RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 ALDH4A1P30038 563 aa16.55■□□□□ 0.24
CDK5RAP3-206ENST00000578018 ACTR1BP42025 376 aa16.55■□□□□ 0.24
CDK5RAP3-206ENST00000578018 ACTR1AP61163 376 aa16.55■□□□□ 0.24
CDK5RAP3-206ENST00000578018 NIPAL4Q0D2K0 466 aa16.55■□□□□ 0.24
CDK5RAP3-206ENST00000578018 SRSF6Q13247 344 aaKnown RBP16.55■□□□□ 0.24
CDK5RAP3-206ENST00000578018 PEX6Q13608 980 aa16.55■□□□□ 0.24
CDK5RAP3-206ENST00000578018 LY6DQ14210 128 aa16.55■□□□□ 0.24
CDK5RAP3-206ENST00000578018 SLC18A3Q16572 532 aa16.55■□□□□ 0.24
CDK5RAP3-206ENST00000578018 CLPPQ16740 277 aaPredicted RBP16.55■□□□□ 0.24
CDK5RAP3-206ENST00000578018 PYCR3Q53H96 274 aa16.55■□□□□ 0.24
CDK5RAP3-206ENST00000578018 CTNNBL1Q8WYA6 563 aaPredicted RBP16.55■□□□□ 0.24
CDK5RAP3-206ENST00000578018 HDAC11Q96DB2 347 aa16.55■□□□□ 0.24
CDK5RAP3-206ENST00000578018 COX14Q96I36 57 aa16.55■□□□□ 0.24
CDK5RAP3-206ENST00000578018 LYSMD1Q96S90 227 aa16.55■□□□□ 0.24
CDK5RAP3-206ENST00000578018 HAUS2Q9NVX0 235 aa16.55■□□□□ 0.24
CDK5RAP3-206ENST00000578018 FOXJ2Q9P0K8 574 aa16.55■□□□□ 0.24
CDK5RAP3-206ENST00000578018 ASH1LQ9NR48 2969 aaKnown RBP16.55■□□□□ 0.24
CDK5RAP3-206ENST00000578018 C9orf172C9J069 976 aa16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 H2AFZP0C0S5 128 aa16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 MX2P20592 715 aa16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 CA4P22748 312 aa16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 CD1CP29017 333 aa16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 MAN1A1P33908 653 aa16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 GPR3P46089 330 aa16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 RPL26P61254 145 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 SLC10A2Q12908 348 aaPredicted RBP16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 ZNF574Q6ZN55 896 aaPredicted RBP16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 USP53Q70EK8 1073 aa16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 H2AFVQ71UI9 128 aa16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 MARK2Q7KZI7 788 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 ZNF605Q86T29 641 aa16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 MAP7D3Q8IWC1 876 aa16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 RAVER1Q8IY67 606 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 NRSN1Q8IZ57 195 aa16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 LPCAT1Q8NF37 534 aa16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 USP7Q93009 1102 aa16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 RIOK2Q9BVS4 552 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 XPO4Q9C0E2 1151 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 PCDH9Q9HC56 1237 aa16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 WDR70Q9NW82 654 aa16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 DTLQ9NZJ0 730 aa16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 LCMT1Q9UIC8 334 aa16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 RPL26L1Q9UNX3 145 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-206ENST00000578018 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.54■□□□□ 0.241e-7■■■□□ 17.2
CDK5RAP3-206ENST00000578018 IGHV5-10-1A0A0J9YXX1 117 aa16.53■□□□□ 0.24
CDK5RAP3-206ENST00000578018 HGSO14964 777 aaPredicted RBP16.53■□□□□ 0.24
CDK5RAP3-206ENST00000578018 PPM1DO15297 605 aa16.53■□□□□ 0.24
CDK5RAP3-206ENST00000578018 INPP4BO15327 924 aa16.53■□□□□ 0.24
CDK5RAP3-206ENST00000578018 ZW10O43264 779 aa16.53■□□□□ 0.24
CDK5RAP3-206ENST00000578018 CLDN7O95471 211 aa16.53■□□□□ 0.24
CDK5RAP3-206ENST00000578018 MMP2P08253 660 aa16.53■□□□□ 0.24
CDK5RAP3-206ENST00000578018 CSF2RBP32927 897 aa16.53■□□□□ 0.24
CDK5RAP3-206ENST00000578018 MAPK10P53779 464 aa16.53■□□□□ 0.24
CDK5RAP3-206ENST00000578018 BIRC2Q13490 618 aa16.53■□□□□ 0.24
CDK5RAP3-206ENST00000578018 LRP8Q14114 963 aa16.53■□□□□ 0.24
CDK5RAP3-206ENST00000578018 ASTE1Q2TB18 679 aaPredicted RBP16.53■□□□□ 0.24
CDK5RAP3-206ENST00000578018 ZFAND4Q86XD8 727 aa16.53■□□□□ 0.24
CDK5RAP3-206ENST00000578018 GALNT13Q8IUC8 556 aa16.53■□□□□ 0.24
CDK5RAP3-206ENST00000578018 CCDC13Q8IYE1 715 aa16.53■□□□□ 0.24
CDK5RAP3-206ENST00000578018 RCBTB1Q8NDN9 531 aa16.53■□□□□ 0.24
CDK5RAP3-206ENST00000578018 EXD1Q8NHP7 514 aa16.53■□□□□ 0.24
CDK5RAP3-206ENST00000578018 RAPGEF5Q92565 580 aa16.53■□□□□ 0.24
CDK5RAP3-206ENST00000578018 CCDC74BQ96LY2 380 aa16.53■□□□□ 0.24
CDK5RAP3-206ENST00000578018 ANP32EQ9BTT0 268 aa16.53■□□□□ 0.24
CDK5RAP3-206ENST00000578018 B3GNT4Q9C0J1 378 aa16.53■□□□□ 0.24
CDK5RAP3-206ENST00000578018 BOD1L1Q8NFC6 3051 aa16.53■□□□□ 0.24
CDK5RAP3-206ENST00000578018 IGHV1OR21-1A0A087WYE8 117 aa16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 C1orf232A0A0U1RR37 186 aa16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 KCNK1O00180 336 aa16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 CCL4P13236 92 aa16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 KDELR1P24390 212 aa16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 FASLGP48023 281 aa16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 LIMK2P53671 638 aa16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 PPIDQ08752 370 aaKnown RBP16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 QPCTQ16769 361 aa16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 DTX1Q86Y01 620 aa16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 PLD5Q8N7P1 536 aa16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 CCNYQ8ND76 341 aa16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 OR4D9Q8NGE8 314 aa16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 SLC37A2Q8TED4 501 aa16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 MED8Q96G25 268 aa16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 ZNF830Q96NB3 372 aaPredicted RBP16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 RNF157Q96PX1 679 aa16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 WDR24Q96S15 920 aa16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 DNAJC7Q99615 494 aa16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 AKAP7Q9P0M2 348 aaPredicted RBP16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 SEPT10Q9P0V9 454 aa16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 VPS18Q9P253 973 aa16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 CNOT6Q9ULM6 557 aaKnown RBP16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 PCYT1BQ9Y5K3 369 aaPredicted RBP16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 OAS3Q9Y6K5 1087 aaKnown RBP16.52■□□□□ 0.24
CDK5RAP3-206ENST00000578018 SSU72P8A0A1W2PR75 194 aa16.51■□□□□ 0.23
CDK5RAP3-206ENST00000578018 DNAJC6O75061 913 aa16.51■□□□□ 0.23
CDK5RAP3-206ENST00000578018 JCHAINP01591 159 aa16.51■□□□□ 0.23
CDK5RAP3-206ENST00000578018 TPM3P06753 285 aa16.51■□□□□ 0.23
CDK5RAP3-206ENST00000578018 TMEM253P0C7T8 217 aa16.51■□□□□ 0.23
CDK5RAP3-206ENST00000578018 CD82P27701 267 aa16.51■□□□□ 0.23
CDK5RAP3-206ENST00000578018 CD86P42081 329 aa16.51■□□□□ 0.23
CDK5RAP3-206ENST00000578018 SPINT3P49223 89 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms