RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 GEN1Q17RS7 908 aa28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 ACCSLQ4AC99 568 aa28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 FAM91A1Q658Y4 838 aa28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 CES5AQ6NT32 575 aa28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 GPR149Q86SP6 731 aa28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 STK40Q8N2I9 435 aa28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 OR2A12Q8NGT7 310 aa28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 BPIFB1Q8TDL5 484 aa28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 HLA-CQ95604 372 aa28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 EYSQ5T1H1 3165 aa28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 C1orf232A0A0U1RR37 186 aa28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 H3BQ06 376 aaPredicted RBP28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 ATP5HO75947 161 aa28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 SNUPNO95149 360 aaKnown RBP28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 ASLP04424 464 aa28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 KCNA5P22460 613 aa28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 VIPR2P41587 438 aa28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 PTGER3P43115 390 aa28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 MAGEA9P43362 315 aa28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 AQP5P55064 265 aa28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 ZRANB3Q5FWF4 1079 aa28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 TPRG1Q6ZUI0 275 aa28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 CLNKQ7Z7G1 428 aa28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 PIM3Q86V86 326 aa28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 NAT16Q8N8M0 369 aa28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 FRS2Q8WU20 508 aa28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 FGF13Q92913 245 aa28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 S1PR5Q9H228 398 aa28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 CCDC68Q9H2F9 335 aa28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 SAR1AQ9NR31 198 aa28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 TAS2R13Q9NYV9 303 aa28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 ZFP69BQ9UJL9 534 aa28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 APPL1Q9UKG1 709 aa28.31■■■□□ 2.12
CTDNEP1-210ENST00000574322 A0A0U1RQS6 177 aa28.3■■■□□ 2.12
CTDNEP1-210ENST00000574322 GAPDHSO14556 408 aaPredicted RBP28.3■■■□□ 2.12
CTDNEP1-210ENST00000574322 SRP72O76094 671 aaKnown RBP28.3■■■□□ 2.12
CTDNEP1-210ENST00000574322 SRPRAP08240 638 aaKnown RBP28.3■■■□□ 2.12
CTDNEP1-210ENST00000574322 SERPINB5P36952 375 aa28.3■■■□□ 2.12
CTDNEP1-210ENST00000574322 SETMARQ53H47 684 aaPredicted RBP28.3■■■□□ 2.12
CTDNEP1-210ENST00000574322 ISCA2Q86U28 154 aa28.3■■■□□ 2.12
CTDNEP1-210ENST00000574322 SYTL2Q9HCH5 934 aa28.3■■■□□ 2.12
CTDNEP1-210ENST00000574322 MARCOQ9UEW3 520 aaPredicted RBP28.3■■■□□ 2.12
CTDNEP1-210ENST00000574322 CD207Q9UJ71 328 aa28.3■■■□□ 2.12
CTDNEP1-210ENST00000574322 OAS3Q9Y6K5 1087 aaKnown RBP28.3■■■□□ 2.12
CTDNEP1-210ENST00000574322 SLC30A1Q9Y6M5 507 aa28.3■■■□□ 2.12
CTDNEP1-210ENST00000574322 NUMBLQ9Y6R0 609 aa28.3■■■□□ 2.12
CTDNEP1-210ENST00000574322 UBA6A0AVT1 1052 aaPredicted RBP28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 TRIM24O15164 1050 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 PKMP14618 531 aaKnown RBP28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 FMO4P31512 558 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 DGKGP49619 791 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 NCALDP61601 193 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 RCN2Q14257 317 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 Q6ZVU0 165 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 ETFBKMTQ8IXQ9 262 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 TBRG4Q969Z0 631 aaKnown RBP eCLIP28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 ZNF195O14628 629 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 NPHS1O60500 1241 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 UNC5CO95185 931 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 CLDN7O95471 211 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 HSPA4LO95757 839 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 KITP10721 976 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 BMP1P13497 986 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 CD1DP15813 335 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 SERPINB3P29508 390 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 NNMTP40261 264 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 HK2P52789 917 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 PDAP1Q13442 181 aaKnown RBP28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 PTPRNQ16849 979 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 USP45Q70EL2 814 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 TXNDC5Q8NBS9 432 aaKnown RBP28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 ASIC4Q96FT7 647 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 P2RY12Q9H244 342 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 ZDHHC6Q9H6R6 413 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 TXLNGQ9NUQ3 528 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 PNPOQ9NVS9 261 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 DNAJC28Q9NX36 388 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 CDH22Q9UJ99 828 aa28.29■■■□□ 2.12
CTDNEP1-210ENST00000574322 TRBV5-4A0A0C4DH59 114 aa28.28■■■□□ 2.12
CTDNEP1-210ENST00000574322 RHOBTB1O94844 696 aa28.28■■■□□ 2.12
CTDNEP1-210ENST00000574322 NFATC1O95644 943 aa28.28■■■□□ 2.12
CTDNEP1-210ENST00000574322 ESR1P03372 595 aa28.28■■■□□ 2.12
CTDNEP1-210ENST00000574322 NAGLUP54802 743 aa28.28■■■□□ 2.12
CTDNEP1-210ENST00000574322 ATAT1Q5SQI0 421 aa28.28■■■□□ 2.12
CTDNEP1-210ENST00000574322 GRAMD4Q6IC98 578 aa28.28■■■□□ 2.12
CTDNEP1-210ENST00000574322 CRTC1Q6UUV9 634 aa28.28■■■□□ 2.12
CTDNEP1-210ENST00000574322 PIWIL4Q7Z3Z4 852 aaKnown RBP28.28■■■□□ 2.12
CTDNEP1-210ENST00000574322 SNX20Q7Z614 316 aa28.28■■■□□ 2.12
CTDNEP1-210ENST00000574322 PAF1Q8N7H5 531 aa28.28■■■□□ 2.12
CTDNEP1-210ENST00000574322 SMRP1Q8NCR6 262 aa28.28■■■□□ 2.12
CTDNEP1-210ENST00000574322 RHEBL1Q8TAI7 183 aa28.28■■■□□ 2.12
CTDNEP1-210ENST00000574322 ECT2Q9H8V3 914 aa28.28■■■□□ 2.12
CTDNEP1-210ENST00000574322 RAP2CQ9Y3L5 183 aa28.28■■■□□ 2.12
CTDNEP1-210ENST00000574322 KIF26AQ9ULI4 1882 aaPredicted RBP28.28■■■□□ 2.12
CTDNEP1-210ENST00000574322 NPIPB15A6NHN6 443 aaPredicted RBP28.27■■■□□ 2.12
CTDNEP1-210ENST00000574322 HGSO14964 777 aaPredicted RBP28.27■■■□□ 2.12
CTDNEP1-210ENST00000574322 PYGLP06737 847 aa28.27■■■□□ 2.12
CTDNEP1-210ENST00000574322 TFEBP19484 476 aa28.27■■■□□ 2.12
CTDNEP1-210ENST00000574322 PPARGP37231 505 aaPredicted RBP28.27■■■□□ 2.12
CTDNEP1-210ENST00000574322 RECQLP46063 649 aaPredicted RBP28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms