RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 CDC40O60508 579 aaKnown RBP eCLIP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 RNGTTO60942 597 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ULK1O75385 1050 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 RFPL2O75678 378 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ATP5HO75947 161 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 THEGLP0DJG4 465 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 NR2C1P13056 603 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF8P17098 575 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 TYRP1P17643 537 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 CPN2P22792 545 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 MAGEA11P43364 429 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 PXNP49023 591 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 GATMP50440 423 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 RPS3AP61247 264 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ATP6V0D1P61421 351 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 CHRNB3Q05901 458 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 NR0B2Q15466 257 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 KLHL26Q53HC5 615 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 GRTP1Q5TC63 336 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 CST9Q5W186 159 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 GALNT18Q6P9A2 607 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 LCLAT1Q6UWP7 414 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 UNQ6126/PRO20091Q6UXV3 157 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ATG14Q6ZNE5 492 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 IKBIPQ70UQ0 350 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ABHD13Q7L211 337 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 NUP54Q7Z3B4 507 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 SNX20Q7Z614 316 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF366Q8N895 744 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ZSCAN4Q8NAM6 433 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 OR2AP1Q8NGE2 309 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 GPT2Q8TD30 523 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ERP27Q96DN0 273 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 HSPA12BQ96MM6 686 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ELAC2Q9BQ52 826 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 CCM2Q9BSQ5 444 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 TBL1XR1Q9BZK7 514 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 TMEM245Q9H330 911 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 GPN2Q9H9Y4 310 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 IL1RL2Q9HB29 575 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 EXOSC4Q9NPD3 245 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 SCN3BQ9NY72 215 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 USE1Q9NZ43 259 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 MAT2BQ9NZL9 334 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 PISDQ9UG56 409 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 TRPS1Q9UHF7 1281 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ENOPH1Q9UHY7 261 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 CD84Q9UIB8 345 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 MCM8Q9UJA3 840 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 BLOC1S6Q9UL45 172 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 SPIN1Q9Y657 262 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 A0A0A0MRY4 1105 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 A0A1W2PP55 124 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ILVBLA1L0T0 632 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 UPK3BL1B0FP48 263 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 UPK3BL2E5RIL1 263 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 MYO1CO00159 1063 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 BCAT2O15382 392 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 MMP20O60882 483 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF623O75123 536 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 SERPINB7O75635 380 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 IL33O95760 270 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF682O95780 498 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ASGR2P07307 311 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 LYNP07948 512 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF865P0CJ78 1059 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 PNMA6AP0CW24 399 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 HLA-EP13747 358 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 FDPSP14324 419 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 EPCAMP16422 314 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 BMP7P18075 431 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 C5AR1P21730 350 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 TCEA1P23193 301 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 COILP38432 576 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 VIPR2P41587 438 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 RABIFP47224 123 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 KCNJ1P48048 391 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 HNMTP50135 292 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 CLCN5P51795 746 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 PGDP52209 483 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 NDST2P52849 883 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 PRKAA2P54646 552 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 PTPN5P54829 565 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 CYP4F2P78329 520 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ARG2P78540 354 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 MRPS21P82921 87 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 BDH1Q02338 343 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 CACNG1Q06432 222 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 C1orf61Q13536 156 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 CAMK1Q14012 370 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 RAB33AQ14088 237 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 MEA1Q16626 185 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 C15orf59Q2T9L4 293 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 RFTN2Q52LD8 501 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 DEPDC1Q5TB30 811 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 NT5DC1Q5TFE4 455 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 C1orf146Q5VVC0 180 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 POMZP3Q6PJE2 187 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 POTEHQ6S545 545 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms