RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 IPMKQ8NFU5 416 aa13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 PIH1D2Q8WWB5 315 aa13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 SNX19Q92543 992 aa13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 SCRN2Q96FV2 425 aa13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 OXNAD1Q96HP4 312 aaPredicted RBP13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 MCCC1Q96RQ3 725 aaPredicted RBP13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 TRIB3Q96RU7 358 aa13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 UBP1Q9NZI7 540 aa13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 SLC24A2Q9UI40 661 aa13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 PPIL1Q9Y3C6 166 aa13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 GPSM3Q9Y4H4 160 aa13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 IKBKGQ9Y6K9 419 aa13.49□□□□□ -0.25
CSNK1D-220ENST00000581737 A0A0J9YYE9 177 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 CAPN8A6NHC0 703 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 F5H423 210 aaPredicted RBP13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 TP73O15350 636 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 SPINT1O43278 529 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 TRBC1P01850 177 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 FGF1P05230 155 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 IGHV4-34P06331 123 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 APRTP07741 180 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 PDHA1P08559 390 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 ELFN1P0C7U0 828 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 GNSP15586 552 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 ITPKAP23677 461 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 CD27P26842 260 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 PPP2CBP62714 309 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 PPP2CAP67775 309 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 SGCGQ13326 291 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 ARHGEF7Q14155 803 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 IHHQ14623 411 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 RASA2Q15283 850 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 TERF2Q15554 542 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 TMEM259Q4ZIN3 620 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 PROSER1Q86XN7 944 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 TDRPQ86YL5 185 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 SLC41A1Q8IVJ1 513 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 KLHDC8BQ8IXV7 354 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 RGL4Q8IZJ4 473 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 OR2W6PQ8NHA6 318 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 ASB12Q8WXK4 309 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 DNASE2BQ8WZ79 361 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 ARL8AQ96BM9 186 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 BIRC7Q96CA5 298 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 C9orf72Q96LT7 481 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 CAMK1GQ96NX5 476 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 MLPHQ9BV36 600 aaPredicted RBP13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 EPB41L4BQ9H329 900 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 LRRC40Q9H9A6 602 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 KCTD5Q9NXV2 234 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 B4GALT6Q9UBX8 382 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 PILRBQ9UKJ0 227 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 ITM2BQ9Y287 266 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 GCN1Q92616 2671 aaKnown RBP13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 BPTFQ12830 3046 aa13.48□□□□□ -0.25
CSNK1D-220ENST00000581737 LOC285095A0A1B0GVY8 99 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 FAM221BA6H8Z2 402 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 ANKRD66B4E2M5 251 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 C10orf142B7Z368 130 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 GOLGA8MH3BSY2 632 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 PSMD11O00231 422 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 TM7SF2O76062 418 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 ZIC2O95409 532 aaPredicted RBP13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 PRLP01236 227 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 ZNF30P17039 623 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 AKT2P31751 481 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 PPP2R2AP63151 447 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 GALNT3Q14435 633 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 QPCTQ16769 361 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 ZNF284Q2VY69 593 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 PEAR1Q5VY43 1037 aaPredicted RBP13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 ARMC3Q5W041 872 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 KCTD16Q68DU8 428 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 NAPEPLDQ6IQ20 393 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 SLC23A3Q6PIS1 610 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 PRUNE1Q86TP1 453 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 LINC00523Q86TU6 105 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 SYT12Q8IV01 421 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 DENND6BQ8NEG7 585 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 MRGPRX2Q96LB1 330 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 BBC3Q96PG8 261 aaPredicted RBP13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 LYSMD1Q96S90 227 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 CYTH2Q99418 400 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 WRAP53Q9BUR4 548 aaKnown RBP13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 FICDQ9BVA6 458 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 CAPS2Q9BXY5 557 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 ETNK1Q9HBU6 452 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 HACD3Q9P035 362 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 PSMC3IPQ9P2W1 217 aaPredicted RBP13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 LGALS13Q9UHV8 139 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 NOVA2Q9UNW9 492 aaKnown RBP13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 ACTL7BQ9Y614 415 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 CACNA1EQ15878 2313 aa13.47□□□□□ -0.25
CSNK1D-220ENST00000581737 PI4KAP42356 2102 aa13.46□□□□□ -0.25
CSNK1D-220ENST00000581737 LRRK1Q38SD2 2015 aa13.46□□□□□ -0.25
CSNK1D-220ENST00000581737 A0A1W2PPC4 97 aa13.46□□□□□ -0.25
CSNK1D-220ENST00000581737 IGLON5A6NGN9 336 aa13.46□□□□□ -0.25
CSNK1D-220ENST00000581737 NPIPB15A6NHN6 443 aaPredicted RBP13.46□□□□□ -0.25
CSNK1D-220ENST00000581737 SMIM23A6NLE4 172 aa13.46□□□□□ -0.25
CSNK1D-220ENST00000581737 PRAMEF26H0Y7S4 382 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms