RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 KCTD10Q9H3F6 313 aa4.85□□□□□ -1.63
ZNF540-204ENST00000586792 ZFP14Q9HCL3 533 aa4.85□□□□□ -1.63
ZNF540-204ENST00000586792 ARHGEF3Q9NR81 526 aa4.85□□□□□ -1.63
ZNF540-204ENST00000586792 ABCF3Q9NUQ8 709 aa4.85□□□□□ -1.63
ZNF540-204ENST00000586792 COMMD8Q9NX08 183 aa4.85□□□□□ -1.63
ZNF540-204ENST00000586792 IFT80Q9P2H3 777 aaPredicted RBP4.85□□□□□ -1.63
ZNF540-204ENST00000586792 CPSF2Q9P2I0 782 aaKnown RBP4.85□□□□□ -1.63
ZNF540-204ENST00000586792 SLC13A4Q9UKG4 626 aa4.85□□□□□ -1.63
ZNF540-204ENST00000586792 GTF3C4Q9UKN8 822 aa4.85□□□□□ -1.63
ZNF540-204ENST00000586792 CA14Q9ULX7 337 aa4.85□□□□□ -1.63
ZNF540-204ENST00000586792 GPR34Q9UPC5 381 aa4.85□□□□□ -1.63
ZNF540-204ENST00000586792 PCDHGB6Q9Y5F9 930 aa4.85□□□□□ -1.63
ZNF540-204ENST00000586792 WNT6Q9Y6F9 365 aa4.85□□□□□ -1.63
ZNF540-204ENST00000586792 PTPRJQ12913 1337 aa4.85□□□□□ -1.63
ZNF540-204ENST00000586792 CACNA1IQ9P0X4 2223 aa4.85□□□□□ -1.63
ZNF540-204ENST00000586792 KLHL33A6NCF5 533 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 ZNF263O14978 683 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 SLC16A3O15427 465 aaKnown RBP4.84□□□□□ -1.63
ZNF540-204ENST00000586792 P4HA2O15460 535 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 KIF5CO60282 957 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 N4BP1O75113 896 aaKnown RBP4.84□□□□□ -1.63
ZNF540-204ENST00000586792 TACC1O75410 805 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 ECI2O75521 394 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 B3GALNT1O75752 331 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 SOAT2O75908 522 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 AKAP3O75969 853 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 FKBP9O95302 570 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 GNA14O95837 355 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 GPANK1O95872 356 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 DNTTP04053 509 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 HAPLN1P10915 354 aaPredicted RBP4.84□□□□□ -1.63
ZNF540-204ENST00000586792 MTHFD1P11586 935 aaKnown RBP4.84□□□□□ -1.63
ZNF540-204ENST00000586792 GJA1P17302 382 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 PSMC3P17980 439 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 ATF6P18850 670 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 GTF2H1P32780 548 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 CRHR1P34998 444 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 GNL1P36915 607 aaPredicted RBP4.84□□□□□ -1.63
ZNF540-204ENST00000586792 PRCPP42785 496 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 GCLMP48507 274 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 SLC8A3P57103 927 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 MYL6P60660 151 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 YWHAEP62258 255 aaKnown RBP4.84□□□□□ -1.63
ZNF540-204ENST00000586792 NOP14P78316 857 aaKnown RBP4.84□□□□□ -1.63
ZNF540-204ENST00000586792 FKBP3Q00688 224 aaKnown RBP4.84□□□□□ -1.63
ZNF540-204ENST00000586792 ENPEPQ07075 957 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 SLC10A2Q12908 348 aaPredicted RBP4.84□□□□□ -1.63
ZNF540-204ENST00000586792 SLC5A9Q2M3M2 681 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 CFAP221Q4G0U5 840 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 ODF2Q5BJF6 829 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 MDH1BQ5I0G3 518 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 ARMC4Q5T2S8 1044 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 NUGGCQ68CJ6 796 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 KRT39Q6A163 491 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 FCRLBQ6BAA4 426 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 ABRAXAS1Q6UWZ7 409 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 DENND5BQ6ZUT9 1274 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 FKBP9P1Q75LS8 142 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 KDELC2Q7Z4H8 507 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 DNAJB7Q7Z6W7 309 aaPredicted RBP4.84□□□□□ -1.63
ZNF540-204ENST00000586792 GALNT13Q8IUC8 556 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 TRIML1Q8N9V2 468 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 ZBTB34Q8NCN2 500 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 B3GALNT2Q8NCR0 500 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 ENGASEQ8NFI3 743 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 MYCBPAPQ8TBZ2 947 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 TMEM174Q8WUU8 243 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 DEPDC1BQ8WUY9 529 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 UCMAQ8WVF2 138 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 ATP2A3Q93084 1043 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 MYLPFQ96A32 169 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 EXOC4Q96A65 974 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 ELSPBP1Q96BH3 223 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 FAM122AQ96E09 287 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 DHTKD1Q96HY7 919 aaPredicted RBP4.84□□□□□ -1.63
ZNF540-204ENST00000586792 ZNF48Q96MX3 618 aaPredicted RBP4.84□□□□□ -1.63
ZNF540-204ENST00000586792 NT5C1BQ96P26 610 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 SLITRK1Q96PX8 696 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 RTP3Q9BQQ7 232 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 ZSWIM1Q9BR11 485 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 MRPL45Q9BRJ2 306 aaKnown RBP4.84□□□□□ -1.63
ZNF540-204ENST00000586792 TRMT61BQ9BVS5 477 aaKnown RBP4.84□□□□□ -1.63
ZNF540-204ENST00000586792 NACA2Q9H009 215 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 NUP62CLQ9H1M0 184 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 SMOC2Q9H3U7 446 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 ZMAT4Q9H898 229 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 TMEM8AQ9HCN3 771 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 TRPC7Q9HCX4 862 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 OLA1Q9NTK5 396 aaKnown RBP4.84□□□□□ -1.63
ZNF540-204ENST00000586792 OXSMQ9NWU1 459 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 THG1LQ9NWX6 298 aaKnown RBP4.84□□□□□ -1.63
ZNF540-204ENST00000586792 WNT16Q9UBV4 365 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 GIMAP2Q9UG22 337 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 ARMCX3Q9UH62 379 aaPredicted RBP4.84□□□□□ -1.63
ZNF540-204ENST00000586792 TBK1Q9UHD2 729 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 SIX4Q9UIU6 781 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 CDC23Q9UJX2 597 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 ZNF580Q9UK33 172 aa4.84□□□□□ -1.63
ZNF540-204ENST00000586792 MRPS17Q9Y2R5 130 aaKnown RBP4.84□□□□□ -1.63
ZNF540-204ENST00000586792 REV3LO60673 3130 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms