RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ARL8AQ96BM9 186 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 ATXN7L3BQ96GX2 97 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 SGSM3Q96HU1 749 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 FAM83DQ9H4H8 585 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 TMBIM4Q9HC24 238 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 NSMCE4AQ9NXX6 385 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 EBF1Q9UH73 591 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 LRRK1Q38SD2 2015 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 FOXO6A8MYZ6 492 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 RGS16O15492 202 aaPredicted RBP23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 LZTS3O60299 673 aaPredicted RBP23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 RECQL5O94762 991 aaPredicted RBP23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 GABRB3P28472 473 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 CACNG1Q06432 222 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 ZDHHC20Q5W0Z9 365 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 CWF19L1Q69YN2 538 aaKnown RBP23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 CROCCP2Q86T23 111 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 KBTBD6Q86V97 674 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 GABPB2Q8TAK5 448 aaPredicted RBP23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 DTD2Q96FN9 168 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 ASB8Q9H765 288 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 LGALS13Q9UHV8 139 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 ZNF180Q9UJW8 692 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 IGLON5A6NGN9 336 aa23.92■■□□□ 1.42
ATPAF1-213ENST00000574428 DCXO43602 365 aa23.92■■□□□ 1.42
ATPAF1-213ENST00000574428 AHSGP02765 367 aa23.92■■□□□ 1.42
ATPAF1-213ENST00000574428 UGT1A6P19224 532 aa23.92■■□□□ 1.42
ATPAF1-213ENST00000574428 UGT1A1P22309 533 aa23.92■■□□□ 1.42
ATPAF1-213ENST00000574428 UGT1A4P22310 534 aa23.92■■□□□ 1.42
ATPAF1-213ENST00000574428 CA5AP35218 305 aa23.92■■□□□ 1.42
ATPAF1-213ENST00000574428 UGT1A3P35503 534 aa23.92■■□□□ 1.42
ATPAF1-213ENST00000574428 UGT1A5P35504 534 aa23.92■■□□□ 1.42
ATPAF1-213ENST00000574428 PTPN5P54829 565 aa23.92■■□□□ 1.42
ATPAF1-213ENST00000574428 DCDC1P59894 354 aa23.92■■□□□ 1.42
ATPAF1-213ENST00000574428 NFATC2Q13469 925 aa23.92■■□□□ 1.42
ATPAF1-213ENST00000574428 BMPR2Q13873 1038 aa23.92■■□□□ 1.42
ATPAF1-213ENST00000574428 ZNF789Q5FWF6 425 aa23.92■■□□□ 1.42
ATPAF1-213ENST00000574428 SEL1L3Q68CR1 1132 aa23.92■■□□□ 1.42
ATPAF1-213ENST00000574428 TAS2R42Q7RTR8 314 aa23.92■■□□□ 1.42
ATPAF1-213ENST00000574428 LMNTD2Q8IXW0 634 aa23.92■■□□□ 1.42
ATPAF1-213ENST00000574428 RIBC1Q8N443 379 aaPredicted RBP23.92■■□□□ 1.42
ATPAF1-213ENST00000574428 RIOK2Q9BVS4 552 aaKnown RBP23.92■■□□□ 1.42
ATPAF1-213ENST00000574428 RGSL1A5PLK6 1076 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 FAM47DPA6NHR8 397 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 ITGALP20701 1170 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 PMLP29590 882 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 SFSWAPQ12872 951 aaKnown RBP23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 RASA2Q15283 850 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 TTMPQ5BVD1 217 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 KIAA0408Q6ZU52 694 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 SNX20Q7Z614 316 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 SDCCAG8Q86SQ7 713 aaPredicted RBP23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 ZNF398Q8TD17 642 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 RBBP8Q99708 897 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 SPATA16Q9BXB7 569 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 ABCG8Q9H221 673 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 ITM2CQ9NQX7 267 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 RAD18Q9NS91 495 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 PLXNA2O75051 1894 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 HAUS5O94927 633 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 S1PR4O95977 384 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 OGNP20774 298 aaKnown RBP23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 TYSND1Q2T9J0 566 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 GRTP1Q5TC63 336 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 NRSN1Q8IZ57 195 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 AP2M1Q96CW1 435 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 NUS1Q96E22 293 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 PGM2Q96G03 612 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 MCMBPQ9BTE3 642 aa23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 USP36Q9P275 1121 aaKnown RBP23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 NFKBIL1Q9UBC1 381 aaPredicted RBP23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 ZFR2Q9UPR6 939 aaKnown RBP23.91■■□□□ 1.42
ATPAF1-213ENST00000574428 PI15O43692 258 aa23.9■■□□□ 1.42
ATPAF1-213ENST00000574428 ACSL1P33121 698 aa23.9■■□□□ 1.42
ATPAF1-213ENST00000574428 CSE1LP55060 971 aaKnown RBP23.9■■□□□ 1.42
ATPAF1-213ENST00000574428 ATP13A5Q4VNC0 1218 aa23.9■■□□□ 1.42
ATPAF1-213ENST00000574428 HENMT1Q5T8I9 393 aaKnown RBP23.9■■□□□ 1.42
ATPAF1-213ENST00000574428 MROH9Q5TGP6 573 aa23.9■■□□□ 1.42
ATPAF1-213ENST00000574428 CNSTQ6PJW8 725 aa23.9■■□□□ 1.42
ATPAF1-213ENST00000574428 CYP2U1Q7Z449 544 aa23.9■■□□□ 1.42
ATPAF1-213ENST00000574428 ZC3HC1Q86WB0 502 aaKnown RBP23.9■■□□□ 1.42
ATPAF1-213ENST00000574428 TBC1D3DA0A087WVF3 549 aa23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 TBC1D3IA0A087WXS9 549 aa23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 TBC1D3EA0A087X179 549 aa23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 TBC1D3KA0A087X1G2 549 aa23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 HMX2A2RU54 273 aa23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 TBC1D3FA6NER0 549 aaPredicted RBP23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 TBC1D3LB9A6J9 549 aa23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 RNGTTO60942 597 aaKnown RBP23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 TBC1D3HP0C7X1 549 aa23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 LEPRP48357 1165 aaKnown RBP23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 PXNP49023 591 aaPredicted RBP23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 SERPINB9P50453 376 aa23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 CREB5Q02930 508 aa23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 ZNF284Q2VY69 593 aa23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 AARS2Q5JTZ9 985 aaKnown RBP23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 KCTD16Q68DU8 428 aa23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 TBC1D3GQ6DHY5 549 aa23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 TBC1D3CQ6IPX1 549 aa23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 SERPINA9Q86WD7 417 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms