RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 CLCN5P51795 746 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 TPTEP56180 551 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 RPL38P63173 70 aaKnown RBP10.55□□□□□ -0.72
RNF43-207ENST00000583753 DDR2Q16832 855 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 PTRHD1Q6GMV3 140 aaKnown RBP10.55□□□□□ -0.72
RNF43-207ENST00000583753 GPRC5AQ8NFJ5 357 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 OR10A6Q8NH74 314 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 HERC2P3Q9BVR0 1158 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 INTS7Q9NVH2 962 aaKnown RBP10.55□□□□□ -0.72
RNF43-207ENST00000583753 ATAD3AQ9NVI7 634 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 MARCH4Q9P2E8 410 aaPredicted RBP10.55□□□□□ -0.72
RNF43-207ENST00000583753 IPPQ9Y573 584 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 A0A0U1RQS6 177 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 SLC12A8A0AV02 714 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 PFDN6O15212 129 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 NPHS1O60500 1241 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 DIRAS1O95057 198 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 FADS2O95864 444 aaKnown RBP10.54□□□□□ -0.72
RNF43-207ENST00000583753 CAPN3P20807 821 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 SERPINB10P48595 397 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 AGTR2P50052 363 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 FPGSQ05932 587 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 TNK2Q07912 1038 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 SLC10A7Q0GE19 358 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 C11orf74Q86VG3 221 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 RETREG3Q86VR2 466 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 SMG8Q8ND04 991 aaKnown RBP10.54□□□□□ -0.72
RNF43-207ENST00000583753 OSBPL2Q9H1P3 480 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 COMMD8Q9NX08 183 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 SLAMF8Q9P0V8 285 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 VPS51Q9UID3 782 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 VPS4AQ9UN37 437 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 NME7Q9Y5B8 376 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 A0A1W2PQ67 120 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 ACOT8O14734 319 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 DCLK1O15075 740 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 STX7O15400 261 aaKnown RBP10.54□□□□□ -0.72
RNF43-207ENST00000583753 CD3EAPO15446 510 aaKnown RBP10.54□□□□□ -0.72
RNF43-207ENST00000583753 XPNPEP2O43895 674 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 USP2O75604 605 aaPredicted RBP10.54□□□□□ -0.72
RNF43-207ENST00000583753 TBX18O95935 607 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 FMO3P31513 532 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 CCT8P50990 548 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 ARSDP51689 593 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 BMXP51813 675 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 NKX2-5P52952 324 aaPredicted RBP10.54□□□□□ -0.72
RNF43-207ENST00000583753 PSMD5Q16401 504 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 TRIM60Q495X7 471 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 P3H2Q8IVL5 708 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 POC5Q8NA72 575 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 NCSTNQ92542 709 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 PSMG2Q969U7 264 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 FAM120BQ96EK7 910 aaKnown RBP10.54□□□□□ -0.72
RNF43-207ENST00000583753 SMARCD1Q96GM5 515 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 PRKD2Q9BZL6 878 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 REXO4Q9GZR2 422 aaKnown RBP10.54□□□□□ -0.72
RNF43-207ENST00000583753 AGO3Q9H9G7 860 aaKnown RBP10.54□□□□□ -0.72
RNF43-207ENST00000583753 LTB4R2Q9NPC1 389 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 RCOR3Q9P2K3 495 aaPredicted RBP10.54□□□□□ -0.72
RNF43-207ENST00000583753 KLQ9UEF7 1012 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 EIF2B4Q9UI10 523 aaKnown RBP10.54□□□□□ -0.72
RNF43-207ENST00000583753 INVSQ9Y283 1065 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 SNX8Q9Y5X2 465 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 IGKV6D-21A0A0A0MT36 114 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 H3BMQ9 156 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 CBX4O00257 560 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 FAM20BO75063 409 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 SEC22BO75396 215 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 SEC24AO95486 1093 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 CPSF4O95639 269 aaKnown RBP10.54□□□□□ -0.72
RNF43-207ENST00000583753 MYCP01106 439 aaPredicted RBP10.54□□□□□ -0.72
RNF43-207ENST00000583753 THRBP10828 461 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 COL6A2P12110 1019 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 RPS12P25398 132 aaKnown RBP10.54□□□□□ -0.72
RNF43-207ENST00000583753 MAGEA6P43360 314 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 CLCQ05315 142 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 PAFAH1B3Q15102 231 aaKnown RBP10.54□□□□□ -0.72
RNF43-207ENST00000583753 PAQR3Q6TCH7 311 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 GPR180Q86V85 440 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 HM13Q8TCT9 377 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 TMBIM1Q969X1 311 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 COG8Q96MW5 612 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 GPR21Q99679 349 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 SMOQ99835 787 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 HMG20AQ9NP66 347 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 SCN3BQ9NY72 215 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 TAS2R13Q9NYV9 303 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 ADGRE2Q9UHX3 823 aa10.54□□□□□ -0.72
RNF43-207ENST00000583753 LEF1Q9UJU2 399 aaPredicted RBP10.54□□□□□ -0.72
RNF43-207ENST00000583753 SCN9AQ15858 1988 aa10.53□□□□□ -0.72
RNF43-207ENST00000583753 G3V2T6 193 aa10.53□□□□□ -0.72
RNF43-207ENST00000583753 CDC7O00311 574 aa10.53□□□□□ -0.72
RNF43-207ENST00000583753 LSM1O15116 133 aaKnown RBP10.53□□□□□ -0.72
RNF43-207ENST00000583753 ABCB1P08183 1280 aaPredicted RBP10.53□□□□□ -0.72
RNF43-207ENST00000583753 OR1G1P47890 313 aa10.53□□□□□ -0.72
RNF43-207ENST00000583753 POLR2JP52435 117 aaKnown RBP10.53□□□□□ -0.72
RNF43-207ENST00000583753 HK2P52789 917 aa10.53□□□□□ -0.72
RNF43-207ENST00000583753 SH3BP2P78314 561 aa10.53□□□□□ -0.72
RNF43-207ENST00000583753 CREB5Q02930 508 aa10.53□□□□□ -0.72
RNF43-207ENST00000583753 HERC3Q15034 1050 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms