RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 GSTA4O15217 222 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 KDELR3O43731 214 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 SLC25A14O95258 325 aaPredicted RBP12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 SNRPD1P62314 119 aaKnown RBP12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 ACAP2Q15057 778 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 PSAPL1Q6NUJ1 521 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 IL27RAQ6UWB1 636 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 SERPINA9Q86WD7 417 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 ZBTB18Q99592 522 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 COPS7BQ9H9Q2 264 aaPredicted RBP12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 HCFC1R1Q9NWW0 138 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 EIF2B4Q9UI10 523 aaKnown RBP12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 SMAD6O43541 496 aaKnown RBP12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 TBX10O75333 385 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 C1QAP02745 245 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 JUNP05412 331 aaKnown RBP12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 GCKP35557 465 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 NTHL1P78549 312 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 KLC1Q07866 573 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 TCTN1Q2MV58 587 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 SYTL3Q4VX76 610 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 LPCAT4Q643R3 524 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 DSELQ8IZU8 1212 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 NCLNQ969V3 563 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 EFHD1Q9BUP0 239 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 SEMA6AQ9H2E6 1030 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 ACTR8Q9H981 624 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 MKS1Q9NXB0 559 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 KIAA1522Q9P206 1035 aaPredicted RBP12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 SORCS3Q9UPU3 1222 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 SLC2A4P14672 509 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 MSLNQ13421 630 aaPredicted RBP12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 MANEALQ5VSG8 457 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 ANGPTL8Q6UXH0 198 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 ZNF276Q8N554 614 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 NKAPQ8N5F7 415 aaKnown RBP12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 BHLHE22Q8NFJ8 381 aaPredicted RBP12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 OR13J1Q8NGT2 312 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 EME1Q96AY2 570 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 CNDP1Q96KN2 507 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 FEM1AQ9BSK4 669 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 ZNF334Q9HCZ1 680 aaPredicted RBP12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 TLR9Q9NR96 1032 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 SNX13Q9Y5W8 968 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 SLC4A7Q9Y6M7 1214 aa12.4□□□□□ -0.42
SMARCA4-208ENST00000585799 A0A0G2JMZ2 1700 aa12.4□□□□□ -0.43
SMARCA4-208ENST00000585799 RNF103-CHMP3A0A140T963 221 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 ABHD14A-ACY1A0A1B0GW23 586 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 ANPEPP15144 967 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 ME2P23368 584 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 CCNG1P51959 295 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 NFYCQ13952 458 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 PAOXQ6QHF9 649 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 TMC5Q6UXY8 1006 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 CLYBLQ8N0X4 340 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 SCML4Q8N228 414 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 DNAJB14Q8TBM8 379 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 CYB5D2Q8WUJ1 264 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 PTCD3Q96EY7 689 aaKnown RBP12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 SLC39A3Q9BRY0 314 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 C11orf49Q9H6J7 331 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 NMRK1Q9NWW6 199 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 KLQ9UEF7 1012 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 CDH22Q9UJ99 828 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 WNT6Q9Y6F9 365 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 PPP6CO00743 305 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 ARNTP27540 789 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 ARCN1P48444 511 aaKnown RBP12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 AGTR2P50052 363 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 PSME3P61289 254 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 TCEA2Q15560 299 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 TAF1AQ15573 450 aaPredicted RBP12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 TTLL9Q3SXZ7 439 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 MPPE1Q53F39 396 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 SLC8B1Q6J4K2 584 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 MILR1Q7Z6M3 343 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 EEF1AKMT1Q8WVE0 214 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 SPDL1Q96EA4 605 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 ZFP14Q9HCL3 533 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 LNPEPQ9UIQ6 1025 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 MATN2O00339 956 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 TRAFD1O14545 582 aaPredicted RBP12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 PIP5K1BO14986 540 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 INPP4BO15327 924 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 LDB2O43679 373 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 CAPN15O75808 1086 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 POLR2EP19388 210 aaKnown RBP12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 HOXD9P28356 352 aaPredicted RBP12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 HSPA7P48741 367 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 EPGNQ6UW88 154 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 Q6ZVU0 165 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 OR56A4Q8NGH8 313 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 SORCS1Q8WY21 1168 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 DPF3Q92784 378 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 STN1Q9H668 368 aaKnown RBP12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 DYRK4Q9NR20 520 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 ARL15Q9NXU5 204 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 GALPQ9UBC7 116 aa12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.39□□□□□ -0.43
SMARCA4-208ENST00000585799 EGFL7Q9UHF1 273 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms