RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 TNNT1P13805 278 aa17.44■□□□□ 0.38
SLC9A3R1-203ENST00000578958 ZFXP17010 805 aaPredicted RBP17.44■□□□□ 0.38
SLC9A3R1-203ENST00000578958 ARHGAP25P42331 645 aa17.44■□□□□ 0.38
SLC9A3R1-203ENST00000578958 SKOR1P84550 965 aa17.44■□□□□ 0.38
SLC9A3R1-203ENST00000578958 ZFP36L1Q07352 338 aaKnown RBP17.44■□□□□ 0.38
SLC9A3R1-203ENST00000578958 NIPAL4Q0D2K0 466 aa17.44■□□□□ 0.38
SLC9A3R1-203ENST00000578958 CLN3Q13286 438 aa17.44■□□□□ 0.38
SLC9A3R1-203ENST00000578958 TMEM164Q5U3C3 297 aa17.44■□□□□ 0.38
SLC9A3R1-203ENST00000578958 USP53Q70EK8 1073 aa17.44■□□□□ 0.38
SLC9A3R1-203ENST00000578958 TRIM74Q86UV6 250 aa17.44■□□□□ 0.38
SLC9A3R1-203ENST00000578958 RHOT2Q8IXI1 618 aa17.44■□□□□ 0.38
SLC9A3R1-203ENST00000578958 CCNL2Q96S94 520 aaPredicted RBP17.44■□□□□ 0.38
SLC9A3R1-203ENST00000578958 TSPY26PQ9H489 355 aa17.44■□□□□ 0.38
SLC9A3R1-203ENST00000578958 NHEJ1Q9H9Q4 299 aaPredicted RBP17.44■□□□□ 0.38
SLC9A3R1-203ENST00000578958 RDH14Q9HBH5 336 aa17.44■□□□□ 0.38
SLC9A3R1-203ENST00000578958 ABHD10Q9NUJ1 306 aa17.44■□□□□ 0.38
SLC9A3R1-203ENST00000578958 SEPT10Q9P0V9 454 aa17.44■□□□□ 0.38
SLC9A3R1-203ENST00000578958 ZNHIT2Q9UHR6 403 aa17.44■□□□□ 0.38
SLC9A3R1-203ENST00000578958 PCDHB11Q9Y5F2 797 aa17.44■□□□□ 0.38
SLC9A3R1-203ENST00000578958 COL27A1Q8IZC6 1860 aaPredicted RBP17.44■□□□□ 0.38
SLC9A3R1-203ENST00000578958 BAHCC1Q9P281 2608 aa17.43■□□□□ 0.38
SLC9A3R1-203ENST00000578958 PPP1R12AO14974 1030 aaPredicted RBP17.43■□□□□ 0.38
SLC9A3R1-203ENST00000578958 KRT1P04264 644 aa17.43■□□□□ 0.38
SLC9A3R1-203ENST00000578958 GPR3P46089 330 aa17.43■□□□□ 0.38
SLC9A3R1-203ENST00000578958 B4GALNT1Q00973 533 aa17.43■□□□□ 0.38
SLC9A3R1-203ENST00000578958 SLC10A2Q12908 348 aaPredicted RBP17.43■□□□□ 0.38
SLC9A3R1-203ENST00000578958 LRP8Q14114 963 aa17.43■□□□□ 0.38
SLC9A3R1-203ENST00000578958 PDK1Q15118 436 aa17.43■□□□□ 0.38
SLC9A3R1-203ENST00000578958 ASTE1Q2TB18 679 aaPredicted RBP17.43■□□□□ 0.38
SLC9A3R1-203ENST00000578958 RFX6Q8HWS3 928 aa17.43■□□□□ 0.38
SLC9A3R1-203ENST00000578958 RAVER1Q8IY67 606 aaKnown RBP17.43■□□□□ 0.38
SLC9A3R1-203ENST00000578958 ARRDC2Q8TBH0 407 aa17.43■□□□□ 0.38
SLC9A3R1-203ENST00000578958 PTCD2Q8WV60 388 aaKnown RBP17.43■□□□□ 0.38
SLC9A3R1-203ENST00000578958 AHCYL2Q96HN2 611 aaKnown RBP17.43■□□□□ 0.38
SLC9A3R1-203ENST00000578958 SEMA6CQ9H3T2 930 aa17.43■□□□□ 0.38
SLC9A3R1-203ENST00000578958 SPTLC3Q9NUV7 552 aa17.43■□□□□ 0.38
SLC9A3R1-203ENST00000578958 KIF26BQ2KJY2 2108 aa17.42■□□□□ 0.38
SLC9A3R1-203ENST00000578958 ANKRD66B4E2M5 251 aa17.42■□□□□ 0.38
SLC9A3R1-203ENST00000578958 K7ENP7 123 aa17.42■□□□□ 0.38
SLC9A3R1-203ENST00000578958 NVLO15381 856 aaKnown RBP17.42■□□□□ 0.38
SLC9A3R1-203ENST00000578958 B4GAT1O43505 415 aa17.42■□□□□ 0.38
SLC9A3R1-203ENST00000578958 SOD1P00441 154 aa17.42■□□□□ 0.38
SLC9A3R1-203ENST00000578958 ITIH1P19827 911 aa17.42■□□□□ 0.38
SLC9A3R1-203ENST00000578958 CFHR1Q03591 330 aa17.42■□□□□ 0.38
SLC9A3R1-203ENST00000578958 PPIDQ08752 370 aaKnown RBP17.42■□□□□ 0.38
SLC9A3R1-203ENST00000578958 CLPPQ16740 277 aaPredicted RBP17.42■□□□□ 0.38
SLC9A3R1-203ENST00000578958 PYCR3Q53H96 274 aa17.42■□□□□ 0.38
SLC9A3R1-203ENST00000578958 CCDC70Q6NSX1 233 aa17.42■□□□□ 0.38
SLC9A3R1-203ENST00000578958 INO80CQ6PI98 192 aaPredicted RBP17.42■□□□□ 0.38
SLC9A3R1-203ENST00000578958 VSTM4Q8IW00 320 aa17.42■□□□□ 0.38
SLC9A3R1-203ENST00000578958 PATE1Q8WXA2 126 aa17.42■□□□□ 0.38
SLC9A3R1-203ENST00000578958 AGAP2Q99490 1192 aa17.42■□□□□ 0.38
SLC9A3R1-203ENST00000578958 SLC38A3Q99624 504 aa17.42■□□□□ 0.38
SLC9A3R1-203ENST00000578958 CHP1Q99653 195 aa17.42■□□□□ 0.38
SLC9A3R1-203ENST00000578958 FAM83DQ9H4H8 585 aa17.42■□□□□ 0.38
SLC9A3R1-203ENST00000578958 STN1Q9H668 368 aaKnown RBP17.42■□□□□ 0.38
SLC9A3R1-203ENST00000578958 KCNK4Q9NYG8 393 aa17.42■□□□□ 0.38
SLC9A3R1-203ENST00000578958 PLEKHM1Q9Y4G2 1056 aa17.42■□□□□ 0.38
SLC9A3R1-203ENST00000578958 UNC13CQ8NB66 2214 aa17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 TRBV23OR9-2A0A075B6M9 112 aa17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 RGSL1A5PLK6 1076 aa17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 SPOPO43791 374 aa17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 MFAP3LO75121 409 aa17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 PRLP01236 227 aa17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 SLC1A1P43005 524 aa17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 SPINT3P49223 89 aa17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 DYNLT1P63172 113 aa17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 IFI35P80217 286 aaPredicted RBP17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 QPCTQ16769 361 aa17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 CHST15Q7LFX5 561 aaPredicted RBP17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 KDELC2Q7Z4H8 507 aa17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 ZNF438Q7Z4V0 828 aa17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 NT5DC3Q86UY8 548 aa17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 C17orf82Q86X59 251 aaPredicted RBP17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 CNGA4Q8IV77 575 aa17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 SLITRK4Q8IW52 837 aa17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 RHOT1Q8IXI2 618 aa17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 NAGSQ8N159 534 aa17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 RNF214Q8ND24 703 aa17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 USP7Q93009 1102 aa17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 RNF25Q96BH1 459 aaPredicted RBP17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 SCARF2Q96GP6 870 aaPredicted RBP17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 AGAP3Q96P47 875 aa17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 LYSMD1Q96S90 227 aa17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 NUDT22Q9BRQ3 303 aa17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 DDX56Q9NY93 547 aaKnown RBP17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 FASNP49327 2511 aaKnown RBP17.41■□□□□ 0.38
SLC9A3R1-203ENST00000578958 PRAMEF33A0A0G2JMD5 474 aa17.4■□□□□ 0.38
SLC9A3R1-203ENST00000578958 ZNF487B1APH4 448 aa17.4■□□□□ 0.38
SLC9A3R1-203ENST00000578958 PRAMEF10O60809 474 aa17.4■□□□□ 0.38
SLC9A3R1-203ENST00000578958 SLC4A1P02730 911 aa17.4■□□□□ 0.38
SLC9A3R1-203ENST00000578958 ATP1A1P05023 1023 aaKnown RBP17.4■□□□□ 0.38
SLC9A3R1-203ENST00000578958 LIPCP11150 499 aa17.4■□□□□ 0.38
SLC9A3R1-203ENST00000578958 TNNT3P45378 269 aaPredicted RBP17.4■□□□□ 0.38
SLC9A3R1-203ENST00000578958 ZBTB17Q13105 803 aa17.4■□□□□ 0.38
SLC9A3R1-203ENST00000578958 GALNT3Q14435 633 aa17.4■□□□□ 0.38
SLC9A3R1-203ENST00000578958 IHHQ14623 411 aa17.4■□□□□ 0.38
SLC9A3R1-203ENST00000578958 NR1D2Q14995 579 aa17.4■□□□□ 0.38
SLC9A3R1-203ENST00000578958 PCSK7Q16549 785 aa17.4■□□□□ 0.38
SLC9A3R1-203ENST00000578958 MANEAQ5SRI9 462 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms