RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 MANEALQ5VSG8 457 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 AFMIDQ63HM1 303 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 TRNP1Q6NT89 227 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 ERAP2Q6P179 960 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 C11orf57Q6ZUT1 292 aaPredicted RBP7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 SLC26A9Q7LBE3 791 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 BNIPLQ7Z465 357 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 SYVN1Q86TM6 617 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 KCNMB4Q86W47 210 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 CAMK1DQ8IU85 385 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 RASGRP3Q8IV61 690 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 GLIS1Q8NBF1 620 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 ZNF397Q8NF99 534 aaPredicted RBP7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 SCARF2Q96GP6 870 aaPredicted RBP7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 INTS4Q96HW7 963 aaKnown RBP7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 C9orf72Q96LT7 481 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 TBC1D10AQ9BXI6 508 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 MAGEB5Q9BZ81 275 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 RAB6CQ9H0N0 254 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 NOL6Q9H6R4 1146 aaKnown RBP7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 PPP4R2Q9NY27 417 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 OGFRQ9NZT2 677 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 B3GNT3Q9Y2A9 372 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 SLC17A4Q9Y2C5 497 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 PCYT1BQ9Y5K3 369 aaPredicted RBP7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 COPG1Q9Y678 874 aaKnown RBP7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 FER1L5A0AVI2 2057 aa7.62□□□□□ -1.19
SMARCE1-217ENST00000580654 NBEAL1Q6ZS30 2694 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 SSU72P8A0A1W2PR75 194 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 A8MX80 341 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 F5H423 210 aaPredicted RBP7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 PDE2AO00408 941 aaPredicted RBP7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 BUB1O43683 1085 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 PLEKP08567 350 aaPredicted RBP7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 ELFN1P0C7U0 828 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 BPIP17213 487 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 ETFBP38117 255 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 MAPKAPK2P49137 400 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 SEPHS1P49903 392 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 RHOAP61586 193 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 GCNT1Q02742 428 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 HHEXQ03014 270 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 RAPSNQ13702 412 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 IL11RAQ14626 422 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 PTPN20Q4JDL3 420 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 ANO6Q4KMQ2 910 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 INO80DQ53TQ3 878 aaPredicted RBP7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 FAM69BQ5VUD6 431 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 CDH24Q86UP0 819 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 FJX1Q86VR8 437 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 SMYD4Q8IYR2 804 aaPredicted RBP7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 CBARPQ8N350 705 aaPredicted RBP7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 ITLN2Q8WWU7 325 aaPredicted RBP7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 SEC14L1Q92503 715 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 COQ10AQ96MF6 247 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 NSMCE3Q96MG7 304 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 GPR87Q9BY21 358 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 MAGEH1Q9H213 219 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 SARS2Q9NP81 518 aaKnown RBP7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 LATS2Q9NRM7 1088 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 PHPT1Q9NRX4 125 aaPredicted RBP7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 TMEM248Q9NWD8 314 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 GPR83Q9NYM4 423 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 KLF2Q9Y5W3 355 aaPredicted RBP7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 PIKFYVEQ9Y2I7 2098 aa7.61□□□□□ -1.19
SMARCE1-217ENST00000580654 BECN2A8MW95 431 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 FAM72CH0Y354 149 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 PMM2O15305 246 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 SLC16A3O15427 465 aaKnown RBP7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 THAP12O43422 761 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 MED7O43513 233 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 TMEM63AO94886 807 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 NADKO95544 446 aaPredicted RBP7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 F9P00740 461 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 MT-ND3P03897 115 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 STSP08842 583 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 KRT5P13647 590 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 RHOQP17081 205 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 ERCC5P28715 1186 aaPredicted RBP7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 GNA15P30679 374 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 CA5AP35218 305 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 RGRP47804 291 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 PMS1P54277 932 aaKnown RBP7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 EPHA4P54764 986 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 PEX6Q13608 980 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 ACOX1Q15067 660 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 PYCR3Q53H96 274 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 ACBD5Q5T8D3 534 aaPredicted RBP7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 FAM72AQ5TYM5 149 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 FAM72DQ6L9T8 149 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 PWWP2BQ6NUJ5 590 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 BRAT1Q6PJG6 821 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 DPPA4Q7L190 304 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 CUZD1Q86UP6 607 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 FAM72BQ86X60 149 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 FAM131BQ86XD5 332 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 DNAAF5Q86Y56 855 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 PASD1Q8IV76 773 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms