RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 FRG1Q14331 258 aaKnown RBP9.49□□□□□ -0.89
RFFL-210ENST00000582308 ANGPT1Q15389 498 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 LONRF1Q17RB8 773 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 ZDHHC20Q5W0Z9 365 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 FAM151BQ6UXP7 276 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 SLC36A4Q6YBV0 504 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 NLRP8Q86W28 1048 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 PNPLA1Q8N8W4 532 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 TP53I13Q8NBR0 393 aaPredicted RBP9.49□□□□□ -0.89
RFFL-210ENST00000582308 OR6P1Q8NGX9 317 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 OR4L1Q8NH43 312 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 GSDMBQ8TAX9 411 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 GAB3Q8WWW8 586 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 ASB12Q8WXK4 309 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 CENPTQ96BT3 561 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 BIRC7Q96CA5 298 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 AP2M1Q96CW1 435 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 SGSM3Q96HU1 749 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 SPACA7Q96KW9 195 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 TTC25Q96NG3 672 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 AGAP2Q99490 1192 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 ORAI3Q9BRQ5 295 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 FAM126AQ9BYI3 521 aaPredicted RBP9.49□□□□□ -0.89
RFFL-210ENST00000582308 CDH19Q9H159 772 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 PCED1AQ9H1Q7 454 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 FAM96AQ9H5X1 160 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 VPS37BQ9H9H4 285 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 UGT1A7Q9HAW7 530 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 UGT1A10Q9HAW8 530 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 UGT1A8Q9HAW9 530 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 MBNL1Q9NR56 388 aaKnown RBP9.49□□□□□ -0.89
RFFL-210ENST00000582308 RAD18Q9NS91 495 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 C20orf96Q9NUD7 363 aaPredicted RBP9.49□□□□□ -0.89
RFFL-210ENST00000582308 MOCS1Q9NZB8 636 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 MARCH4Q9P2E8 410 aaPredicted RBP9.49□□□□□ -0.89
RFFL-210ENST00000582308 RABGEF1Q9UJ41 708 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 TMPRSS11EQ9UL52 423 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 ZFC3H1O60293 1989 aaKnown RBP9.49□□□□□ -0.89
RFFL-210ENST00000582308 VPS13AQ96RL7 3174 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 CACNA1EQ15878 2313 aa9.49□□□□□ -0.89
RFFL-210ENST00000582308 RALGAPA1Q6GYQ0 2036 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 GLYATL1P3A0A0U1RQE8 302 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 METTL12A8MUP2 240 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 FADS2P1A8MWK0 482 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 CXorf49A8MYA2 514 aaPredicted RBP9.48□□□□□ -0.89
RFFL-210ENST00000582308 MAP3K13O43283 966 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 GALR2O43603 387 aaPredicted RBP9.48□□□□□ -0.89
RFFL-210ENST00000582308 SPAG6O75602 509 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 PIAS1O75925 651 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 SRP72O76094 671 aaKnown RBP9.48□□□□□ -0.89
RFFL-210ENST00000582308 FSBPO95073 299 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 PRAMEF1O95521 474 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 HSD17B3P37058 310 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 RPL6Q02878 288 aaKnown RBP9.48□□□□□ -0.89
RFFL-210ENST00000582308 MGAT5Q09328 741 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 SLC29A2Q14542 456 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 SEMA3AQ14563 771 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 LRRC14Q15048 493 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 IRF4Q15306 451 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 ZNF528Q3MIS6 628 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 MAP9Q49MG5 647 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 ATP13A5Q4VNC0 1218 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 HSP90AA5PQ58FG0 334 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 BEND6Q5SZJ8 279 aaPredicted RBP9.48□□□□□ -0.89
RFFL-210ENST00000582308 NEPROQ6NW34 567 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 PNCKQ6P2M8 343 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 AFTPHQ6ULP2 937 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 KDM7AQ6ZMT4 941 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 CYS1Q717R9 158 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 PTAR1Q7Z6K3 402 aaPredicted RBP9.48□□□□□ -0.89
RFFL-210ENST00000582308 KCNMB4Q86W47 210 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 SLC41A1Q8IVJ1 513 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 PIANPQ8IYJ0 282 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 TMEFF1Q8IYR6 380 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 MREGQ8N565 214 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 TRAM1L1Q8N609 369 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 PLA2G15Q8NCC3 412 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 CADM4Q8NFZ8 388 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 UHMK1Q8TAS1 419 aaKnown RBP9.48□□□□□ -0.89
RFFL-210ENST00000582308 ZNF398Q8TD17 642 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 DTX3LQ8TDB6 740 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 FBF1Q8TES7 1133 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 HNRNPLLQ8WVV9 542 aaKnown RBP9.48□□□□□ -0.89
RFFL-210ENST00000582308 CERS2Q96G23 380 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 LENG8Q96PV6 779 aaPredicted RBP9.48□□□□□ -0.89
RFFL-210ENST00000582308 LRFN3Q9BTN0 628 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 SPATA16Q9BXB7 569 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 FUT8Q9BYC5 575 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 DUSP15Q9H1R2 295 aaPredicted RBP9.48□□□□□ -0.89
RFFL-210ENST00000582308 FZD3Q9NPG1 666 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 SMYD2Q9NRG4 433 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 ZSCAN32Q9NX65 697 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 KCTD5Q9NXV2 234 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 APPL1Q9UKG1 709 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 CNOT6Q9ULM6 557 aaKnown RBP9.48□□□□□ -0.89
RFFL-210ENST00000582308 CA5BQ9Y2D0 317 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.48□□□□□ -0.89
RFFL-210ENST00000582308 SLCO1B1Q9Y6L6 691 aa9.48□□□□□ -0.89
RFFL-210ENST00000582308 LRP4O75096 1905 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms