RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 OR2M4Q96R27 311 aa14.42□□□□□ -0.1
SMARCE1-213ENST00000578044 CCNL2Q96S94 520 aaPredicted RBP14.42□□□□□ -0.1
SMARCE1-213ENST00000578044 DEF6Q9H4E7 631 aa14.42□□□□□ -0.1
SMARCE1-213ENST00000578044 ABHD10Q9NUJ1 306 aa14.42□□□□□ -0.1
SMARCE1-213ENST00000578044 FLNBO75369 2602 aaKnown RBP14.42□□□□□ -0.1
SMARCE1-213ENST00000578044 C3orf70A6NLC5 250 aaPredicted RBP14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 RHPN2P1A8MT19 583 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 B4DGG1 531 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 B4GAT1O43505 415 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 AKR1B10O60218 316 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 MMP2P08253 660 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 JMJD7P0C870 316 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 LIPCP11150 499 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 SLC5A2P31639 672 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 SPINT3P49223 89 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 DSC2Q02487 901 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 GBE1Q04446 702 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 ITKQ08881 620 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 TAZQ16635 292 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 TMEM164Q5U3C3 297 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 NYAP1Q6ZVC0 841 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 DTX1Q86Y01 620 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 CNGA4Q8IV77 575 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 VSTM4Q8IW00 320 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 SFRP1Q8N474 314 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 OR4D9Q8NGE8 314 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 CCHCR1Q8TD31 782 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 RAPGEF5Q92565 580 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 CCDC42Q96M95 316 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 OLFM3Q96PB7 478 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 MLPHQ9BV36 600 aaPredicted RBP14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 EPB41L1Q9H4G0 881 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 MAGEE1Q9HCI5 957 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 EPB41L5Q9HCM4 733 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 DDX56Q9NY93 547 aaKnown RBP14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 LOXL2Q9Y4K0 774 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 ST14Q9Y5Y6 855 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 BOD1L1Q8NFC6 3051 aa14.41□□□□□ -0.1
SMARCE1-213ENST00000578044 OR5K4A6NMS3 321 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 PPP1R12AO14974 1030 aaPredicted RBP14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 MTSS1O43312 755 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 MFAP3LO75121 409 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 ECEL1O95672 775 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 ITGB2P05107 769 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 HLA-DQB2P05538 268 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 SLC2A4P14672 509 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 CTPS1P17812 591 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 CD1CP29017 333 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 GNPDA1P46926 289 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 LIMK2P53671 638 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 NIPAL4Q0D2K0 466 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 GALNT13Q8IUC8 556 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 CNTD1Q8N815 330 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 SCAMP4Q969E2 229 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 SH3KBP1Q96B97 665 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 IMP4Q96G21 291 aaKnown RBP14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 TRIB3Q96RU7 358 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 WDR24Q96S15 920 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 HERPUD2Q9BSE4 406 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 PACSIN1Q9BY11 444 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 SLC25A51Q9H1U9 297 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 CARD9Q9H257 536 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 FAM83DQ9H4H8 585 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 SARS2Q9NP81 518 aaKnown RBP14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 PKD2L2Q9NZM6 624 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 SEPT10Q9P0V9 454 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 MOSPD1Q9UJG1 213 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 CNOT6Q9ULM6 557 aaKnown RBP14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 CHKBQ9Y259 395 aa14.4□□□□□ -0.1
SMARCE1-213ENST00000578044 SDK2Q58EX2 2172 aa14.39□□□□□ -0.11
SMARCE1-213ENST00000578044 DNAJC6O75061 913 aa14.39□□□□□ -0.11
SMARCE1-213ENST00000578044 C1QL1O75973 258 aa14.39□□□□□ -0.11
SMARCE1-213ENST00000578044 EPOP01588 193 aa14.39□□□□□ -0.11
SMARCE1-213ENST00000578044 EPHA4P54764 986 aa14.39□□□□□ -0.11
SMARCE1-213ENST00000578044 QPCTQ16769 361 aa14.39□□□□□ -0.11
SMARCE1-213ENST00000578044 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.39□□□□□ -0.11
SMARCE1-213ENST00000578044 DENND2CQ68D51 928 aa14.39□□□□□ -0.11
SMARCE1-213ENST00000578044 WDR74Q6RFH5 385 aaPredicted RBP14.39□□□□□ -0.11
SMARCE1-213ENST00000578044 CCDC81Q6ZN84 652 aa14.39□□□□□ -0.11
SMARCE1-213ENST00000578044 CCNYQ8ND76 341 aa14.39□□□□□ -0.11
SMARCE1-213ENST00000578044 NAF1Q96HR8 494 aaKnown RBP14.39□□□□□ -0.11
SMARCE1-213ENST00000578044 CALR3Q96L12 384 aaKnown RBP14.39□□□□□ -0.11
SMARCE1-213ENST00000578044 ZSCAN5AQ9BUG6 496 aa14.39□□□□□ -0.11
SMARCE1-213ENST00000578044 RIOK2Q9BVS4 552 aaKnown RBP14.39□□□□□ -0.11
SMARCE1-213ENST00000578044 FOXP3Q9BZS1 431 aa14.39□□□□□ -0.11
SMARCE1-213ENST00000578044 NHEJ1Q9H9Q4 299 aaPredicted RBP14.39□□□□□ -0.11
SMARCE1-213ENST00000578044 UCK1Q9HA47 277 aa14.39□□□□□ -0.11
SMARCE1-213ENST00000578044 CPNE5Q9HCH3 593 aa14.39□□□□□ -0.11
SMARCE1-213ENST00000578044 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.39□□□□□ -0.11
SMARCE1-213ENST00000578044 IGHV1OR21-1A0A087WYE8 117 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 KIR2DS5A0A0G2JLQ3 304 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 A0A0G2JNG1 304 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 C1orf232A0A0U1RR37 186 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 LRRD1A4D1F6 860 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 A6NCN8 305 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 B4E171 279 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 KIR2DS3K7RE56 304 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 APOL1O14791 398 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 CASC3O15234 703 aaKnown RBP14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 CLDN7O95471 211 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms