RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 TAF3Q5VWG9 929 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 DOK6Q6PKX4 331 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 DPPA4Q7L190 304 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 SRRM1Q8IYB3 904 aaKnown RBP8.53□□□□□ -1.04
SDF2-204ENST00000587338 CCDC185Q8N715 623 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 RTL3Q8N8U3 475 aaKnown RBP8.53□□□□□ -1.04
SDF2-204ENST00000587338 MSANTD4Q8NCY6 345 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 SPDYE1Q8NFV5 336 aaPredicted RBP8.53□□□□□ -1.04
SDF2-204ENST00000587338 NUS1Q96E22 293 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 CCDC42Q96M95 316 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 TUBGCP5Q96RT8 1024 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 DNAJC7Q99615 494 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 SLC38A3Q99624 504 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 CHP1Q99653 195 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 ULBP3Q9BZM4 244 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 ATP13A3Q9H7F0 1226 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 FBXO8Q9NRD0 319 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 TRNAU1APQ9NX07 287 aaKnown RBP8.53□□□□□ -1.04
SDF2-204ENST00000587338 GOLGA6AQ9NYA3 693 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 KLHL3Q9UH77 587 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 TMEM59LQ9UK28 342 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 CROTQ9UKG9 612 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 ST14Q9Y5Y6 855 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 F8P00451 2351 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 PDZD2O15018 2839 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 NF1P21359 2839 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 F8VZ95 297 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 FOXN3O00409 490 aaPredicted RBP8.52□□□□□ -1.05
SDF2-204ENST00000587338 POLR1CO15160 346 aaPredicted RBP8.52□□□□□ -1.05
SDF2-204ENST00000587338 AKR1B10O60218 316 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 DNAJB5O75953 348 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 IPO7O95373 1038 aaKnown RBP8.52□□□□□ -1.05
SDF2-204ENST00000587338 MAP3K6O95382 1288 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 CLDN1O95832 211 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 DDAH2O95865 285 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 SERPING1P05155 500 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 SDC4P31431 198 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 CDH5P33151 784 aaPredicted RBP8.52□□□□□ -1.05
SDF2-204ENST00000587338 CYLC1P35663 651 aaPredicted RBP8.52□□□□□ -1.05
SDF2-204ENST00000587338 ADCY8P40145 1251 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 POLD2P49005 469 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 RIPPLY3P57055 190 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 MRPL49Q13405 166 aaKnown RBP8.52□□□□□ -1.05
SDF2-204ENST00000587338 EIF2S3LQ2VIR3 472 aaKnown RBP8.52□□□□□ -1.05
SDF2-204ENST00000587338 PARP15Q460N3 678 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 DENND2CQ68D51 928 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 DPY19L2P1Q6NXN4 242 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 WDR59Q6PJI9 974 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 ARHGAP22Q7Z5H3 698 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 TICAM1Q8IUC6 712 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 PYROXD2Q8N2H3 581 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 C17orf53Q8N3J3 647 aaPredicted RBP8.52□□□□□ -1.05
SDF2-204ENST00000587338 PRR7Q8TB68 274 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 RXFP2Q8WXD0 754 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 NCSTNQ92542 709 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 SYN2Q92777 582 aaPredicted RBP8.52□□□□□ -1.05
SDF2-204ENST00000587338 OR2M4Q96R27 311 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 DESI2Q9BSY9 194 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 FRMD8Q9BZ67 464 aaPredicted RBP8.52□□□□□ -1.05
SDF2-204ENST00000587338 TWSG1Q9GZX9 223 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 NHEJ1Q9H9Q4 299 aaPredicted RBP8.52□□□□□ -1.05
SDF2-204ENST00000587338 SEPT11Q9NVA2 429 aaKnown RBP8.52□□□□□ -1.05
SDF2-204ENST00000587338 TRMT1Q9NXH9 659 aaKnown RBP8.52□□□□□ -1.05
SDF2-204ENST00000587338 MAP10Q9P2G4 905 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 PDP2Q9P2J9 529 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 RCOR3Q9P2K3 495 aaPredicted RBP8.52□□□□□ -1.05
SDF2-204ENST00000587338 MYO6Q9UM54 1294 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 PLEKHM1Q9Y4G2 1056 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 SHANK1Q9Y566 2161 aa8.52□□□□□ -1.05
SDF2-204ENST00000587338 ESPNB1AK53 854 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 J3KR12 359 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 INPP4BO15327 924 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 LSM8O95777 96 aaKnown RBP8.51□□□□□ -1.05
SDF2-204ENST00000587338 IVLP07476 585 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 POU3F2P20265 443 aaPredicted RBP8.51□□□□□ -1.05
SDF2-204ENST00000587338 TNFAIP3P21580 790 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 ELAVL4P26378 380 aaKnown RBP8.51□□□□□ -1.05
SDF2-204ENST00000587338 RGRP47804 291 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 PGDP52209 483 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 JAM2P57087 298 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 YBEYP58557 167 aaPredicted RBP8.51□□□□□ -1.05
SDF2-204ENST00000587338 BPIFB4P59827 614 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 CDK3Q00526 305 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 BCL2L1Q07817 233 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 FOXM1Q08050 763 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 NFATC2Q13469 925 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 MAP7Q14244 749 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 SPA17Q15506 151 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 CCDC14Q49A88 953 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 NADK2Q4G0N4 442 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 PRR30Q53SZ7 412 aaPredicted RBP8.51□□□□□ -1.05
SDF2-204ENST00000587338 NAA35Q5VZE5 725 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 AFMIDQ63HM1 303 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 E4F1Q66K89 784 aaPredicted RBP8.51□□□□□ -1.05
SDF2-204ENST00000587338 RAET1GQ6H3X3 334 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 WDR74Q6RFH5 385 aaPredicted RBP8.51□□□□□ -1.05
SDF2-204ENST00000587338 C6orf15Q6UXA7 325 aaPredicted RBP8.51□□□□□ -1.05
SDF2-204ENST00000587338 RAD9BQ6WBX8 426 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 ARCQ7LC44 396 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 SRLQ86TD4 932 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms