RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 FAM72DQ6L9T8 149 aa17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 FAM151BQ6UXP7 276 aa17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 FAM72BQ86X60 149 aa17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 DENND1CQ8IV53 801 aa17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 NACC2Q96BF6 587 aa17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 EIF2B4Q9UI10 523 aaKnown RBP17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 KCTD3Q9Y597 815 aa17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 A8MT66 165 aa17.83■□□□□ 0.44
ATPAF1-214ENST00000576409 C22orf31O95567 290 aa17.83■□□□□ 0.44
ATPAF1-214ENST00000576409 THRBP10828 461 aa17.83■□□□□ 0.44
ATPAF1-214ENST00000576409 COX7A2P14406 83 aa17.83■□□□□ 0.44
ATPAF1-214ENST00000576409 ARMCX4Q5H9R4 360 aa17.83■□□□□ 0.44
ATPAF1-214ENST00000576409 LINGO4Q6UY18 593 aa17.83■□□□□ 0.44
ATPAF1-214ENST00000576409 TMEM86AQ8N2M4 240 aa17.83■□□□□ 0.44
ATPAF1-214ENST00000576409 OR13C4Q8NGS5 318 aa17.83■□□□□ 0.44
ATPAF1-214ENST00000576409 MCFD2Q8NI22 146 aa17.83■□□□□ 0.44
ATPAF1-214ENST00000576409 TRPM5Q9NZQ8 1165 aa17.83■□□□□ 0.44
ATPAF1-214ENST00000576409 OGDHLQ9ULD0 1010 aa17.83■□□□□ 0.44
ATPAF1-214ENST00000576409 PADI4Q9UM07 663 aa17.83■□□□□ 0.44
ATPAF1-214ENST00000576409 TRIM43BA6NCK2 446 aa17.83■□□□□ 0.44
ATPAF1-214ENST00000576409 VPS4BO75351 444 aa17.83■□□□□ 0.44
ATPAF1-214ENST00000576409 ZNF182P17025 639 aaPredicted RBP17.83■□□□□ 0.44
ATPAF1-214ENST00000576409 SLC7A1P30825 629 aa17.83■□□□□ 0.44
ATPAF1-214ENST00000576409 MC4RP32245 332 aa17.83■□□□□ 0.44
ATPAF1-214ENST00000576409 TPGS1Q6ZTW0 290 aa17.83■□□□□ 0.44
ATPAF1-214ENST00000576409 THAP5Q7Z6K1 395 aa17.83■□□□□ 0.44
ATPAF1-214ENST00000576409 SVOPQ8N4V2 548 aa17.83■□□□□ 0.44
ATPAF1-214ENST00000576409 TRPC4Q9UBN4 977 aa17.83■□□□□ 0.44
ATPAF1-214ENST00000576409 AKAP11Q9UKA4 1901 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 NBNO60934 754 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 MLYCDO95822 493 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 TBX18O95935 607 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 GRK3P35626 688 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 CRATP43155 626 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 ALDH7A1P49419 539 aaKnown RBP17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 DGKQP52824 942 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 IRF8Q02556 426 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 TRIP4Q15650 581 aaPredicted RBP17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 CACUL1Q86Y37 369 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 BBS7Q8IWZ6 715 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 ASB9Q96DX5 294 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 FAM105AQ9NUU6 356 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 HSPA7P48741 367 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 ZFAND2BQ8WV99 257 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 PHF21AQ96BD5 680 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 TMIGD2Q96BF3 282 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 C12orf43Q96C57 262 aaKnown RBP17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 PANX1Q96RD7 426 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 FAM126AQ9BYI3 521 aaPredicted RBP17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 BTBD3Q9Y2F9 522 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 H3BNX3 289 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 IKBKEQ14164 716 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 AHSA2Q719I0 299 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 ZNF605Q86T29 641 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 CPNE9Q8IYJ1 553 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 GLT1D1Q96MS3 346 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 ZBTB26Q9HCK0 441 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 PTGDR2Q9Y5Y4 395 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 SQORQ9Y6N5 450 aa17.82■□□□□ 0.44
ATPAF1-214ENST00000576409 MYO5AQ9Y4I1 1855 aaKnown RBP17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 CAPN1P07384 714 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 HPCAP84074 193 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 MS4A2Q01362 244 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 LAPTM4AQ15012 233 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 KRT84Q9NSB2 600 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 EURLQ9NYK6 297 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 H2AFY2Q9P0M6 372 aaPredicted RBP17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 EFCAB10A6NFE3 127 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 BOLA2-SMG1P6H3BVE0 249 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 TLR5O60602 858 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 CYP7B1O75881 506 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 GRK4P32298 578 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 RHDQ02161 417 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 LAPTM5Q13571 262 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 OR52E8Q6IFG1 317 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 OR7D4Q8NG98 312 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 OR52J3Q8NH60 311 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 PCYT2Q99447 389 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 TEX12Q9BXU0 123 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 BCO2Q9BYV7 579 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 PNPLA8Q9NP80 782 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 TRMT13Q9NUP7 481 aaKnown RBP17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 FBXW11Q9UKB1 542 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 TBC1D30Q9Y2I9 924 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 SF3B1O75533 1304 aaKnown RBP eCLIP17.81■□□□□ 0.444e-6■■■■■ 120.3
ATPAF1-214ENST00000576409 GOT2P00505 430 aaKnown RBP17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 PABPC4LP0CB38 370 aaKnown RBP17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 COL6A1P12109 1028 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 FUT4P22083 530 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 ZNF132P52740 706 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 TXNDC5Q8NBS9 432 aaKnown RBP17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 RSPH1Q8WYR4 309 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 APOLD1Q96LR9 279 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 HNRNPABQ99729 332 aaKnown RBP17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 GALPQ9UBC7 116 aa17.81■□□□□ 0.44
ATPAF1-214ENST00000576409 RFXANKO14593 260 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 ANGPTL1O95841 491 aa17.8■□□□□ 0.44
ATPAF1-214ENST00000576409 ALOX15P16050 662 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms