RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 FERMT1Q9BQL6 677 aa19.44■□□□□ 0.7
TPM4-208ENST00000588410 GPR63Q9BZJ6 419 aa19.44■□□□□ 0.7
TPM4-208ENST00000588410 MAGEE1Q9HCI5 957 aa19.44■□□□□ 0.7
TPM4-208ENST00000588410 SPATS2LQ9NUQ6 558 aaKnown RBP19.44■□□□□ 0.7
TPM4-208ENST00000588410 UBP1Q9NZI7 540 aa19.44■□□□□ 0.7
TPM4-208ENST00000588410 LRIT1Q9P2V4 623 aa19.44■□□□□ 0.7
TPM4-208ENST00000588410 IMPACTQ9P2X3 320 aa19.44■□□□□ 0.7
TPM4-208ENST00000588410 FAM153AQ9UHL3 310 aa19.44■□□□□ 0.7
TPM4-208ENST00000588410 RABGEF1Q9UJ41 708 aa19.44■□□□□ 0.7
TPM4-208ENST00000588410 SHOC2Q9UQ13 582 aa19.44■□□□□ 0.7
TPM4-208ENST00000588410 REXO2Q9Y3B8 237 aaKnown RBP19.44■□□□□ 0.7
TPM4-208ENST00000588410 PCDHA3Q9Y5H8 950 aa19.44■□□□□ 0.7
TPM4-208ENST00000588410 ENTPD2Q9Y5L3 495 aa19.44■□□□□ 0.7
TPM4-208ENST00000588410 A0A087WV48 116 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 CCDC66A2RUB6 948 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 GOLGA6L6A8MZA4 724 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 H7C0C1 242 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 NDST3O95803 873 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 PIRTP0C851 137 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 NFKB1P19838 968 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 AK4P27144 223 aaPredicted RBP19.43■□□□□ 0.7
TPM4-208ENST00000588410 RBMS1P29558 406 aaKnown RBP19.43■□□□□ 0.7
TPM4-208ENST00000588410 ACTR1BP42025 376 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 ATP5OP48047 213 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 RWDD2BP57060 319 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 ACTR1AP61163 376 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 WASHC5Q12768 1159 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 HLTFQ14527 1009 aaKnown RBP eCLIP19.43■□□□□ 0.7
TPM4-208ENST00000588410 COL28A1Q2UY09 1125 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 TBC1D25Q3MII6 688 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 C3orf38Q5JPI3 329 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 NRROSQ86YC3 692 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 CCNJLQ8IV13 435 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 SPC24Q8NBT2 197 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 SCARF2Q96GP6 870 aaPredicted RBP19.43■□□□□ 0.7
TPM4-208ENST00000588410 COX14Q96I36 57 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 ZNF578Q96N58 590 aaPredicted RBP19.43■□□□□ 0.7
TPM4-208ENST00000588410 QKIQ96PU8 341 aaKnown RBP eCLIP19.43■□□□□ 0.7
TPM4-208ENST00000588410 SPATA16Q9BXB7 569 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 LACRTQ9GZZ8 138 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 LRRN3Q9H3W5 708 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 APPL1Q9UKG1 709 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 ZNF711Q9Y462 761 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 RNF215Q9Y6U7 377 aa19.43■□□□□ 0.7
TPM4-208ENST00000588410 MACROD2A1Z1Q3 448 aa19.42■□□□□ 0.7
TPM4-208ENST00000588410 RHPN2P1A8MT19 583 aa19.42■□□□□ 0.7
TPM4-208ENST00000588410 TMX2-CTNND1H3BSU7 103 aa19.42■□□□□ 0.7
TPM4-208ENST00000588410 APOC4-APOC2K7ER74 178 aa19.42■□□□□ 0.7
TPM4-208ENST00000588410 NTN3O00634 580 aaPredicted RBP19.42■□□□□ 0.7
TPM4-208ENST00000588410 ZW10O43264 779 aa19.42■□□□□ 0.7
TPM4-208ENST00000588410 TLX3O43711 291 aaPredicted RBP19.42■□□□□ 0.7
TPM4-208ENST00000588410 NUDT21O43809 227 aaKnown RBP19.42■□□□□ 0.7
TPM4-208ENST00000588410 APOC2P02655 101 aa19.42■□□□□ 0.7
TPM4-208ENST00000588410 FGF1P05230 155 aa19.42■□□□□ 0.7
TPM4-208ENST00000588410 PNLIPP16233 465 aa19.42■□□□□ 0.7
TPM4-208ENST00000588410 CTNNA2P26232 953 aa19.42■□□□□ 0.7
TPM4-208ENST00000588410 CDC25BP30305 580 aa19.42■□□□□ 0.7
TPM4-208ENST00000588410 XRCC4Q13426 336 aa19.42■□□□□ 0.7
TPM4-208ENST00000588410 PYCR3Q53H96 274 aa19.42■□□□□ 0.7
TPM4-208ENST00000588410 HENMT1Q5T8I9 393 aaKnown RBP19.42■□□□□ 0.7
TPM4-208ENST00000588410 ALS2CLQ60I27 953 aa19.42■□□□□ 0.7
TPM4-208ENST00000588410 FOXR1Q6PIV2 292 aa19.42■□□□□ 0.7
TPM4-208ENST00000588410 SFTPA2Q8IWL1 248 aa19.42■□□□□ 0.7
TPM4-208ENST00000588410 SNIP1Q8TAD8 396 aaKnown RBP19.42■□□□□ 0.7
TPM4-208ENST00000588410 WDR24Q96S15 920 aa19.42■□□□□ 0.7
TPM4-208ENST00000588410 STRADBQ9C0K7 418 aa19.42■□□□□ 0.7
TPM4-208ENST00000588410 VPS18Q9P253 973 aa19.42■□□□□ 0.7
TPM4-208ENST00000588410 ZNHIT2Q9UHR6 403 aa19.42■□□□□ 0.7
TPM4-208ENST00000588410 TRHDEQ9UKU6 1024 aa19.42■□□□□ 0.7
TPM4-208ENST00000588410 SATB2Q9UPW6 733 aa19.42■□□□□ 0.7
TPM4-208ENST00000588410 TDRD6O60522 2096 aaKnown RBP19.41■□□□□ 0.7
TPM4-208ENST00000588410 D6RAR5 112 aa19.41■□□□□ 0.7
TPM4-208ENST00000588410 CASC3O15234 703 aaKnown RBP19.41■□□□□ 0.7
TPM4-208ENST00000588410 PJA2O43164 708 aa19.41■□□□□ 0.7
TPM4-208ENST00000588410 ATP1A1P05023 1023 aaKnown RBP19.41■□□□□ 0.7
TPM4-208ENST00000588410 PTMAP06454 111 aaKnown RBP19.41■□□□□ 0.7
TPM4-208ENST00000588410 CD68P34810 354 aaPredicted RBP19.41■□□□□ 0.7
TPM4-208ENST00000588410 EIF2S3P41091 472 aaKnown RBP19.41■□□□□ 0.7
TPM4-208ENST00000588410 ABCG1P45844 678 aa19.41■□□□□ 0.7
TPM4-208ENST00000588410 MAZP56270 477 aaKnown RBP19.41■□□□□ 0.7
TPM4-208ENST00000588410 WNT3AP56704 352 aa19.41■□□□□ 0.7
TPM4-208ENST00000588410 KIF5AQ12840 1032 aa19.41■□□□□ 0.7
TPM4-208ENST00000588410 LRP8Q14114 963 aa19.41■□□□□ 0.7
TPM4-208ENST00000588410 ZNF569Q5MCW4 686 aa19.41■□□□□ 0.7
TPM4-208ENST00000588410 TMC3Q7Z5M5 1100 aa19.41■□□□□ 0.7
TPM4-208ENST00000588410 ZNF567Q8N184 647 aa19.41■□□□□ 0.7
TPM4-208ENST00000588410 WDR36Q8NI36 951 aaKnown RBP19.41■□□□□ 0.7
TPM4-208ENST00000588410 OSBPL8Q9BZF1 889 aa19.41■□□□□ 0.7
TPM4-208ENST00000588410 EPB41L5Q9HCM4 733 aa19.41■□□□□ 0.7
TPM4-208ENST00000588410 THSD1Q9NS62 852 aa19.41■□□□□ 0.7
TPM4-208ENST00000588410 RSPH14Q9UHP6 348 aa19.41■□□□□ 0.7
TPM4-208ENST00000588410 RALYQ9UKM9 306 aaKnown RBP19.41■□□□□ 0.7
TPM4-208ENST00000588410 EFR3BQ9Y2G0 817 aa19.41■□□□□ 0.7
TPM4-208ENST00000588410 PLEKHM1Q9Y4G2 1056 aa19.41■□□□□ 0.7
TPM4-208ENST00000588410 GOLGA4Q13439 2230 aaKnown RBP19.4■□□□□ 0.7
TPM4-208ENST00000588410 CCDC187A0A096LP49 1063 aa19.4■□□□□ 0.7
TPM4-208ENST00000588410 A0A1W2PQM1 296 aa19.4■□□□□ 0.7
TPM4-208ENST00000588410 FADS2P1A8MWK0 482 aa19.4■□□□□ 0.7
TPM4-208ENST00000588410 F5H423 210 aaPredicted RBP19.4■□□□□ 0.7
TPM4-208ENST00000588410 DXOO77932 396 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms