RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 SPATA13Q96N96 652 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 FCRL5Q96RD9 977 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 TUBGCP5Q96RT8 1024 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 LYSMD1Q96S90 227 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 VAT1Q99536 393 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 KLF6Q99612 283 aaPredicted RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 NAPGQ99747 312 aaPredicted RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 SEMA3CQ99985 751 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 HEPHQ9BQS7 1158 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 TMEM121Q9BTD3 319 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 HDAC8Q9BY41 377 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 FRMD8P1Q9BZ68 369 aaPredicted RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 SLC25A51Q9H1U9 297 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 GBA3Q9H227 469 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 NEUROG2Q9H2A3 272 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 SP110Q9HB58 689 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 GLOD4Q9HC38 313 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 GCM1Q9NP62 436 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 NT5MQ9NPB1 228 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 RBM22Q9NW64 420 aaKnown RBP eCLIP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 ZSCAN32Q9NX65 697 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 DONSONQ9NYP3 566 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 SLAMF8Q9P0V8 285 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 HECAQ9UBI9 543 aaPredicted RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 IL36AQ9UHA7 158 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 FZD4Q9ULV1 537 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 PLA2G4CQ9UP65 541 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 SLC8A2Q9UPR5 921 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 ZFR2Q9UPR6 939 aaKnown RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 ITM2BQ9Y287 266 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 DRG1Q9Y295 367 aaKnown RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 PCDHGA2Q9Y5H1 932 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 SPO11Q9Y5K1 396 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 FADS3Q9Y5Q0 445 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 R4GN57 208 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 PCM1Q15154 2024 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 ZFHX2Q9C0A1 2572 aaPredicted RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 SPEGQ15772 3267 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 KIF26BQ2KJY2 2108 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 A0A0J9YYE9 177 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 A0A0U1RQS6 177 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 A0A1W2PR77 199 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 TCRBV7S3A2A0A539 114 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 NPIPB15A6NHN6 443 aaPredicted RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 SLC22A31A6NKX4 558 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 C16orf96A6NNT2 1141 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 UPK3BL1B0FP48 263 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 UPK3BL2E5RIL1 263 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 K7ESM1 405 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 PGRMC1O00264 195 aaKnown RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 KRIT1O00522 736 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 GAPDHSO14556 408 aaPredicted RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 RAD51BO15315 384 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 KCNN4O15554 427 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 NRDCO43847 1150 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 ZNF500O60304 480 aaPredicted RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 PHF2O75151 1096 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 SUN1O94901 812 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 POP4O95707 220 aaKnown RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 IGSF6O95976 241 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 B3GALT4O96024 378 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 SOD1P00441 154 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 TRBC1P01850 177 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 HPXP02790 462 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 WNT1P04628 370 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 PRKCGP05129 697 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 UGT2B4P06133 528 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 C1SP09871 688 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 ZSCAN5DPP0CG00 497 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 ADRB3P13945 408 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 PI3P19957 117 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 PSMB4P28070 264 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 CD6P30203 668 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 CA5AP35218 305 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 RPL22P35268 128 aaKnown RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 COILP38432 576 aaPredicted RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 PTGER3P43115 390 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 MAGEA3P43357 314 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 KCNJ1P48048 391 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 RENBPP51606 427 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 NEK3P51956 506 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 NHLH1Q02575 133 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 AP1B1Q10567 949 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 SEMA5AQ13591 1074 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 BYSLQ13895 437 aaKnown RBP3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 ZNF235Q14590 738 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 KCNJ11Q14654 390 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 STARD3Q14849 445 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 E2F5Q15329 346 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 UGP2Q16851 508 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 ZNF284Q2VY69 593 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 P3H1Q32P28 736 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 POM121L1PQ3SYA9 428 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 ACCSLQ4AC99 568 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 TMEM52BQ4KMG9 183 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 LRRC73Q5JTD7 316 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 ANKRD20A2Q5SQ80 823 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 TPRG1LQ5T0D9 272 aa3.8□□□□□ -1.8
SMARCE1-215ENST00000578995 SEL1L2Q5TEA6 688 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms