RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 HIF1AQ16665 826 aa10.95□□□□□ -0.66
GGA3-206ENST00000578773 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.95□□□□□ -0.66
GGA3-206ENST00000578773 BRMS1LQ5PSV4 323 aa10.95□□□□□ -0.66
GGA3-206ENST00000578773 FAM72AQ5TYM5 149 aa10.95□□□□□ -0.66
GGA3-206ENST00000578773 PRAMEF17Q5VTA0 474 aa10.95□□□□□ -0.66
GGA3-206ENST00000578773 FAM72DQ6L9T8 149 aa10.95□□□□□ -0.66
GGA3-206ENST00000578773 ERAP2Q6P179 960 aa10.95□□□□□ -0.66
GGA3-206ENST00000578773 FAM72BQ86X60 149 aa10.95□□□□□ -0.66
GGA3-206ENST00000578773 PPP1R3BQ86XI6 285 aa10.95□□□□□ -0.66
GGA3-206ENST00000578773 TGIF2LYQ8IUE0 185 aa10.95□□□□□ -0.66
GGA3-206ENST00000578773 ENDOVQ8N8Q3 282 aaKnown RBP10.95□□□□□ -0.66
GGA3-206ENST00000578773 STK32AQ8WU08 396 aa10.95□□□□□ -0.66
GGA3-206ENST00000578773 RELTQ969Z4 430 aa10.95□□□□□ -0.66
GGA3-206ENST00000578773 NUS1Q96E22 293 aa10.95□□□□□ -0.66
GGA3-206ENST00000578773 PAGE5Q96GU1 130 aa10.95□□□□□ -0.66
GGA3-206ENST00000578773 COQ10AQ96MF6 247 aa10.95□□□□□ -0.66
GGA3-206ENST00000578773 TRAPPC9Q96Q05 1148 aa10.95□□□□□ -0.66
GGA3-206ENST00000578773 NCAPGQ9BPX3 1015 aa10.95□□□□□ -0.66
GGA3-206ENST00000578773 GPR87Q9BY21 358 aa10.95□□□□□ -0.66
GGA3-206ENST00000578773 ZNF552Q9H707 407 aaPredicted RBP10.95□□□□□ -0.66
GGA3-206ENST00000578773 MAGEF1Q9HAY2 307 aa10.95□□□□□ -0.66
GGA3-206ENST00000578773 CHST11Q9NPF2 352 aa10.95□□□□□ -0.66
GGA3-206ENST00000578773 DLL4Q9NR61 685 aa10.95□□□□□ -0.66
GGA3-206ENST00000578773 PHPT1Q9NRX4 125 aaPredicted RBP10.95□□□□□ -0.66
GGA3-206ENST00000578773 AGPAT4Q9NRZ5 378 aa10.95□□□□□ -0.66
GGA3-206ENST00000578773 NOVA2Q9UNW9 492 aaKnown RBP10.95□□□□□ -0.66
GGA3-206ENST00000578773 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.95□□□□□ -0.66
GGA3-206ENST00000578773 A0A1B0GUH1 482 aa10.94□□□□□ -0.66
GGA3-206ENST00000578773 THAP12O43422 761 aa10.94□□□□□ -0.66
GGA3-206ENST00000578773 LETM1O95202 739 aaPredicted RBP10.94□□□□□ -0.66
GGA3-206ENST00000578773 SOD1P00441 154 aa10.94□□□□□ -0.66
GGA3-206ENST00000578773 CAPN3P20807 821 aa10.94□□□□□ -0.66
GGA3-206ENST00000578773 FOXD4Q12950 439 aaPredicted RBP10.94□□□□□ -0.66
GGA3-206ENST00000578773 PYCR3Q53H96 274 aa10.94□□□□□ -0.66
GGA3-206ENST00000578773 LYPLAL1Q5VWZ2 237 aa10.94□□□□□ -0.66
GGA3-206ENST00000578773 AFMIDQ63HM1 303 aa10.94□□□□□ -0.66
GGA3-206ENST00000578773 DENND2CQ68D51 928 aa10.94□□□□□ -0.66
GGA3-206ENST00000578773 PLEKHA7Q6IQ23 1121 aa10.94□□□□□ -0.66
GGA3-206ENST00000578773 SPOCD1Q6ZMY3 1216 aa10.94□□□□□ -0.66
GGA3-206ENST00000578773 FAM92BQ6ZTR7 304 aa10.94□□□□□ -0.66
GGA3-206ENST00000578773 ARFGAP1Q8N6T3 406 aa10.94□□□□□ -0.66
GGA3-206ENST00000578773 RSC1A1Q92681 617 aa10.94□□□□□ -0.66
GGA3-206ENST00000578773 MR1Q95460 341 aa10.94□□□□□ -0.66
GGA3-206ENST00000578773 TMEM121Q9BTD3 319 aa10.94□□□□□ -0.66
GGA3-206ENST00000578773 SCAND2PQ9GZW5 306 aaPredicted RBP10.94□□□□□ -0.66
GGA3-206ENST00000578773 MCCC2Q9HCC0 563 aa10.94□□□□□ -0.66
GGA3-206ENST00000578773 SARS2Q9NP81 518 aaKnown RBP10.94□□□□□ -0.66
GGA3-206ENST00000578773 ASNSD1Q9NWL6 643 aa10.94□□□□□ -0.66
GGA3-206ENST00000578773 C5AR2Q9P296 337 aa10.94□□□□□ -0.66
GGA3-206ENST00000578773 SH3BGRL2Q9UJC5 107 aa10.94□□□□□ -0.66
GGA3-206ENST00000578773 KCNK6Q9Y257 313 aa10.94□□□□□ -0.66
GGA3-206ENST00000578773 RPH3AQ9Y2J0 694 aaPredicted RBP10.94□□□□□ -0.66
GGA3-206ENST00000578773 CCDC78A2IDD5 438 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 GOLGA6CA6NDK9 693 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 GOLGA6BA6NDN3 693 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 KDELR3O43731 214 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 RASSF9O75901 435 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 MT-ND3P03897 115 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 CAPN1P07384 714 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 GLI1P08151 1106 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 EBLN1P0CF75 366 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 GOLGA6DP0CG33 693 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 FECHP22830 423 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 ETV3P41162 512 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 SUOXP51687 545 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 VAV2P52735 878 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 FOXL2P58012 376 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 ADORA2A-AS1P86434 159 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 DEUP1Q05D60 604 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 RAD51Q06609 339 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 ZNF235Q14590 738 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 CNGA3Q16281 694 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 SKOR2Q2VWA4 1001 aaPredicted RBP10.93□□□□□ -0.66
GGA3-206ENST00000578773 MANEALQ5VSG8 457 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 IGFL3Q6UXB1 125 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 DPPA4Q7L190 304 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 HSD11B1LQ7Z5J1 315 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 FAM131BQ86XD5 332 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 SMYD4Q8IYR2 804 aaPredicted RBP10.93□□□□□ -0.66
GGA3-206ENST00000578773 ZNF808Q8N4W9 903 aaPredicted RBP10.93□□□□□ -0.66
GGA3-206ENST00000578773 LMO3Q8TAP4 145 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 FAR1Q8WVX9 515 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 C14orf79Q96F83 325 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 SCARF2Q96GP6 870 aaPredicted RBP10.93□□□□□ -0.66
GGA3-206ENST00000578773 C1orf74Q96LT6 269 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 SLX1AQ9BQ83 275 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 GOLGA6AQ9NYA3 693 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 SCHIP1Q9P0W5 487 aaPredicted RBP10.93□□□□□ -0.66
GGA3-206ENST00000578773 B4GALT6Q9UBX8 382 aa10.93□□□□□ -0.66
GGA3-206ENST00000578773 DDX3YO15523 660 aaKnown RBP10.92□□□□□ -0.66
GGA3-206ENST00000578773 GRID2O43424 1007 aa10.92□□□□□ -0.66
GGA3-206ENST00000578773 SNX2O60749 519 aa10.92□□□□□ -0.66
GGA3-206ENST00000578773 CUTAO60888 179 aa10.92□□□□□ -0.66
GGA3-206ENST00000578773 RHOBTB3O94955 611 aa10.92□□□□□ -0.66
GGA3-206ENST00000578773 KRT5P13647 590 aa10.92□□□□□ -0.66
GGA3-206ENST00000578773 ERCC5P28715 1186 aaPredicted RBP10.92□□□□□ -0.66
GGA3-206ENST00000578773 EPHA4P54764 986 aa10.92□□□□□ -0.66
GGA3-206ENST00000578773 TUBB3Q13509 450 aa10.92□□□□□ -0.66
GGA3-206ENST00000578773 PTPN20Q4JDL3 420 aa10.92□□□□□ -0.66
GGA3-206ENST00000578773 RAET1GQ6H3X3 334 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms