RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 BPIFA1Q9NP55 256 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 DLL3Q9NYJ7 618 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 IL17CQ9P0M4 197 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 SPASTQ9UBP0 616 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 APOBEC3BQ9UH17 382 aaKnown RBP12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 PCYOX1Q9UHG3 505 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 MOSPD1Q9UJG1 213 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 APPL1Q9UKG1 709 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 ARL5AQ9Y689 179 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 LRP4O75096 1905 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 PCNX2A6NKB5 2137 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 AURKAO14965 403 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 PIAS2O75928 621 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 CD59P13987 128 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 TPSB2P20231 275 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 CSRP1P21291 193 aaKnown RBP12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 VPS41P49754 854 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 EIF2B5Q13144 721 aaKnown RBP12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 SEPT6Q14141 434 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 ELOCQ15369 112 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 TPSAB1Q15661 275 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 ZNF542PQ5EBM4 170 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 ALS2CLQ60I27 953 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 DBX2Q6ZNG2 339 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 RFLNAQ6ZTI6 216 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 SYDE1Q6ZW31 735 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 NLRP9Q7RTR0 991 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 RD3Q7Z3Z2 195 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 PHYKPLQ8IUZ5 450 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 SDR16C5Q8N3Y7 309 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 FSTL5Q8N475 847 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 OR52K1Q8NGK4 314 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 SCG3Q8WXD2 468 aaKnown RBP12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 SLCO2A1Q92959 643 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 CDC6Q99741 560 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 DUSP23Q9BVJ7 150 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 LGR4Q9BXB1 951 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 DDX47Q9H0S4 455 aaKnown RBP12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 DOLKQ9UPQ8 538 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 CSNK1G3Q9Y6M4 447 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 DGKBQ9Y6T7 804 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 ZNF106Q9H2Y7 1883 aaKnown RBP12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 CFAP54Q96N23 3096 aa12.69□□□□□ -0.38
TRAPPC1-206ENST00000573989 MYLKQ15746 1914 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 GLYATL1P3A0A0U1RQE8 302 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 PRSS38A1L453 326 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 HEATR9A2RTY3 570 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 INPP4BO15327 924 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 AQP9O43315 295 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 SH3BP5O60239 455 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 SDC3O75056 442 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 SLC25A14O95258 325 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 ASMTLO95671 621 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 SOD1P00441 154 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 CEACAM1P13688 526 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 TPH1P17752 444 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 DGKAP23743 735 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 CKAP4Q07065 602 aaKnown RBP12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 BNIP3Q12983 259 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 PEX6Q13608 980 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 POU6F1Q14863 301 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 SHBQ15464 509 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 SKIDA1Q1XH10 827 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 PRRT3Q5FWE3 981 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 TPRG1LQ5T0D9 272 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 KDM7AQ6ZMT4 941 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 PCGF5Q86SE9 256 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 GKN2Q86XP6 184 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 GATAD2AQ86YP4 633 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 KLHL7Q8IXQ5 586 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 PELI3Q8N2H9 469 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 OR4K2Q8NGD2 314 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 STYXQ8WUJ0 223 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 TSACCQ96A04 125 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 VPS35Q96QK1 796 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 AGAP2Q99490 1192 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 CYP4F12Q9HCS2 524 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 CASS4Q9NQ75 786 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 EVA1BQ9NVM1 165 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 BFARQ9NZS9 450 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 VPS18Q9P253 973 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 ASIC3Q9UHC3 531 aa12.68□□□□□ -0.38
TRAPPC1-206ENST00000573989 TMEM202A6NGA9 273 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 GPR89AB7ZAQ6 455 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 NDC80O14777 642 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 TM4SF5O14894 197 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 SCAMP1O15126 338 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 FANCGO15287 622 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 BUD23O43709 281 aaKnown RBP12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 IVLP07476 585 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 GPR89BP0CG08 455 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 ADRA1DP25100 572 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 ADCY8P40145 1251 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 NPY2RP49146 381 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 NOVA1P51513 510 aaKnown RBP12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 DR1Q01658 176 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 MSLNQ13421 630 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 TUBB2AQ13885 445 aa12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 DHX34Q14147 1143 aaKnown RBP12.67□□□□□ -0.38
TRAPPC1-206ENST00000573989 ALG11Q2TAA5 492 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms