524 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 ARFGAP3Q9NP61 516 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 MRPL40Q9NQ50 206 aaKnown RBP16.71■□□□□ 0.27
LSM14A-208ENST00000590416 APPL1Q9UKG1 709 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 TMEM98Q9Y2Y6 226 aa16.71■□□□□ 0.27
LSM14A-208ENST00000590416 PRSS38A1L453 326 aa16.7■□□□□ 0.26
LSM14A-208ENST00000590416 FAM187AA6NFU0 413 aa16.7■□□□□ 0.26
LSM14A-208ENST00000590416 RAD51CO43502 376 aa16.7■□□□□ 0.26
LSM14A-208ENST00000590416 PRAMEF1O95521 474 aa16.7■□□□□ 0.26
LSM14A-208ENST00000590416 CSF2P04141 144 aa16.7■□□□□ 0.26
LSM14A-208ENST00000590416 ZNF883P0CG24 379 aa16.7■□□□□ 0.26
LSM14A-208ENST00000590416 NME1P15531 152 aaKnown RBP16.7■□□□□ 0.26
LSM14A-208ENST00000590416 ADRA1DP25100 572 aa16.7■□□□□ 0.26
LSM14A-208ENST00000590416 MAGEA6P43360 314 aa16.7■□□□□ 0.26
LSM14A-208ENST00000590416 RXRGP48443 463 aa16.7■□□□□ 0.26
LSM14A-208ENST00000590416 LIMK1P53667 647 aa16.7■□□□□ 0.26
LSM14A-208ENST00000590416 CRADDP78560 199 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms