RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 LOXL4Q96JB6 756 aa11.23□□□□□ -0.61
CDK5RAP3-210ENST00000578733 SERAC1Q96JX3 654 aa11.23□□□□□ -0.61
CDK5RAP3-210ENST00000578733 DNAJC1Q96KC8 554 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-210ENST00000578733 SIGLEC10Q96LC7 697 aa11.23□□□□□ -0.61
CDK5RAP3-210ENST00000578733 TTC25Q96NG3 672 aa11.23□□□□□ -0.61
CDK5RAP3-210ENST00000578733 ABCG8Q9H221 673 aa11.23□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CHRAC1Q9NRG0 131 aa11.23□□□□□ -0.61
CDK5RAP3-210ENST00000578733 AASDHPPTQ9NRN7 309 aa11.23□□□□□ -0.61
CDK5RAP3-210ENST00000578733 PHPT1Q9NRX4 125 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-210ENST00000578733 ZDHHC18Q9NUE0 388 aa11.23□□□□□ -0.61
CDK5RAP3-210ENST00000578733 ZC3H7BQ9UGR2 993 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CD84Q9UIB8 345 aa11.23□□□□□ -0.61
CDK5RAP3-210ENST00000578733 NFU1Q9UMS0 254 aa11.23□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CHMP2BQ9UQN3 213 aa11.23□□□□□ -0.61
CDK5RAP3-210ENST00000578733 FNDC3AQ9Y2H6 1198 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-210ENST00000578733 TMEM131Q92545 1883 aa11.23□□□□□ -0.61
CDK5RAP3-210ENST00000578733 LRP4O75096 1905 aa11.23□□□□□ -0.61
CDK5RAP3-210ENST00000578733 SDK1Q7Z5N4 2213 aa11.23□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CACNB4O00305 520 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CTIFO43310 598 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 BUD23O43709 281 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 PRAMEF1O95521 474 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 KELP23276 732 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 HTR1BP28222 390 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 MC4RP32245 332 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 PHBP35232 272 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 HOXD12P35452 270 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 ELK3P41970 407 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 RABIFP47224 123 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 RACK1P63244 317 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CRADDP78560 199 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 EP300Q09472 2414 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 OVGP1Q12889 678 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 SRSF5Q13243 272 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 THOC5Q13769 683 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 IRF4Q15306 451 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 TEAD4Q15561 434 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CACNA1EQ15878 2313 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 LONRF1Q17RB8 773 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 ERCC6LQ2NKX8 1250 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 MAP9Q49MG5 647 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 GPR33Q49SQ1 333 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 FASTKD1Q53R41 847 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 HENMT1Q5T8I9 393 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 LYPLAL1Q5VWZ2 237 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 KIAA0930Q6ICG6 404 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 WDR93Q6P2C0 686 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 FAM151BQ6UXP7 276 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 KYAT3Q6YP21 454 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 SNX20Q7Z614 316 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 IQCHQ86VS3 1027 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 DCP2Q8IU60 420 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 SLC41A1Q8IVJ1 513 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 LMNTD2Q8IXW0 634 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 MPP5Q8N3R9 675 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 DEFB119Q8N690 84 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 OTUD6BQ8N6M0 293 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 TP53I13Q8NBR0 393 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 OR13C4Q8NGS5 318 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 HEXDCQ8WVB3 486 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 DNASE2BQ8WZ79 361 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CFAP36Q96G28 342 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CDKN2AIPNLQ96HQ2 116 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 RIOK2Q9BVS4 552 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 ZCCHC2Q9C0B9 1178 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 EPC1Q9H2F5 836 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 ASB8Q9H765 288 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 WDR26Q9H7D7 661 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 ANKZF1Q9H8Y5 726 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 ADAMTS9Q9P2N4 1935 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 EIF2B4Q9UI10 523 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 FKBPLQ9UIM3 349 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CRLS1Q9UJA2 301 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 TEX264Q9Y6I9 313 aa11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 V9GYY5 206 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-210ENST00000578733 KMT2BQ9UMN6 2715 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP3-210ENST00000578733 A0A1B0GTW7 788 aa11.21□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CCDC78A2IDD5 438 aa11.21□□□□□ -0.61
CDK5RAP3-210ENST00000578733 GOLGA8CPA6NN73 597 aa11.21□□□□□ -0.61
CDK5RAP3-210ENST00000578733 C10orf142B7Z368 130 aa11.21□□□□□ -0.61
CDK5RAP3-210ENST00000578733 F8W8V4 182 aa11.21□□□□□ -0.61
CDK5RAP3-210ENST00000578733 SRP72O76094 671 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-210ENST00000578733 RALBP11234 206 aa11.21□□□□□ -0.61
CDK5RAP3-210ENST00000578733 PSMA3P25788 255 aa11.21□□□□□ -0.61
CDK5RAP3-210ENST00000578733 NMBRP28336 390 aa11.21□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CD38P28907 300 aa11.21□□□□□ -0.61
CDK5RAP3-210ENST00000578733 MAGEA4P43358 317 aa11.21□□□□□ -0.61
CDK5RAP3-210ENST00000578733 AFF3P51826 1226 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-210ENST00000578733 THOP1P52888 689 aa11.21□□□□□ -0.61
CDK5RAP3-210ENST00000578733 C21orf59P57076 290 aa11.21□□□□□ -0.61
CDK5RAP3-210ENST00000578733 ACVR1Q04771 509 aa11.21□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CACNG1Q06432 222 aa11.21□□□□□ -0.61
CDK5RAP3-210ENST00000578733 PTK2BQ14289 1009 aa11.21□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CRYMQ14894 314 aa11.21□□□□□ -0.61
CDK5RAP3-210ENST00000578733 TRADDQ15628 312 aa11.21□□□□□ -0.61
CDK5RAP3-210ENST00000578733 WSCD2Q2TBF2 565 aa11.21□□□□□ -0.61
CDK5RAP3-210ENST00000578733 ANKRD20A4Q4UJ75 823 aa11.21□□□□□ -0.61
CDK5RAP3-210ENST00000578733 MSS51Q4VC12 460 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms