RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 CPSF7Q8N684 471 aaKnown RBP14.63□□□□□ -0.07
CCDC43-203ENST00000588210 TSNARE1Q96NA8 513 aa14.63□□□□□ -0.07
CCDC43-203ENST00000588210 APOL2Q9BQE5 337 aa14.63□□□□□ -0.07
CCDC43-203ENST00000588210 BBS2Q9BXC9 721 aa14.63□□□□□ -0.07
CCDC43-203ENST00000588210 VPS28Q9UK41 221 aa14.63□□□□□ -0.07
CCDC43-203ENST00000588210 SLC39A10Q9ULF5 831 aa14.63□□□□□ -0.07
CCDC43-203ENST00000588210 SIT1Q9Y3P8 196 aa14.63□□□□□ -0.07
CCDC43-203ENST00000588210 NYNRINQ9P2P1 1898 aaKnown RBP14.63□□□□□ -0.07
CCDC43-203ENST00000588210 FAM170BA6NMN3 283 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 SLCO1B7G3V0H7 640 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 TK2O00142 265 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 CACNG3O60359 315 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 MOCS2O96007 188 aaPredicted RBP14.62□□□□□ -0.07
CCDC43-203ENST00000588210 COL6A2P12110 1019 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 GRIA4P48058 902 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 GALK1P51570 392 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 MED21Q13503 144 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 UBXN2BQ14CS0 331 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 HERC3Q15034 1050 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 TRIP10Q15642 601 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 C11orf91Q3C1V1 193 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 OGFRL1Q5TC84 451 aaPredicted RBP14.62□□□□□ -0.07
CCDC43-203ENST00000588210 SDCCAG8Q86SQ7 713 aaPredicted RBP14.62□□□□□ -0.07
CCDC43-203ENST00000588210 LINC00523Q86TU6 105 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 PJA1Q8NG27 643 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 RP9Q8TA86 221 aaKnown RBP14.62□□□□□ -0.07
CCDC43-203ENST00000588210 STYXQ8WUJ0 223 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 TSGA13Q96PP4 275 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 BTBD9Q96Q07 612 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 SERPINI1Q99574 410 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 P2RY13Q9BPV8 354 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 ARHGEF38Q9NXL2 777 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 CPSF2Q9P2I0 782 aaKnown RBP14.62□□□□□ -0.07
CCDC43-203ENST00000588210 VTI1BQ9UEU0 232 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 TLK1Q9UKI8 766 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 COL4A3Q01955 1670 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 RGSL1A5PLK6 1076 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 NEDD8-MDP1E9PL57 170 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 GFRA2O00451 464 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 PIGNO95427 931 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 TYRP14679 529 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 OPRD1P41143 372 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 NUDT2P50583 147 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 NSUN2Q08J23 767 aaKnown RBP eCLIP14.62□□□□□ -0.07
CCDC43-203ENST00000588210 GRSF1Q12849 480 aaKnown RBP eCLIP14.62□□□□□ -0.07
CCDC43-203ENST00000588210 PON2Q15165 354 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 TMEM196Q5HYL7 178 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 ACBD5Q5T8D3 534 aaPredicted RBP14.62□□□□□ -0.07
CCDC43-203ENST00000588210 ASTLQ6HA08 431 aaPredicted RBP14.62□□□□□ -0.07
CCDC43-203ENST00000588210 NADSYN1Q6IA69 706 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 SNX32Q86XE0 403 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 CNTN4Q8IWV2 1026 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 TMA16Q96EY4 203 aaKnown RBP14.62□□□□□ -0.07
CCDC43-203ENST00000588210 CENPKQ9BS16 269 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 FOXQ1Q9C009 403 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 TKTL2Q9H0I9 626 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 C6orf203Q9P0P8 240 aaPredicted RBP14.62□□□□□ -0.07
CCDC43-203ENST00000588210 NDRG2Q9UN36 371 aaKnown RBP14.62□□□□□ -0.07
CCDC43-203ENST00000588210 PSMD13Q9UNM6 376 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 CUL9Q8IWT3 2517 aa14.62□□□□□ -0.07
CCDC43-203ENST00000588210 F5P12259 2224 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 GRID2O43424 1007 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 PENKP01210 267 aaPredicted RBP14.61□□□□□ -0.07
CCDC43-203ENST00000588210 SLC35E2BP0CK96 405 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 TPH1P17752 444 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 DRD1P21728 446 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 SLC6A4P31645 630 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 SERPINB5P36952 375 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 PPARGP37231 505 aaPredicted RBP14.61□□□□□ -0.07
CCDC43-203ENST00000588210 POLD2P49005 469 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 SATB1Q01826 763 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 SLC12A1Q13621 1099 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 UGP2Q16851 508 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 LRRC36Q1X8D7 754 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 LSM12Q3MHD2 195 aaKnown RBP14.61□□□□□ -0.07
CCDC43-203ENST00000588210 ETFBKMTQ8IXQ9 262 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 ZNF687Q8N1G0 1237 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 EFCAB3Q8N7B9 438 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 KYQ8NBH2 561 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 HIPK4Q8NE63 616 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 AGR3Q8TD06 166 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 DDI1Q8WTU0 396 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 WDR55Q9H6Y2 383 aaPredicted RBP14.61□□□□□ -0.07
CCDC43-203ENST00000588210 MTF2Q9Y483 593 aaPredicted RBP14.61□□□□□ -0.07
CCDC43-203ENST00000588210 MYOFQ9NZM1 2061 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 GOLGA8QA0A0J9YX86 632 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 GOLGA8OA6NCC3 632 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 TARM1B6A8C7 271 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 GOLGA8NF8WBI6 632 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 NEMP1O14524 444 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 LRIG2O94898 1065 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 JCHAINP01591 159 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 VCLP18206 1134 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 USP10Q14694 798 aaKnown RBP14.61□□□□□ -0.07
CCDC43-203ENST00000588210 LIN52Q52LA3 116 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 ARL13AQ5H913 290 aaPredicted RBP14.61□□□□□ -0.07
CCDC43-203ENST00000588210 MS4A13Q5J8X5 152 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 MPP7Q5T2T1 576 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 PIK3R6Q5UE93 754 aa14.61□□□□□ -0.07
CCDC43-203ENST00000588210 LRRC8EQ6NSJ5 796 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms