RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, human

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NDEL1-208	ENST00000580237	HERPUD2	Q9BSE4	406 aa		10.85	□□□□□ -0.67
NDEL1-208	ENST00000580237	BOC	Q9BWV1	1114 aa		10.85	□□□□□ -0.67
NDEL1-208	ENST00000580237	SPATA16	Q9BXB7	569 aa		10.85	□□□□□ -0.67
NDEL1-208	ENST00000580237	GSDMC	Q9BYG8	508 aa		10.85	□□□□□ -0.67
NDEL1-208	ENST00000580237	FRMD8	Q9BZ67	464 aa	Predicted RBP	10.85	□□□□□ -0.67
NDEL1-208	ENST00000580237	TMEM168	Q9H0V1	697 aa		10.85	□□□□□ -0.67
NDEL1-208	ENST00000580237	GBA3	Q9H227	469 aa		10.85	□□□□□ -0.67
NDEL1-208	ENST00000580237	DPEP2	Q9H4A9	486 aa		10.85	□□□□□ -0.67
NDEL1-208	ENST00000580237	FAM83D	Q9H4H8	585 aa		10.85	□□□□□ -0.67
NDEL1-208	ENST00000580237	CCDC86	Q9H6F5	360 aa	Known RBP	10.85	□□□□□ -0.67
NDEL1-208	ENST00000580237	C10orf88	Q9H8K7	445 aa		10.85	□□□□□ -0.67
NDEL1-208	ENST00000580237	LZTFL1	Q9NQ48	299 aa		10.85	□□□□□ -0.67
NDEL1-208	ENST00000580237	RAD18	Q9NS91	495 aa		10.85	□□□□□ -0.67
NDEL1-208	ENST00000580237	SUFU	Q9UMX1	484 aa		10.85	□□□□□ -0.67
NDEL1-208	ENST00000580237	KIF26B	Q2KJY2	2108 aa		10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	LY6G6E	A0A0G2JKS1	128 aa		10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	RGSL1	A5PLK6	1076 aa		10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	FAM221B	A6H8Z2	402 aa		10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	OPA1	O60313	960 aa		10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	CD68	P34810	354 aa	Predicted RBP	10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	GEM	P55040	296 aa		10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	INSM1	Q01101	510 aa	Predicted RBP	10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	SLC30A9	Q6PML9	568 aa		10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	ARHGEF18	Q6ZSZ5	1173 aa		10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	GLT6D1	Q7Z4J2	308 aa		10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	GALNT13	Q8IUC8	556 aa		10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	RAVER1	Q8IY67	606 aa	Known RBP	10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	PDCD7	Q8N8D1	485 aa	Known RBP	10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	BLOC1S5	Q8TDH9	187 aa		10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	PPP1R2P1	Q96PQ5	205 aa		10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	FCRL5	Q96RD9	977 aa		10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	FICD	Q9BVA6	458 aa		10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	GRPEL1	Q9HAV7	217 aa		10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	MAGEE1	Q9HCI5	957 aa		10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	PADI4	Q9UM07	663 aa		10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	TMEM98	Q9Y2Y6	226 aa		10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	GPSM3	Q9Y4H4	160 aa		10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237		U3KQA8	63 aa		10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	EPG5	Q9HCE0	2579 aa		10.84	□□□□□ -0.67
NDEL1-208	ENST00000580237	APC2	O95996	2303 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	EME2	A4GXA9	379 aa	Predicted RBP	10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	GOLGA6L3	A6NEY3	463 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	DDX3Y	O15523	660 aa	Known RBP	10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	MT-CO3	P00414	261 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	SOD1	P00441	154 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	FGF1	P05230	155 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	CEACAM5	P06731	702 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	IVL	P07476	585 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	HLA-DPA1	P20036	260 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	PSMB4	P28070	264 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	CHRNA4	P43681	627 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	POLD2	P49005	469 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	DCDC1	P59894	354 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	TARDBP	Q13148	414 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	PEX6	Q13608	980 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	SPIDR	Q14159	915 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	SIRPB2	Q5JXA9	342 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	HENMT1	Q5T8I9	393 aa	Known RBP	10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	KDELC1	Q6UW63	502 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	PHYKPL	Q8IUZ5	450 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	LRRC8A	Q8IWT6	810 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	CBARP	Q8N350	705 aa	Predicted RBP	10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	CCL4L1	Q8NHW4	92 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	CCDC110	Q8TBZ0	833 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	ANP32B	Q92688	251 aa	Known RBP	10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	CCDC74A	Q96AQ1	378 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	TADA1	Q96BN2	335 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	OXNAD1	Q96HP4	312 aa	Predicted RBP	10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	HES6	Q96HZ4	224 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	SPATA13	Q96N96	652 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	AGAP2	Q99490	1192 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	CCDC3	Q9BQI4	270 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	ZSCAN5A	Q9BUG6	496 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	ZMYND15	Q9H091	742 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	TRNAU1AP	Q9NX07	287 aa	Known RBP	10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	HACD3	Q9P035	362 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	ZMIZ1	Q9ULJ6	1067 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	SLC17A4	Q9Y2C5	497 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	AAR2	Q9Y312	384 aa	Known RBP	10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	AK5	Q9Y6K8	562 aa		10.83	□□□□□ -0.68
NDEL1-208	ENST00000580237	TRABD2B	A6NFA1	517 aa		10.82	□□□□□ -0.68
NDEL1-208	ENST00000580237	FADS2P1	A8MWK0	482 aa		10.82	□□□□□ -0.68
NDEL1-208	ENST00000580237	CS	O75390	466 aa	Known RBP	10.82	□□□□□ -0.68
NDEL1-208	ENST00000580237	ATP1A1	P05023	1023 aa	Known RBP	10.82	□□□□□ -0.68
NDEL1-208	ENST00000580237	ACTR1B	P42025	376 aa		10.82	□□□□□ -0.68
NDEL1-208	ENST00000580237	PPM1F	P49593	454 aa	Predicted RBP	10.82	□□□□□ -0.68
NDEL1-208	ENST00000580237	ACTR1A	P61163	376 aa		10.82	□□□□□ -0.68
NDEL1-208	ENST00000580237	RPS6KA1	Q15418	735 aa		10.82	□□□□□ -0.68
NDEL1-208	ENST00000580237	SLC1A5	Q15758	541 aa		10.82	□□□□□ -0.68
NDEL1-208	ENST00000580237	C14orf28	Q4W4Y0	310 aa		10.82	□□□□□ -0.68
NDEL1-208	ENST00000580237	ANKRD20A2	Q5SQ80	823 aa		10.82	□□□□□ -0.68
NDEL1-208	ENST00000580237	PERM1	Q5SV97	790 aa		10.82	□□□□□ -0.68
NDEL1-208	ENST00000580237	ANKRD20A1	Q5TYW2	823 aa		10.82	□□□□□ -0.68
NDEL1-208	ENST00000580237	ANKRD20A3	Q5VUR7	823 aa		10.82	□□□□□ -0.68
NDEL1-208	ENST00000580237	RBM44	Q6ZP01	1051 aa	Known RBP	10.82	□□□□□ -0.68
NDEL1-208	ENST00000580237	NLRP8	Q86W28	1048 aa		10.82	□□□□□ -0.68
NDEL1-208	ENST00000580237	TRAM1L1	Q8N609	369 aa		10.82	□□□□□ -0.68
NDEL1-208	ENST00000580237	DCBLD1	Q8N8Z6	715 aa		10.82	□□□□□ -0.68
NDEL1-208	ENST00000580237	OR6C4	Q8NGE1	309 aa		10.82	□□□□□ -0.68

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