RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	SLC17A4	Q9Y2C5	497 aa		13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	PRSS38	A1L453	326 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	EME2	A4GXA9	379 aa	Predicted RBP	13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	GOLGA6C	A6NDK9	693 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	GOLGA6B	A6NDN3	693 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	NRDC	O43847	1150 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	PMPCB	O75439	489 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	CEACAM5	P06731	702 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	IVL	P07476	585 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	GOLGA6D	P0CG33	693 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	RBP3	P10745	1247 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	RPIA	P49247	311 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	DCDC1	P59894	354 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	CCZ1B	P86790	482 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	CCZ1	P86791	482 aa	Predicted RBP	13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	KLF1	Q13351	362 aa	Predicted RBP	13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	MPP3	Q13368	585 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	NR0B2	Q15466	257 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	CCDC157	Q569K6	752 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	FAM182A	Q5T1J6	154 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	HENMT1	Q5T8I9	393 aa	Known RBP	13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	KCTD16	Q68DU8	428 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	ITPRIPL1	Q6GPH6	555 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	NYAP1	Q6ZVC0	841 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	KDELC2	Q7Z4H8	507 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	TMC3	Q7Z5M5	1100 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	SCAMP4	Q969E2	229 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	EID2B	Q96D98	161 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	OXNAD1	Q96HP4	312 aa	Predicted RBP	13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	COX14	Q96I36	57 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	HIC2	Q96JB3	615 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	WDR24	Q96S15	920 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	RIOK2	Q9BVS4	552 aa	Known RBP	13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	GBA3	Q9H227	469 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	FAM83D	Q9H4H8	585 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	GRPEL1	Q9HAV7	217 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	CYP4F12	Q9HCS2	524 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	MRPL40	Q9NQ50	206 aa	Known RBP	13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	RAD18	Q9NS91	495 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	GOLGA6A	Q9NYA3	693 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	RSPH14	Q9UHP6	348 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	CD84	Q9UIB8	345 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	DOLK	Q9UPQ8	538 aa		13.58	□□□□□ -0.24
CSNK1D-208	ENST00000578501	STK10	O94804	968 aa	Known RBP	13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	CELA2B	P08218	269 aa	Predicted RBP	13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	HLA-DPA1	P20036	260 aa		13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	TNNT3	P45378	269 aa	Predicted RBP	13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	INSM1	Q01101	510 aa	Predicted RBP	13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	CAMK2B	Q13554	666 aa		13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	ANKRD20A2	Q5SQ80	823 aa		13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	ANKRD20A1	Q5TYW2	823 aa		13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	ANKRD20A3	Q5VUR7	823 aa		13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	DARS2	Q6PI48	645 aa	Known RBP	13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	LRRC69	Q6ZNQ3	347 aa		13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	LYSMD3	Q7Z3D4	306 aa		13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	SLC35F3	Q8IY50	421 aa		13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	ARL10	Q8N8L6	244 aa		13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	GPBAR1	Q8TDU6	330 aa		13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	NAT6	Q93015	286 aa		13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	MRGPRX2	Q96LB1	330 aa		13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	DCBLD2	Q96PD2	775 aa		13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	PPP1R2P1	Q96PQ5	205 aa		13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	TMEM168	Q9H0V1	697 aa		13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	TRABD	Q9H4I3	376 aa		13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	UBP1	Q9NZI7	540 aa		13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	ZNF711	Q9Y462	761 aa		13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	PTPRB	P23467	1997 aa		13.57	□□□□□ -0.24
CSNK1D-208	ENST00000578501	LRP4	O75096	1905 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	C5orf60	A6NFR6	353 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	KCNN4	O15554	427 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	C1QL1	O75973	258 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	ANXA9	O76027	345 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	FUCA1	P04066	466 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	PTMA	P06454	111 aa	Known RBP	13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	JUP	P14923	745 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	GEM	P55040	296 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	SLC1A5	Q15758	541 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	SIRPB2	Q5JXA9	342 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	HES3	Q5TGS1	186 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	MEI1	Q5TIA1	1274 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	PDPK2P	Q6A1A2	396 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	OGFOD3	Q6PK18	319 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	OR6C4	Q8NGE1	309 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	IFI44	Q8TCB0	444 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	CRELD1	Q96HD1	420 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	SPATA13	Q96N96	652 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	ALS2CR12	Q96Q35	445 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	AGAP2	Q99490	1192 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	GPR63	Q9BZJ6	419 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	C10orf88	Q9H8K7	445 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	CARS2	Q9HA77	564 aa	Known RBP	13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	HACD3	Q9P035	362 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	CNOT6	Q9ULM6	557 aa	Known RBP	13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	SUFU	Q9UMX1	484 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	GPR34	Q9UPC5	381 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	AAR2	Q9Y312	384 aa	Known RBP	13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	LOC400499	M0QZD8	3231 aa		13.56	□□□□□ -0.24
CSNK1D-208	ENST00000578501	GOLGA6L3	A6NEY3	463 aa		13.55	□□□□□ -0.24

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