RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	EML3	Q32P44	896 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	DNAL1	Q4LDG9	190 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	B3GNT6	Q6ZMB0	384 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	GLT6D1	Q7Z4J2	308 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	PTAR1	Q7Z6K3	402 aa	Predicted RBP	15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	GALNT7	Q86SF2	657 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	GPR149	Q86SP6	731 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	CLEC14A	Q86T13	490 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	ZNF554	Q86TJ5	538 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	PLD6	Q8N2A8	252 aa	Known RBP	15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	OR2AP1	Q8NGE2	309 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	PDCD6IP	Q8WUM4	868 aa	Known RBP	15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	OSCP1	Q8WVF1	389 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	PIH1D2	Q8WWB5	315 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	APOL5	Q9BWW9	433 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	SLCO1B3	Q9NPD5	702 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	FBXO6	Q9NRD1	293 aa	Predicted RBP	15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	SLC39A10	Q9ULF5	831 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	PCDHB9	Q9Y5E1	797 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	SCN8A	Q9UQD0	1980 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	TNRC18	O15417	2968 aa	Predicted RBP	15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	COL4A3	Q01955	1670 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	CCDC162P	A2VCL2	907 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	PGLS	O95336	258 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	PIGN	O95427	931 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	CRTAM	O95727	393 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	GOT2	P00505	430 aa	Known RBP	15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	C2	P06681	752 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	HADHA	P40939	763 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	PSMD7	P51665	324 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	PRAME	P78395	509 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	INSC	Q1MX18	579 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	TCEAL5	Q5H9L2	206 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	C16orf46	Q6P387	395 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	C22orf39	Q6P5X5	142 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	SYCE2	Q6PIF2	218 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	CNST	Q6PJW8	725 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	KYAT3	Q6YP21	454 aa	Known RBP	15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	KBTBD2	Q8IY47	623 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	TTC30B	Q8N4P2	665 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	NAT16	Q8N8M0	369 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	ZNF557	Q8N988	423 aa	Predicted RBP	15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	OR6P1	Q8NGX9	317 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	MYLIP	Q8WY64	445 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	ISG20	Q96AZ6	181 aa	Known RBP	15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	SKA1	Q96BD8	255 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	MYO19	Q96H55	970 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	MECR	Q9BV79	373 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	ZNF358	Q9NW07	568 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	DUS2	Q9NX74	493 aa	Known RBP	15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	DCDC2	Q9UHG0	476 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318	SH3GLB1	Q9Y371	365 aa		15.37	■□□□□ 0.05
DDX39A-209	ENST00000589318		A0A096LPK6	155 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318		A0A0U1RQS6	177 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	TMEM221	A6NGB7	291 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	PLIN3	O60664	434 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	S1PR4	O95977	384 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	MPO	P05164	745 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	ARFIP2	P53365	341 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	IRF9	Q00978	393 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	DMC1	Q14565	340 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	TBCC	Q15814	346 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	GEN1	Q17RS7	908 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	SLC41A1	Q8IVJ1	513 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	OR4K2	Q8NGD2	314 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	GPR150	Q8NGU9	434 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	WDR60	Q8WVS4	1066 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	SMARCD2	Q92925	531 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	CDKN2AIPNL	Q96HQ2	116 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	SLC2A11	Q9BYW1	496 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	ARL8B	Q9NVJ2	186 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	TAS2R1	Q9NYW7	299 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	TMEM216	Q9P0N5	145 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	THEG	Q9P2T0	379 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	SLCO3A1	Q9UIG8	710 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	ZNF232	Q9UNY5	417 aa		15.36	■□□□□ 0.05
DDX39A-209	ENST00000589318	XIRP2	A4UGR9	3374 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	FAM95C	A0A1B0GW59	222 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	HNRNPR	O43390	633 aa	Known RBP	15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	SOCS5	O75159	536 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	IGSF6	O95976	241 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	CISD3	P0C7P0	127 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	SLC35E2B	P0CK96	405 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	FCAR	P24071	287 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	MAPK8	P45983	427 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	GRIA4	P48058	902 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	RAB15	P59190	212 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	ACTR3	P61158	418 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	ECT2L	Q008S8	904 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	SEMA3A	Q14563	771 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	RBM20	Q5T481	1227 aa	Known RBP	15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	ARMC12	Q5T9G4	340 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	CES4A	Q5XG92	561 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	LDB1	Q86U70	411 aa	Predicted RBP	15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	C12orf40	Q86WS4	652 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	ZSWIM9	Q86XI8	627 aa		15.35	■□□□□ 0.05

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms