RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 DSG4Q86SJ6 1040 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 CENPLQ8N0S6 344 aaPredicted RBP11.36□□□□□ -0.59
SMAD4-205ENST00000588745 CCDC63Q8NA47 563 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 PIP4K2CQ8TBX8 421 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 ZNF473Q8WTR7 871 aaKnown RBP11.36□□□□□ -0.59
SMAD4-205ENST00000588745 KCTD4Q8WVF5 259 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 DNASE1L2Q92874 299 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 ARRDC3Q96B67 414 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 PPP1R16AQ96I34 528 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 PLEKHG4BQ96PX9 1271 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 ACOX2Q99424 681 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 AARSD1Q9BTE6 412 aaKnown RBP11.36□□□□□ -0.59
SMAD4-205ENST00000588745 FAM107BQ9H098 131 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 CCDC68Q9H2F9 335 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 ASB8Q9H765 288 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 POPDC3Q9HBV1 291 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 FBRSL1Q9HCM7 1045 aaKnown RBP11.36□□□□□ -0.59
SMAD4-205ENST00000588745 ZDHHC4Q9NPG8 344 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 IL26Q9NPH9 171 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 ZNF358Q9NW07 568 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 PKD2L2Q9NZM6 624 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 TMEM216Q9P0N5 145 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 SUN2Q9UH99 717 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 SARDHQ9UL12 918 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 PPM1HQ9ULR3 514 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 VWA7Q9Y334 891 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 C5orf42Q9H799 3197 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 PLXNA2O75051 1894 aa11.36□□□□□ -0.59
SMAD4-205ENST00000588745 ANTXRLA6NF34 631 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 C1QTNF3-AMACRE9PGA6 284 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 BIRC5O15392 142 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 WISP3O95389 354 aaPredicted RBP11.35□□□□□ -0.59
SMAD4-205ENST00000588745 APOA4P06727 396 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 BPGMP07738 259 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 PKMP14618 531 aaKnown RBP11.35□□□□□ -0.59
SMAD4-205ENST00000588745 BGNP21810 368 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 PTGER3P43115 390 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 TNFRSF4P43489 277 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 SPINT3P49223 89 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 SUOXP51687 545 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 ADARP55265 1226 aaKnown RBP11.35□□□□□ -0.59
SMAD4-205ENST00000588745 CDKN2DP55273 166 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 IRX4P78413 519 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 PTSQ03393 145 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 CKAP5Q14008 2032 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 CHRNA6Q15825 494 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 POM121L1PQ3SYA9 428 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 GPR33Q49SQ1 333 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 TXNDC11Q6PKC3 985 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 TAS2R42Q7RTR8 314 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 CPLX4Q7Z7G2 160 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 TBC1D1Q86TI0 1168 aaPredicted RBP11.35□□□□□ -0.59
SMAD4-205ENST00000588745 TTC7BQ86TV6 843 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 SERPINA9Q86WD7 417 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 TRIM42Q8IWZ5 723 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 CHPFQ8IZ52 775 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 PLCD3Q8N3E9 789 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 ZNF513Q8N8E2 541 aaPredicted RBP11.35□□□□□ -0.59
SMAD4-205ENST00000588745 GPR26Q8NDV2 337 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 ZNF75CPQ92670 426 aaPredicted RBP11.35□□□□□ -0.59
SMAD4-205ENST00000588745 EZH1Q92800 747 aaPredicted RBP11.35□□□□□ -0.59
SMAD4-205ENST00000588745 FAM129BQ96TA1 746 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 PHF7Q9BWX1 381 aaPredicted RBP11.35□□□□□ -0.59
SMAD4-205ENST00000588745 GPAMQ9HCL2 828 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 PRSS16Q9NQE7 514 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 FGFR1OP2Q9NVK5 253 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 SIRPGQ9P1W8 387 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 NFKBIL1Q9UBC1 381 aaPredicted RBP11.35□□□□□ -0.59
SMAD4-205ENST00000588745 CRLS1Q9UJA2 301 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 MID2Q9UJV3 735 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 COMMD10Q9Y6G5 202 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 STON1Q9Y6Q2 735 aa11.35□□□□□ -0.59
SMAD4-205ENST00000588745 AGAP14A8MT82 685 aa11.34□□□□□ -0.59
SMAD4-205ENST00000588745 K7EQS6 105 aa11.34□□□□□ -0.59
SMAD4-205ENST00000588745 PSMD11O00231 422 aa11.34□□□□□ -0.59
SMAD4-205ENST00000588745 KLF11O14901 512 aa11.34□□□□□ -0.59
SMAD4-205ENST00000588745 SPINT1O43278 529 aa11.34□□□□□ -0.59
SMAD4-205ENST00000588745 OR1I1O60431 355 aa11.34□□□□□ -0.59
SMAD4-205ENST00000588745 RHOBTB1O94844 696 aa11.34□□□□□ -0.59
SMAD4-205ENST00000588745 KLHL2O95198 593 aa11.34□□□□□ -0.59
SMAD4-205ENST00000588745 IL1BP01584 269 aa11.34□□□□□ -0.59
SMAD4-205ENST00000588745 ESR1P03372 595 aa11.34□□□□□ -0.59
SMAD4-205ENST00000588745 RPS3P23396 243 aaKnown RBP eCLIP11.34□□□□□ -0.59
SMAD4-205ENST00000588745 FMO4P31512 558 aa11.34□□□□□ -0.59
SMAD4-205ENST00000588745 PPARGP37231 505 aaPredicted RBP11.34□□□□□ -0.59
SMAD4-205ENST00000588745 SLC26A3P40879 764 aa11.34□□□□□ -0.59
SMAD4-205ENST00000588745 KIR2DL1P43626 348 aaPredicted RBP11.34□□□□□ -0.59
SMAD4-205ENST00000588745 PSMD8P48556 350 aa11.34□□□□□ -0.59
SMAD4-205ENST00000588745 KPNA2P52292 529 aaKnown RBP11.34□□□□□ -0.59
SMAD4-205ENST00000588745 METAP1P53582 386 aa11.34□□□□□ -0.59
SMAD4-205ENST00000588745 DCDC1P59894 354 aa11.34□□□□□ -0.59
SMAD4-205ENST00000588745 TIAL1Q01085 375 aaKnown RBP eCLIP11.34□□□□□ -0.596e-7■□□□□ 9.5
SMAD4-205ENST00000588745 DLG1Q12959 904 aa11.34□□□□□ -0.59
SMAD4-205ENST00000588745 PCLAFQ15004 111 aa11.34□□□□□ -0.59
SMAD4-205ENST00000588745 SKIV2LQ15477 1246 aaKnown RBP11.34□□□□□ -0.59
SMAD4-205ENST00000588745 CCDC85BQ15834 202 aaPredicted RBP11.34□□□□□ -0.59
SMAD4-205ENST00000588745 CTSL3PQ5NE16 218 aa11.34□□□□□ -0.59
SMAD4-205ENST00000588745 LYPLAL1Q5VWZ2 237 aa11.34□□□□□ -0.59
SMAD4-205ENST00000588745 LRRC8EQ6NSJ5 796 aa11.34□□□□□ -0.59
SMAD4-205ENST00000588745 FAM47EQ6ZV65 393 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms