RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 STYXQ8WUJ0 223 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 ANKRD7Q92527 254 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 STAMBPL1Q96FJ0 436 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 SGSM3Q96HU1 749 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 MRGPRX1Q96LB2 322 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 WDR83Q9BRX9 315 aaKnown RBP8.01□□□□□ -1.13
COPS3-215ENST00000578317 FOXQ1Q9C009 403 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 PABPC3Q9H361 631 aaKnown RBP8.01□□□□□ -1.13
COPS3-215ENST00000578317 SEMA4AQ9H3S1 761 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 LRRC4CQ9HCJ2 640 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 DYRK4Q9NR20 520 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 CHRAC1Q9NRG0 131 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 SYBUQ9NX95 663 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 MOCS1Q9NZB8 636 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 SAMD15Q9P1V8 674 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 ZC3H7BQ9UGR2 993 aaKnown RBP8.01□□□□□ -1.13
COPS3-215ENST00000578317 TCAF1Q9Y4C2 921 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 FAM169AQ9Y6X4 670 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 NCOR1O75376 2440 aa8.01□□□□□ -1.13
COPS3-215ENST00000578317 H7C0S8 307 aa8□□□□□ -1.13
COPS3-215ENST00000578317 PSMD11O00231 422 aa8□□□□□ -1.13
COPS3-215ENST00000578317 GHRHP01286 108 aa8□□□□□ -1.13
COPS3-215ENST00000578317 IGLV3-19P01714 112 aa8□□□□□ -1.13
COPS3-215ENST00000578317 ABHD2P08910 425 aa8□□□□□ -1.13
COPS3-215ENST00000578317 CYP2A6P11509 494 aaPredicted RBP8□□□□□ -1.13
COPS3-215ENST00000578317 ADRB3P13945 408 aa8□□□□□ -1.13
COPS3-215ENST00000578317 ZNF30P17039 623 aa8□□□□□ -1.13
COPS3-215ENST00000578317 LPOP22079 712 aaPredicted RBP8□□□□□ -1.13
COPS3-215ENST00000578317 DRD3P35462 400 aa8□□□□□ -1.13
COPS3-215ENST00000578317 P2RY2P41231 377 aa8□□□□□ -1.13
COPS3-215ENST00000578317 CLCN5P51795 746 aa8□□□□□ -1.13
COPS3-215ENST00000578317 NEK3P51956 506 aa8□□□□□ -1.13
COPS3-215ENST00000578317 ELP6Q0PNE2 266 aa8□□□□□ -1.13
COPS3-215ENST00000578317 POU6F1Q14863 301 aa8□□□□□ -1.13
COPS3-215ENST00000578317 FASTKD3Q14CZ7 662 aaKnown RBP8□□□□□ -1.13
COPS3-215ENST00000578317 KYNUQ16719 465 aa8□□□□□ -1.13
COPS3-215ENST00000578317 ANKRD20A4Q4UJ75 823 aa8□□□□□ -1.13
COPS3-215ENST00000578317 SPANXN3Q5MJ09 141 aa8□□□□□ -1.13
COPS3-215ENST00000578317 TSTD2Q5T7W7 516 aa8□□□□□ -1.13
COPS3-215ENST00000578317 ZDHHC20Q5W0Z9 365 aa8□□□□□ -1.13
COPS3-215ENST00000578317 NEK5Q6P3R8 708 aa8□□□□□ -1.13
COPS3-215ENST00000578317 CRTC1Q6UUV9 634 aa8□□□□□ -1.13
COPS3-215ENST00000578317 PARS2Q7L3T8 475 aaKnown RBP8□□□□□ -1.13
COPS3-215ENST00000578317 KBTBD6Q86V97 674 aa8□□□□□ -1.13
COPS3-215ENST00000578317 PALM2Q8IXS6 379 aa8□□□□□ -1.13
COPS3-215ENST00000578317 GSPT2Q8IYD1 628 aaKnown RBP8□□□□□ -1.13
COPS3-215ENST00000578317 IQCKQ8N0W5 287 aa8□□□□□ -1.13
COPS3-215ENST00000578317 TTC30BQ8N4P2 665 aa8□□□□□ -1.13
COPS3-215ENST00000578317 CAMKK1Q8N5S9 505 aa8□□□□□ -1.13
COPS3-215ENST00000578317 PPHLN1Q8NEY8 458 aaKnown RBP8□□□□□ -1.13
COPS3-215ENST00000578317 MDGA1Q8NFP4 955 aa8□□□□□ -1.13
COPS3-215ENST00000578317 BLOC1S5Q8TDH9 187 aa8□□□□□ -1.13
COPS3-215ENST00000578317 ARRDC3Q96B67 414 aa8□□□□□ -1.13
COPS3-215ENST00000578317 ZNF775Q96BV0 537 aaPredicted RBP8□□□□□ -1.13
COPS3-215ENST00000578317 SIPA1Q96FS4 1042 aa8□□□□□ -1.13
COPS3-215ENST00000578317 C9orf72Q96LT7 481 aa8□□□□□ -1.13
COPS3-215ENST00000578317 COL25A1Q9BXS0 654 aaPredicted RBP8□□□□□ -1.13
COPS3-215ENST00000578317 RASSF4Q9H2L5 321 aa8□□□□□ -1.13
COPS3-215ENST00000578317 CDC42EP4Q9H3Q1 356 aaKnown RBP8□□□□□ -1.13
COPS3-215ENST00000578317 PLAC1Q9HBJ0 212 aa8□□□□□ -1.13
COPS3-215ENST00000578317 PCDH12Q9NPG4 1184 aa8□□□□□ -1.13
COPS3-215ENST00000578317 ITM2CQ9NQX7 267 aa8□□□□□ -1.13
COPS3-215ENST00000578317 TREX1Q9NSU2 369 aa8□□□□□ -1.13
COPS3-215ENST00000578317 PIH1D1Q9NWS0 290 aaKnown RBP8□□□□□ -1.13
COPS3-215ENST00000578317 NINJ2Q9NZG7 142 aa8□□□□□ -1.13
COPS3-215ENST00000578317 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8□□□□□ -1.132e-6■□□□□ 11.3
COPS3-215ENST00000578317 IL17CQ9P0M4 197 aa8□□□□□ -1.13
COPS3-215ENST00000578317 DLGAP2Q9P1A6 1054 aa8□□□□□ -1.13
COPS3-215ENST00000578317 GPN3Q9UHW5 284 aaPredicted RBP8□□□□□ -1.13
COPS3-215ENST00000578317 FZD4Q9ULV1 537 aa8□□□□□ -1.13
COPS3-215ENST00000578317 SPO11Q9Y5K1 396 aa8□□□□□ -1.13
COPS3-215ENST00000578317 MAD1L1Q9Y6D9 718 aa8□□□□□ -1.13
COPS3-215ENST00000578317 RPS6KL1Q9Y6S9 549 aa8□□□□□ -1.13
COPS3-215ENST00000578317 ZCWPW2A0A1B0GU75 182 aa8□□□□□ -1.13
COPS3-215ENST00000578317 NPIPB15A6NHN6 443 aaPredicted RBP8□□□□□ -1.13
COPS3-215ENST00000578317 AURKAO14965 403 aa8□□□□□ -1.13
COPS3-215ENST00000578317 MID1O15344 667 aa8□□□□□ -1.13
COPS3-215ENST00000578317 RIPK2O43353 540 aa8□□□□□ -1.13
COPS3-215ENST00000578317 TSPAN6O43657 245 aa8□□□□□ -1.13
COPS3-215ENST00000578317 DNTTP04053 509 aa8□□□□□ -1.13
COPS3-215ENST00000578317 CTPS1P17812 591 aa8□□□□□ -1.13
COPS3-215ENST00000578317 XPAP23025 273 aaPredicted RBP8□□□□□ -1.13
COPS3-215ENST00000578317 HOXA6P31267 233 aa8□□□□□ -1.13
COPS3-215ENST00000578317 VIPR1P32241 457 aa8□□□□□ -1.13
COPS3-215ENST00000578317 HADHAP40939 763 aa8□□□□□ -1.13
COPS3-215ENST00000578317 GPX6P59796 221 aa8□□□□□ -1.13
COPS3-215ENST00000578317 CRADDP78560 199 aa8□□□□□ -1.13
COPS3-215ENST00000578317 CNTN1Q12860 1018 aa8□□□□□ -1.13
COPS3-215ENST00000578317 MTM1Q13496 603 aa8□□□□□ -1.13
COPS3-215ENST00000578317 TMEM52BQ4KMG9 183 aa8□□□□□ -1.13
COPS3-215ENST00000578317 PIP5KL1Q5T9C9 394 aa8□□□□□ -1.13
COPS3-215ENST00000578317 AGBL4Q5VU57 503 aa8□□□□□ -1.13
COPS3-215ENST00000578317 ESRP1Q6NXG1 681 aaKnown RBP8□□□□□ -1.13
COPS3-215ENST00000578317 ERAP2Q6P179 960 aa8□□□□□ -1.13
COPS3-215ENST00000578317 CASC4Q6P4E1 433 aa8□□□□□ -1.13
COPS3-215ENST00000578317 FBXO38Q6PIJ6 1188 aa8□□□□□ -1.13
COPS3-215ENST00000578317 UNC5AQ6ZN44 842 aa8□□□□□ -1.13
COPS3-215ENST00000578317 DPPA4Q7L190 304 aa8□□□□□ -1.13
COPS3-215ENST00000578317 CNPY4Q8N129 248 aa8□□□□□ -1.13
COPS3-215ENST00000578317 HDDC3Q8N4P3 179 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms