RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 D6RAR5 112 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 TMX2-CTNND1H3BSU7 103 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 APOC4-APOC2K7ER74 178 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 TLX3O43711 291 aaPredicted RBP14.36□□□□□ -0.11
DDX39A-208ENST00000588692 APOC2P02655 101 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 MPOP05164 745 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 RPLP0P05388 317 aaKnown RBP14.36□□□□□ -0.11
DDX39A-208ENST00000588692 ADCY8P40145 1251 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 MLLT3P42568 568 aaPredicted RBP14.36□□□□□ -0.11
DDX39A-208ENST00000588692 POLD2P49005 469 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 VAV2P52735 878 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 DCDC1P59894 354 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 ERVPABLB-1P60509 514 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 CTBSQ01459 385 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 ADCY2Q08462 1091 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 WASHC5Q12768 1159 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 PCSK7Q16549 785 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 RAD9BQ6WBX8 426 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 LRRC69Q6ZNQ3 347 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 LYSMD3Q7Z3D4 306 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 C17orf82Q86X59 251 aaPredicted RBP14.36□□□□□ -0.11
DDX39A-208ENST00000588692 CCNJLQ8IV13 435 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 TXLNBQ8N3L3 684 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 PTCD2Q8WV60 388 aaKnown RBP14.36□□□□□ -0.11
DDX39A-208ENST00000588692 ATXN7L3BQ96GX2 97 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 DCBLD2Q96PD2 775 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 QKIQ96PU8 341 aaKnown RBP eCLIP14.36□□□□□ -0.11
DDX39A-208ENST00000588692 BAG1Q99933 345 aaPredicted RBP14.36□□□□□ -0.11
DDX39A-208ENST00000588692 SUDS3Q9H7L9 328 aaPredicted RBP14.36□□□□□ -0.11
DDX39A-208ENST00000588692 TAAR2Q9P1P5 351 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 IMPACTQ9P2X3 320 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 EFR3BQ9Y2G0 817 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 PCDHGA8Q9Y5G5 932 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 PCDHA3Q9Y5H8 950 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 ZFYVE26Q68DK2 2539 aa14.36□□□□□ -0.11
DDX39A-208ENST00000588692 SCN8AQ9UQD0 1980 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 PJA2O43164 708 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 ZW10O43264 779 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 NDST3O95803 873 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 MT-CYBP00156 380 aaPredicted RBP14.35□□□□□ -0.11
DDX39A-208ENST00000588692 CDC25BP30305 580 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 PTPN7P35236 360 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 ABCG1P45844 678 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 PDX1P52945 283 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 NAP1L1P55209 391 aaKnown RBP14.35□□□□□ -0.11
DDX39A-208ENST00000588692 PCBP4P57723 403 aaKnown RBP14.35□□□□□ -0.11
DDX39A-208ENST00000588692 EIF3IQ13347 325 aaKnown RBP14.35□□□□□ -0.11
DDX39A-208ENST00000588692 XRCC4Q13426 336 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 LLGL1Q15334 1064 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 COL28A1Q2UY09 1125 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 PYCR3Q53H96 274 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 C3orf38Q5JPI3 329 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 PDPK2PQ6A1A2 396 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 SLC30A9Q6PML9 568 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 C19orf48Q6RUI8 117 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 B4GALNT4Q76KP1 1039 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 SPRED1Q7Z699 444 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 TRIM74Q86UV6 250 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 ZC3H18Q86VM9 953 aaKnown RBP14.35□□□□□ -0.11
DDX39A-208ENST00000588692 GALNT13Q8IUC8 556 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 SPATA22Q8NHS9 363 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 WDR36Q8NI36 951 aaKnown RBP14.35□□□□□ -0.11
DDX39A-208ENST00000588692 ZDHHC1Q8WTX9 485 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 HTR3CQ8WXA8 447 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 LIN37Q96GY3 246 aaPredicted RBP14.35□□□□□ -0.11
DDX39A-208ENST00000588692 WDR24Q96S15 920 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 FERMT1Q9BQL6 677 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 LRRN3Q9H3W5 708 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 RMI1Q9H9A7 625 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 THSD1Q9NS62 852 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 SPATS2LQ9NUQ6 558 aaKnown RBP14.35□□□□□ -0.11
DDX39A-208ENST00000588692 KLHL8Q9P2G9 620 aaPredicted RBP14.35□□□□□ -0.11
DDX39A-208ENST00000588692 LRIT1Q9P2V4 623 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 FAM153AQ9UHL3 310 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 SATB2Q9UPW6 733 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 TMEM98Q9Y2Y6 226 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 REXO2Q9Y3B8 237 aaKnown RBP14.35□□□□□ -0.11
DDX39A-208ENST00000588692 ZNF711Q9Y462 761 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 RNF215Q9Y6U7 377 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 CELSR3Q9NYQ7 3312 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 LAMA5O15230 3695 aa14.35□□□□□ -0.11
DDX39A-208ENST00000588692 NBEAQ8NFP9 2946 aa14.34□□□□□ -0.11
DDX39A-208ENST00000588692 CCDC187A0A096LP49 1063 aa14.34□□□□□ -0.11
DDX39A-208ENST00000588692 A0A1W2PQM1 296 aa14.34□□□□□ -0.11
DDX39A-208ENST00000588692 INPP4BO15327 924 aa14.34□□□□□ -0.11
DDX39A-208ENST00000588692 PMPCBO75439 489 aa14.34□□□□□ -0.11
DDX39A-208ENST00000588692 FGF1P05230 155 aa14.34□□□□□ -0.11
DDX39A-208ENST00000588692 CTNNA2P26232 953 aa14.34□□□□□ -0.11
DDX39A-208ENST00000588692 AK4P27144 223 aaPredicted RBP14.34□□□□□ -0.11
DDX39A-208ENST00000588692 CETN2P41208 172 aa14.34□□□□□ -0.11
DDX39A-208ENST00000588692 ACTR1BP42025 376 aa14.34□□□□□ -0.11
DDX39A-208ENST00000588692 TNNT3P45378 269 aaPredicted RBP14.34□□□□□ -0.11
DDX39A-208ENST00000588692 ACTR1AP61163 376 aa14.34□□□□□ -0.11
DDX39A-208ENST00000588692 CCL7P80098 99 aa14.34□□□□□ -0.11
DDX39A-208ENST00000588692 CCDC181Q5TID7 509 aa14.34□□□□□ -0.11
DDX39A-208ENST00000588692 KDELC2Q7Z4H8 507 aa14.34□□□□□ -0.11
DDX39A-208ENST00000588692 ZNF438Q7Z4V0 828 aa14.34□□□□□ -0.11
DDX39A-208ENST00000588692 TMC3Q7Z5M5 1100 aa14.34□□□□□ -0.11
DDX39A-208ENST00000588692 HNRNPLLQ8WVV9 542 aaKnown RBP14.34□□□□□ -0.11
DDX39A-208ENST00000588692 HAUS1Q96CS2 278 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms