RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 CBARPQ8N350 705 aaPredicted RBP15.18■□□□□ 0.02
SMG6-220ENST00000576218 BLOC1S5Q8TDH9 187 aa15.18■□□□□ 0.02
SMG6-220ENST00000576218 FICDQ9BVA6 458 aa15.18■□□□□ 0.02
SMG6-220ENST00000576218 TMEM168Q9H0V1 697 aa15.18■□□□□ 0.02
SMG6-220ENST00000576218 PADI4Q9UM07 663 aa15.18■□□□□ 0.02
SMG6-220ENST00000576218 CLCA2Q9UQC9 943 aa15.18■□□□□ 0.02
SMG6-220ENST00000576218 TMEM98Q9Y2Y6 226 aa15.18■□□□□ 0.02
SMG6-220ENST00000576218 AAR2Q9Y312 384 aaKnown RBP15.18■□□□□ 0.02
SMG6-220ENST00000576218 TMEM8BA6NDV4 472 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 FGF1P05230 155 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 CEACAM5P06731 702 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 PSMB4P28070 264 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 POLD2P49005 469 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 SIRPB2Q5JXA9 342 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 ANKRD20A2Q5SQ80 823 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 ANKRD20A1Q5TYW2 823 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 ANKRD20A3Q5VUR7 823 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 KCTD16Q68DU8 428 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 KDELC1Q6UW63 502 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 MARCH9Q86YJ5 346 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 KYQ8NBH2 561 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 CCDC110Q8TBZ0 833 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 UBE2Q2Q8WVN8 375 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 ZCCHC14Q8WYQ9 949 aaKnown RBP15.17■□□□□ 0.02
SMG6-220ENST00000576218 TADA1Q96BN2 335 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 OXNAD1Q96HP4 312 aaPredicted RBP15.17■□□□□ 0.02
SMG6-220ENST00000576218 SPATA13Q96N96 652 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 OR2M4Q96R27 311 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 AGAP2Q99490 1192 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 ZSCAN5AQ9BUG6 496 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 BOCQ9BWV1 1114 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 FRMD8Q9BZ67 464 aaPredicted RBP15.17■□□□□ 0.02
SMG6-220ENST00000576218 HACD3Q9P035 362 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 ZNHIT2Q9UHR6 403 aa15.17■□□□□ 0.02
SMG6-220ENST00000576218 GOLGA4Q13439 2230 aaKnown RBP15.16■□□□□ 0.02
SMG6-220ENST00000576218 EPOP01588 193 aa15.16■□□□□ 0.02
SMG6-220ENST00000576218 ATP1A1P05023 1023 aaKnown RBP15.16■□□□□ 0.02
SMG6-220ENST00000576218 PROS1P07225 676 aa15.16■□□□□ 0.02
SMG6-220ENST00000576218 IVLP07476 585 aa15.16■□□□□ 0.02
SMG6-220ENST00000576218 ACTN2P35609 894 aa15.16■□□□□ 0.02
SMG6-220ENST00000576218 CHRNA4P43681 627 aa15.16■□□□□ 0.02
SMG6-220ENST00000576218 PPM1FP49593 454 aaPredicted RBP15.16■□□□□ 0.02
SMG6-220ENST00000576218 CCZ1BP86790 482 aa15.16■□□□□ 0.02
SMG6-220ENST00000576218 CCZ1P86791 482 aaPredicted RBP15.16■□□□□ 0.02
SMG6-220ENST00000576218 SLC1A5Q15758 541 aa15.16■□□□□ 0.02
SMG6-220ENST00000576218 SLC30A9Q6PML9 568 aa15.16■□□□□ 0.02
SMG6-220ENST00000576218 NLRP8Q86W28 1048 aa15.16■□□□□ 0.02
SMG6-220ENST00000576218 FAM71DQ8N9W8 422 aa15.16■□□□□ 0.02
SMG6-220ENST00000576218 TRIM58Q8NG06 486 aa15.16■□□□□ 0.02
SMG6-220ENST00000576218 GDAP1Q8TB36 358 aa15.16■□□□□ 0.02
SMG6-220ENST00000576218 GATA6Q92908 595 aa15.16■□□□□ 0.02
SMG6-220ENST00000576218 MRGPRX2Q96LB1 330 aa15.16■□□□□ 0.02
SMG6-220ENST00000576218 TRABDQ9H4I3 376 aa15.16■□□□□ 0.02
SMG6-220ENST00000576218 BPIFA1Q9NP55 256 aa15.16■□□□□ 0.02
SMG6-220ENST00000576218 SLC17A4Q9Y2C5 497 aa15.16■□□□□ 0.02
SMG6-220ENST00000576218 PPP2R2CQ9Y2T4 447 aa15.16■□□□□ 0.02
SMG6-220ENST00000576218 PKP3Q9Y446 797 aa15.16■□□□□ 0.02
SMG6-220ENST00000576218 SPO11Q9Y5K1 396 aa15.16■□□□□ 0.02
SMG6-220ENST00000576218 ARID1BQ8NFD5 2236 aaPredicted RBP15.16■□□□□ 0.02
SMG6-220ENST00000576218 LOC285095A0A1B0GVY8 99 aa15.15■□□□□ 0.02
SMG6-220ENST00000576218 EME2A4GXA9 379 aaPredicted RBP15.15■□□□□ 0.02
SMG6-220ENST00000576218 FAM221BA6H8Z2 402 aa15.15■□□□□ 0.02
SMG6-220ENST00000576218 OPA1O60313 960 aa15.15■□□□□ 0.02
SMG6-220ENST00000576218 SLC25A14O95258 325 aaPredicted RBP15.15■□□□□ 0.02
SMG6-220ENST00000576218 MT-CO3P00414 261 aa15.15■□□□□ 0.02
SMG6-220ENST00000576218 SOD1P00441 154 aa15.15■□□□□ 0.02
SMG6-220ENST00000576218 ACTR1BP42025 376 aa15.15■□□□□ 0.02
SMG6-220ENST00000576218 DCDC1P59894 354 aa15.15■□□□□ 0.02
SMG6-220ENST00000576218 ACTR1AP61163 376 aa15.15■□□□□ 0.02
SMG6-220ENST00000576218 INSM1Q01101 510 aaPredicted RBP15.15■□□□□ 0.02
SMG6-220ENST00000576218 TARDBPQ13148 414 aaKnown RBP eCLIP15.15■□□□□ 0.02
SMG6-220ENST00000576218 HENMT1Q5T8I9 393 aaKnown RBP15.15■□□□□ 0.02
SMG6-220ENST00000576218 TMC3Q7Z5M5 1100 aa15.15■□□□□ 0.02
SMG6-220ENST00000576218 PHYKPLQ8IUZ5 450 aa15.15■□□□□ 0.02
SMG6-220ENST00000576218 TRAM1L1Q8N609 369 aa15.15■□□□□ 0.02
SMG6-220ENST00000576218 PDCD7Q8N8D1 485 aaKnown RBP15.15■□□□□ 0.02
SMG6-220ENST00000576218 GPR26Q8NDV2 337 aa15.15■□□□□ 0.02
SMG6-220ENST00000576218 OR6C4Q8NGE1 309 aa15.15■□□□□ 0.02
SMG6-220ENST00000576218 CCL4L1Q8NHW4 92 aa15.15■□□□□ 0.02
SMG6-220ENST00000576218 NXPE2Q96DL1 559 aa15.15■□□□□ 0.02
SMG6-220ENST00000576218 DEPDC7Q96QD5 511 aa15.15■□□□□ 0.02
SMG6-220ENST00000576218 APOL2Q9BQE5 337 aa15.15■□□□□ 0.02
SMG6-220ENST00000576218 CCDC3Q9BQI4 270 aa15.15■□□□□ 0.02
SMG6-220ENST00000576218 ZMYND15Q9H091 742 aa15.15■□□□□ 0.02
SMG6-220ENST00000576218 CCDC86Q9H6F5 360 aaKnown RBP15.15■□□□□ 0.02
SMG6-220ENST00000576218 TRNAU1APQ9NX07 287 aaKnown RBP15.15■□□□□ 0.02
SMG6-220ENST00000576218 AK5Q9Y6K8 562 aa15.15■□□□□ 0.02
SMG6-220ENST00000576218 LY6G6EA0A0G2JKS1 128 aa15.14■□□□□ 0.01
SMG6-220ENST00000576218 AGTP01019 485 aa15.14■□□□□ 0.01
SMG6-220ENST00000576218 AK4P27144 223 aaPredicted RBP15.14■□□□□ 0.01
SMG6-220ENST00000576218 ADCY8P40145 1251 aa15.14■□□□□ 0.01
SMG6-220ENST00000576218 LMAN1P49257 510 aa15.14■□□□□ 0.01
SMG6-220ENST00000576218 CTBSQ01459 385 aa15.14■□□□□ 0.01
SMG6-220ENST00000576218 GTF2H3Q13889 308 aa15.14■□□□□ 0.01
SMG6-220ENST00000576218 SPIDRQ14159 915 aa15.14■□□□□ 0.01
SMG6-220ENST00000576218 P3H1Q32P28 736 aa15.14■□□□□ 0.01
SMG6-220ENST00000576218 MEI1Q5TIA1 1274 aa15.14■□□□□ 0.01
SMG6-220ENST00000576218 ZDHHC20Q5W0Z9 365 aa15.14■□□□□ 0.01
SMG6-220ENST00000576218 CHST15Q7LFX5 561 aaPredicted RBP15.14■□□□□ 0.01
SMG6-220ENST00000576218 ZDHHC1Q8WTX9 485 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms