RNA–Protein interactions for RNA: ENST00000581733.1

TVP23B-209, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5 BASIC

Gene TVP23B, Length 1,258 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-209ENST00000581733 IL12RB2Q99665 862 aa6.56□□□□□ -1.36
TVP23B-209ENST00000581733 PRMT1Q99873 361 aaKnown RBP6.56□□□□□ -1.36
TVP23B-209ENST00000581733 TCF25Q9BQ70 676 aa6.56□□□□□ -1.36
TVP23B-209ENST00000581733 CAPS2Q9BXY5 557 aa6.56□□□□□ -1.36
TVP23B-209ENST00000581733 SLC39A8Q9C0K1 460 aa6.56□□□□□ -1.36
TVP23B-209ENST00000581733 MAGEH1Q9H213 219 aa6.56□□□□□ -1.36
TVP23B-209ENST00000581733 TRPC7Q9HCX4 862 aa6.56□□□□□ -1.36
TVP23B-209ENST00000581733 ASAH2Q9NR71 780 aa6.56□□□□□ -1.36
TVP23B-209ENST00000581733 BFARQ9NZS9 450 aa6.56□□□□□ -1.36
TVP23B-209ENST00000581733 MPP6Q9NZW5 540 aa6.56□□□□□ -1.36
TVP23B-209ENST00000581733 IPO11Q9UI26 975 aaKnown RBP6.56□□□□□ -1.36
TVP23B-209ENST00000581733 ZMYND8Q9ULU4 1186 aaPredicted RBP6.56□□□□□ -1.36
TVP23B-209ENST00000581733 TRAF6Q9Y4K3 522 aa6.56□□□□□ -1.36
TVP23B-209ENST00000581733 TEX264Q9Y6I9 313 aa6.56□□□□□ -1.36
TVP23B-209ENST00000581733 SCN8AQ9UQD0 1980 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.55□□□□□ -1.36
TVP23B-209ENST00000581733 TRAV19A0A0A6YYK7 116 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 IQANK1A0A1B0GTG1 560 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 A0A1B0GVM2 712 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 TCRBV16S1A1N1A0A5B0 115 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 SDR42E2A6NKP2 422 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 SRRM3A6NNA2 597 aaPredicted RBP6.55□□□□□ -1.36
TVP23B-209ENST00000581733 POC1B-GALNT4F8VUJ3 575 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 TGM5O43548 720 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 NPHS1O60500 1241 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 MAFKO60675 156 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 STC2O76061 302 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 JCHAINP01591 159 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 CKMP06732 381 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 POLBP06746 335 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 RHOCP08134 193 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 INHBAP08476 426 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 POU2F2P09086 479 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 HNRNPA1P09651 372 aaKnown RBP eCLIP6.55□□□□□ -1.36
TVP23B-209ENST00000581733 LINC00271P0C7V0 271 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 IRF1P10914 325 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 PGAM1P18669 254 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 GABRR2P28476 465 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 OR1E1P30953 314 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 HOXA9P31269 272 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 MSH2P43246 934 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 SLCO1A2P46721 670 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 NPY2RP49146 381 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 KCNQ1P51787 676 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 SMAD3P84022 425 aaKnown RBP6.55□□□□□ -1.36
TVP23B-209ENST00000581733 CYP4F8P98187 520 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 GUCY1A3Q02108 690 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 CDH17Q12864 832 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 ZBTB17Q13105 803 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 ZNF177Q13360 481 aaPredicted RBP6.55□□□□□ -1.36
TVP23B-209ENST00000581733 MPP3Q13368 585 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 HNRNPDQ14103 355 aaKnown RBP6.55□□□□□ -1.36
TVP23B-209ENST00000581733 ZNF235Q14590 738 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 FASTKD3Q14CZ7 662 aaKnown RBP6.55□□□□□ -1.36
TVP23B-209ENST00000581733 TMED2Q15363 201 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 TERF2Q15554 542 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 SKIDA1Q1XH10 827 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 SPANXN3Q5MJ09 141 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 LGSNQ5TDP6 509 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 CASC4Q6P4E1 433 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 ZNF449Q6P9G9 518 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 LEKR1Q6ZMV7 388 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 C3orf62Q6ZUJ4 267 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 FGD2Q7Z6J4 655 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 TFAP2DQ7Z6R9 452 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 SETD3Q86TU7 594 aaPredicted RBP6.55□□□□□ -1.36
TVP23B-209ENST00000581733 CAND1Q86VP6 1230 aaKnown RBP6.55□□□□□ -1.36
TVP23B-209ENST00000581733 THNSL2Q86YJ6 484 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 DENND1CQ8IV53 801 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 ZNF683Q8IZ20 524 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 Q8N1Y9 231 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 DNAAF3Q8N9W5 541 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 GABPB2Q8TAK5 448 aaPredicted RBP6.55□□□□□ -1.36
TVP23B-209ENST00000581733 GSDMBQ8TAX9 411 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 DEPDC1BQ8WUY9 529 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 MAML1Q92585 1016 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 ARHGEF2Q92974 986 aaKnown RBP6.55□□□□□ -1.36
TVP23B-209ENST00000581733 HMCESQ96FZ2 354 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 AGAP3Q96P47 875 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 FCRL5Q96RD9 977 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 TGS1Q96RS0 853 aaKnown RBP6.55□□□□□ -1.36
TVP23B-209ENST00000581733 EBNA1BP2Q99848 306 aaKnown RBP6.55□□□□□ -1.36
TVP23B-209ENST00000581733 TBL1YQ9BQ87 522 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 SELENOSQ9BQE4 189 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 GLOD4Q9HC38 313 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 VPS45Q9NRW7 570 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 MAPRE3Q9UPY8 281 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 NR2E3Q9Y5X4 410 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 MAD1L1Q9Y6D9 718 aa6.55□□□□□ -1.36
TVP23B-209ENST00000581733 DENND4AQ7Z401 1863 aa6.54□□□□□ -1.36
TVP23B-209ENST00000581733 ILVBLA1L0T0 632 aa6.54□□□□□ -1.36
TVP23B-209ENST00000581733 MAGEB16A2A368 324 aa6.54□□□□□ -1.36
TVP23B-209ENST00000581733 C2orf78A6NCI8 922 aa6.54□□□□□ -1.36
TVP23B-209ENST00000581733 PRAMEF11O60813 436 aa6.54□□□□□ -1.36
TVP23B-209ENST00000581733 SHOX2O60902 331 aaPredicted RBP6.54□□□□□ -1.36
TVP23B-209ENST00000581733 BANF1O75531 89 aa6.54□□□□□ -1.36
TVP23B-209ENST00000581733 CNTN5O94779 1100 aa6.54□□□□□ -1.36
TVP23B-209ENST00000581733 OLFM2O95897 454 aa6.54□□□□□ -1.36
TVP23B-209ENST00000581733 MYCLP1P12525 358 aaPredicted RBP6.54□□□□□ -1.36
TVP23B-209ENST00000581733 PTPN2P17706 415 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms